Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.5e-29 131.7 72 100.0
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.1e-26 120.9 59 96.6
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.1e-26 120.9 59 96.6
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 1.8e-25 119.4 67 94.0
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.7e-24 114.4 65 93.8
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.8e-22 109.4 56 92.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.5e-19 99.0 70 80.0
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.6e-18 96.3 69 78.3
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 3.6e-18 95.1 51 82.4
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.7e-18 94.7 54 81.5
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 6.2e-18 94.4 70 72.9
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.8e-17 90.9 51 78.4
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 1.2e-16 90.1 57 77.2
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 2.6e-16 89.0 57 75.4
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 2.6e-16 89.0 57 75.4
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.4e-16 88.6 67 67.2
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 3.4e-16 88.6 52 76.9
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.4e-16 88.6 67 67.2
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.4e-16 88.6 70 71.4
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 5.8e-16 87.8 55 74.5
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.5e-16 87.4 66 65.2
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.5e-16 87.4 72 66.7
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 9.8e-16 87.0 66 66.7
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.3e-15 86.7 72 61.1
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.2e-15 85.9 72 63.9
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.9e-15 85.5 55 72.7
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.7e-15 85.1 49 81.6
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 4.9e-15 84.7 49 79.6
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.9e-15 84.7 70 58.6
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 6.4e-15 84.3 63 68.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 8.3e-15 84.0 55 72.7
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.3e-15 84.0 58 65.5
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 8.3e-15 84.0 65 75.4
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-14 83.6 65 66.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.4e-14 83.2 51 76.5
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.9e-14 82.8 52 75.0
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 2.4e-14 82.4 70 61.4
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 7.0e-14 80.9 67 59.7
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 7.0e-14 80.9 50 74.0
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 9.2e-14 80.5 51 70.6
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 1.2e-13 80.1 63 65.1
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.2e-13 80.1 52 73.1
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 1.2e-13 80.1 57 64.9
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.0e-13 79.3 87 51.7
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 2.0e-13 79.3 43 86.0
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 3.5e-13 78.6 53 75.5
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.6e-13 78.2 54 70.4
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 6.0e-13 77.8 53 67.9
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 7.8e-13 77.4 57 66.7
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.3e-12 76.6 49 65.3
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.3e-12 76.6 48 68.8
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 1.3e-12 76.6 49 73.5
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.7e-12 76.3 48 72.9
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 1.7e-12 76.3 47 76.6
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.7e-12 76.3 59 57.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 2.3e-12 75.9 47 70.2
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.0e-12 75.5 49 67.3
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 3.9e-12 75.1 49 73.5
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 3.9e-12 75.1 61 65.6
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 3.9e-12 75.1 61 65.6
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.1e-11 73.6 49 73.5
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.1e-11 73.6 47 70.2
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-11 73.2 68 55.9
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 1.5e-11 73.2 49 63.3
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.5e-11 73.2 59 64.4
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.5e-11 73.2 46 71.7
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.5e-11 73.2 47 70.2
vmacro02691 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-11 73.2 72 55.6
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-11 73.2 48 66.7
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.9e-11 72.8 51 64.7
Ca_23081_v3 Cicer arietinum L. HOM05D002879 ORTHO05D002930 2.5e-11 72.4 48 70.8
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-11 72.0 45 73.3
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.3e-11 72.0 54 63.0
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 4.3e-11 71.6 44 75.0
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.3e-11 70.9 48 68.8
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.3e-11 70.9 54 63.0
Rhsim13G0037600 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.3e-11 70.9 75 53.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 9.5e-11 70.5 50 62.0
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 9.5e-11 70.5 63 63.5
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-10 70.1 54 63.0
vmacro02690 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-10 70.1 49 71.4
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.2e-10 70.1 48 68.8
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 1.6e-10 69.7 49 65.3
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.6e-10 69.7 45 66.7
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 2.1e-10 69.3 50 64.0
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.1e-10 69.3 55 65.5
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.1e-10 69.3 44 70.5
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 2.1e-10 69.3 50 70.0
HPP92_009298 Vanilla planifolia HOM05D002879 ORTHO05D002930 2.1e-10 69.3 53 66.0
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 2.8e-10 68.9 49 63.3
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.8e-10 68.9 43 74.4
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.8e-10 68.9 53 66.0
Sed0017062 Sechium edule HOM05D002879 ORTHO05D002930 2.8e-10 68.9 49 67.3
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-10 68.9 48 66.7
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.7e-10 68.2 44 70.5
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 4.7e-10 68.2 44 70.5
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.7e-10 68.2 57 63.2
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 6.2e-10 67.8 55 61.8
Nitab4.5_0001187g0080 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.2e-10 67.8 48 68.8
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.2e-10 67.8 54 57.4
CiPaw.15G015000 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.4e-09 66.6 72 55.6
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.4e-09 66.6 45 66.7
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.8e-09 66.2 45 64.4
Oeu046047.1 Olea europaea HOM05D002879 ORTHO05D002930 2.3e-09 65.9 44 68.2
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 3.1e-09 65.5 53 64.2
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.1e-09 65.5 44 70.5
AUR62014500 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-09 65.1 64 53.1
AUR62038035 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-09 65.1 64 53.1
AUR62038038 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.0e-09 65.1 64 53.1
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.2e-09 64.7 60 53.3
AUR62026686 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.8e-09 64.3 52 57.7
Os01g0959100 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 6.8e-09 64.3 40 67.5
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.8e-09 64.3 44 63.6
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.8e-09 64.3 44 63.6
Actinidia04758 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.5e-08 63.2 66 54.5
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.5e-08 63.2 47 66.0
vmacro02689 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.5e-08 63.2 47 66.0
Sc02g0003910 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.0e-08 62.8 48 62.5
EL10Ac1g00648 Beta vulgaris HOM05D002879 ORTHO05D002930 2.6e-08 62.4 57 61.4
AUR62035549 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.6e-08 62.4 49 63.3
AUR62038034 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.6e-08 62.4 49 63.3
AUR62038037 Chenopodium quinoa HOM05D002879 ORTHO05D002930 2.6e-08 62.4 49 63.3
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 2.6e-08 62.4 54 61.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.6e-08 62.4 53 62.3
Actinidia29537 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.4e-08 62.0 66 54.5
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 3.4e-08 62.0 61 50.8
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.4e-08 62.0 48 60.4
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.4e-08 62.0 39 69.2
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.4e-08 61.6 53 60.4
AUR62014501 Chenopodium quinoa HOM05D002879 ORTHO05D002930 5.8e-08 61.2 49 63.3
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 5.8e-08 61.2 53 56.6
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 5.8e-08 61.2 52 57.7
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 7.5e-08 60.8 49 61.2
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 7.5e-08 60.8 53 60.4
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.5e-08 60.8 49 61.2
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 7.5e-08 60.8 49 61.2
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 7.5e-08 60.8 53 58.5
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 9.9e-08 60.5 94 39.4
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 1.3e-07 60.1 45 60.0
Zm00001eb263060 Zea mays HOM05D002879 ORTHO05D002930 2.2e-07 59.3 47 57.4
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 2.9e-07 58.9 49 61.2
Lsat_1_v5_gn_9_41200 Lactuca sativa HOM05D002879 ORTHO05D002930 2.9e-07 58.9 47 59.6
Medtr0583s0010 Medicago truncatula HOM05D002879 ORTHO05D002930 2.9e-07 58.9 72 59.7
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.9e-07 58.9 54 53.7
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 3.7e-07 58.5 50 60.0
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 3.7e-07 58.5 55 56.4
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.9e-07 58.2 43 62.8
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.9e-07 58.2 53 58.5
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 4.9e-07 58.2 47 57.4
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.4e-07 57.8 57 56.1
Zm00001eb362480 Zea mays HOM05D002879 ORTHO05D002930 8.3e-07 57.4 46 56.5
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-06 57.0 53 56.6
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-06 56.6 51 56.9
SEGI_23588 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.4e-06 56.6 81 44.4
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.9e-06 56.2 57 54.4
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.4e-06 55.8 57 54.4
EL10Ac1g01574 Beta vulgaris HOM05D002879 ORTHO05D002930 4.1e-06 55.1 59 49.2
COL.COLO4_29859 Corchorus olitorius HOM05D002879 ORTHO05D002930 4.1e-06 55.1 46 60.9
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.1e-06 55.1 53 54.7
SMO351G0439 Selaginella moellendorffii HOM05D002879 ORTHO05D002930 7.1e-06 54.3 48 56.2
QL02p029894 Quercus lobata HOM05D002255 ORTHO05D002288 9.2e-06 53.9 53 54.7
TWI34G0839 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 9.2e-06 53.9 50 58.0


User provided reference genes

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