Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G264.20 Capsicum annuum HOM05D026608 ORTHO05D024810 7.9e-58 226.9 112 100.0
CAN.G58.43 Capsicum annuum HOM05D026608 ORTHO05D024810 2.5e-43 178.7 111 81.1
CAN.G68.11 Capsicum annuum HOM05D026608 ORTHO05D024810 1.9e-40 169.1 110 77.3
CAN.G93.20 Capsicum annuum HOM05D026608 ORTHO05D024810 9.4e-35 150.2 111 73.0
CAN.G1592.3 Capsicum annuum HOM05D000159 ORTHO05D000148 3.2e-27 125.2 150 51.3
Peaxi162Scf00426g00007 Petunia axillaris HOM05D000159 ORTHO05D000148 3.3e-16 88.6 145 41.4
Sopen03g033930 Solanum pennellii HOM05D000159 ORTHO05D000148 2.8e-15 85.5 152 41.4
Nitab4.5_0009912g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.4e-14 83.2 137 41.6
Nitab4.5_0002467g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.2e-13 80.1 183 35.0
PGSC0003DMG400024527 Solanum tuberosum HOM05D000159 ORTHO05D000148 3.5e-13 78.6 151 41.1
Dinv31030 Davidia involucrata HOM05D000159 ORTHO05D000148 7.2e-11 70.9 138 37.0
Dinv31073 Davidia involucrata HOM05D000159 ORTHO05D000148 7.2e-11 70.9 138 37.0
Dinv17446 Davidia involucrata HOM05D000159 ORTHO05D000148 1.2e-10 70.1 158 34.8
CSS0017258 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 3.6e-10 68.6 137 38.0
CsaV3_1G003380 Cucumis sativus L. HOM05D000159 ORTHO05D000148 3.0e-09 65.5 138 35.5
ClCG06G015490 Citrullus lanatus HOM05D000159 ORTHO05D000148 6.8e-09 64.3 126 36.5
MD06G1204000 Malus domestica HOM05D000159 ORTHO05D000148 8.8e-09 63.9 147 34.7
Glyma.05G019000 Glycine max HOM05D000159 ORTHO05D000148 4.4e-08 61.6 150 34.7
Prupe.5G208300 Prunus persica HOM05D000159 ORTHO05D000148 4.4e-08 61.6 138 34.8
VMungo1215G2252 Vigna mungo HOM05D000159 ORTHO05D000148 4.4e-08 61.6 150 35.3
Glyma.04G159600 Glycine max HOM05D000159 ORTHO05D000148 5.7e-08 61.2 138 34.1
Nitab4.5_0010172g0010 Nicotiana tabacum HOM05D000159 ORTHO05D000148 5.7e-08 61.2 118 38.1
Sed0021567 Sechium edule HOM05D000159 ORTHO05D000148 5.7e-08 61.2 142 35.2
Sed0012987 Sechium edule HOM05D000159 ORTHO05D000148 9.8e-08 60.5 132 34.8
MD14G1215300 Malus domestica HOM05D000159 ORTHO05D000148 1.3e-07 60.1 138 34.1
COL.COLO4_24296 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.7e-07 59.7 125 35.2
Phvul.003G182900 Phaseolus vulgaris HOM05D000159 ORTHO05D000148 1.7e-07 59.7 150 35.3
Thecc.03G106000 Theobroma cacao HOM05D000159 ORTHO05D000148 1.7e-07 59.7 138 34.1
Duzib205G0956 Durio zibethinus HOM05D000159 ORTHO05D000148 3.7e-07 58.5 126 34.9
PGSC0003DMG400023260 Solanum tuberosum HOM05D000159 ORTHO05D000148 3.7e-07 58.5 118 38.1
Nn3g17511 Nelumbo nucifera HOM05D000159 ORTHO05D000148 4.8e-07 58.2 126 35.7
Duzib068G0346 Durio zibethinus HOM05D000159 ORTHO05D000148 8.3e-07 57.4 150 32.7
CSS0016212 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.1e-06 57.0 130 35.4
Ciclev10019546m.g Citrus clementina HOM05D000159 ORTHO05D000148 1.4e-06 56.6 124 32.3
Gohir.A03G071200 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.4e-06 56.6 126 34.1
Gohir.D03G097700 Gossypium hirsutum HOM05D000159 ORTHO05D000148 1.4e-06 56.6 126 34.1
Gorai.003G102800 Gossypium raimondii HOM05D000159 ORTHO05D000148 1.4e-06 56.6 126 34.1
Lalb_Chr13g0302751 Lupinus albus HOM05D000159 ORTHO05D000148 1.4e-06 56.6 122 34.4
Medtr4g109770 Medicago truncatula HOM05D000159 ORTHO05D000148 1.8e-06 56.2 142 34.5
Peaxi162Scf00365g00310 Petunia axillaris HOM05D000159 ORTHO05D000148 1.8e-06 56.2 120 37.5
Atru.chr11.1593 Acer truncatum HOM05D000159 ORTHO05D000148 2.4e-06 55.8 127 36.2
Lalb_Chr07g0178391 Lupinus albus HOM05D000159 ORTHO05D000148 2.4e-06 55.8 122 34.4
Manes.14G088200 Manihot esculenta HOM05D000159 ORTHO05D000148 3.1e-06 55.5 125 35.2
PGR044G1979 Punica granatum HOM05D000159 ORTHO05D000148 3.1e-06 55.5 138 34.1
CSS0046901 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 4.1e-06 55.1 137 32.8
CiPaw.11G056200 Carya illinoinensis HOM05D000159 ORTHO05D000148 4.1e-06 55.1 128 35.2
CiPaw.12G010000 Carya illinoinensis HOM05D000159 ORTHO05D000148 4.1e-06 55.1 126 34.1
vmacro16482 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 4.1e-06 55.1 125 36.0
Nn4g23499 Nelumbo nucifera HOM05D000159 ORTHO05D000148 5.4e-06 54.7 125 34.4
Cfa019362 Carpinus fangiana HOM05D000159 ORTHO05D000148 7.0e-06 54.3 140 32.9
Eucgr.B00631 Eucalyptus grandis HOM05D000159 ORTHO05D000148 7.0e-06 54.3 157 31.2
Glyma.06G205701 Glycine max HOM05D000159 ORTHO05D024810 7.0e-06 54.3 41 70.7
RcHm_v2.0_Chr7g0183501 Rosa chinensis HOM05D000159 ORTHO05D000148 7.0e-06 54.3 138 34.8


User provided reference genes

Program Settings