Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G262.7 Capsicum annuum HOM05D007371 ORTHO05D009319 9.3e-57 223.4 120 100.0
CAN.G1526.6 Capsicum annuum HOM05D007371 ORTHO05D009319 5.0e-50 201.1 119 90.8
CAN.G278.2 Capsicum annuum HOM05D007371 ORTHO05D009319 5.0e-50 201.1 119 90.8
CAN.G939.5 Capsicum annuum HOM05D007371 ORTHO05D009319 5.0e-50 201.1 119 90.8
CAN.G965.5 Capsicum annuum HOM05D007371 ORTHO05D009319 4.6e-48 194.5 119 88.2
Solyc03g013600.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 6.1e-48 194.1 119 87.4
DCAR_032539 Daucus carota HOM05D007371 ORTHO05D009319 4.3e-46 188.0 119 84.0
SalBow1G7973 Salvia bowleyana HOM05D007371 ORTHO05D009319 2.8e-45 185.3 119 83.2
CAN.G256.22 Capsicum annuum HOM05D007371 ORTHO05D009319 3.7e-45 184.9 119 85.7
Migut.D01251 Erythranthe guttata HOM05D007371 ORTHO05D009319 9.1e-44 180.3 119 82.4
Solyc02g011770.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 2.6e-43 178.7 119 83.2
Gohir.1Z049431 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.5e-43 177.9 119 79.0
Gohir.1Z049679 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.5e-43 177.9 119 79.0
Gohir.A02G134600 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.5e-43 177.9 119 79.0
Gohir.D04G175100 Gossypium hirsutum HOM05D007371 ORTHO05D009319 4.5e-43 177.9 119 79.0
Nn064s42209 Nelumbo nucifera HOM05D007371 ORTHO05D009319 4.5e-43 177.9 119 79.8
Lj2P1238T112 Lonicera japonica HOM05D007371 ORTHO05D009319 5.9e-43 177.6 119 81.5
Lju5009P0T52 Lonicera japonica HOM05D007371 ORTHO05D009319 5.9e-43 177.6 119 81.5
Gohir.A09G046246 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.3e-42 176.4 119 78.2
Lj9P89T22 Lonicera japonica HOM05D007371 ORTHO05D009319 1.3e-42 176.4 119 80.7
Nn3g20215 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.7e-42 176.0 119 79.0
Peaxi162Scf00338g00628 Petunia axillaris HOM05D007371 ORTHO05D009319 1.7e-42 176.0 106 87.7
PGR111G0032 Punica granatum HOM05D007371 ORTHO05D009319 1.9e-41 172.6 119 78.2
TAR625G0296 Trochodendron aralioides HOM05D007371 ORTHO05D009319 4.2e-41 171.4 119 78.2
Lalb_Chr07g0191781 Lupinus albus HOM05D007371 ORTHO05D009319 9.4e-41 170.2 119 77.3
Nn1g08633 Nelumbo nucifera HOM05D007371 ORTHO05D009319 9.4e-41 170.2 119 75.6
HanXRQChr00c0289g0573141 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQChr02g0059721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQChr09g0258501 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQChr15g0465431 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQChr15g0465461 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQChr17g0569751 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
HanXRQCPg0580341 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-40 169.1 119 78.2
RcHm_v2.0_Chr5g0017201 Rosa chinensis HOM05D007371 ORTHO05D009319 7.9e-40 167.2 119 75.6
RcHm_v2.0_CPg0502761 Rosa chinensis HOM05D007371 ORTHO05D009319 7.9e-40 167.2 119 75.6
RcHm_v2.0_Chr5g0043021 Rosa chinensis HOM05D007371 ORTHO05D009319 1.0e-39 166.8 119 74.8
PSO548G0046 Papaver somniferum HOM05D007371 ORTHO05D009319 5.1e-39 164.5 119 74.8
Solyc07g026910.3 Solanum lycopersicum HOM05D007371 ORTHO05D009319 1.5e-38 162.9 103 86.4
Medtr4g006110 Medicago truncatula HOM05D007371 ORTHO05D009319 2.0e-38 162.5 119 74.8
Medtr6g042220 Medicago truncatula HOM05D007371 ORTHO05D009319 2.0e-38 162.5 119 74.8
C09p24650 Brassica napus HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
C09p40180 Brassica napus HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BolC2t10597H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BolSC29t60507H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BolSC29t60622H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BolSC37t60794H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BolSC47t61064H Brassica oleracea HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BraA10t43431Z Brassica rapa HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BraSC103t45430Z Brassica rapa HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BraSC143t45659Z Brassica rapa HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.9
BraSC179t45773Z Brassica rapa HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
BraSC59t46552Z Brassica rapa HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 73.1
Medtr5g063410 Medicago truncatula HOM05D007371 ORTHO05D009319 5.7e-38 161.0 119 74.8
Medtr7g021710 Medicago truncatula HOM05D007371 ORTHO05D009319 7.4e-38 160.6 119 73.9
ATCG01080 Arabidopsis thaliana HOM05D007371 ORTHO05D009319 1.7e-37 159.5 119 71.4
Potri.013G075100 Populus trichocarpa HOM05D007371 ORTHO05D009319 1.7e-37 159.5 114 74.6
AL9U11956 Arabidopsis lyrata HOM05D007371 ORTHO05D009319 4.8e-37 157.9 119 71.4
CARHR282450 Cardamine hirsuta HOM05D007371 ORTHO05D009319 1.1e-36 156.8 119 71.4
BolC9t56922H Brassica oleracea HOM05D007371 ORTHO05D009319 9.1e-36 153.7 119 69.7
BolSC45t60908H Brassica oleracea HOM05D007371 ORTHO05D009319 1.7e-34 149.4 108 73.1
BolSC29t60547H Brassica oleracea HOM05D007371 ORTHO05D009319 8.5e-34 147.1 107 72.9
BolSC35t60691H Brassica oleracea HOM05D007371 ORTHO05D009319 8.5e-34 147.1 107 72.9
BolSC46t60957H Brassica oleracea HOM05D007371 ORTHO05D009319 8.5e-34 147.1 107 72.9
BolSC56t61236H Brassica oleracea HOM05D007371 ORTHO05D009319 8.5e-34 147.1 107 72.9
HanXRQChr17g0569721 Helianthus annuus HOM05D007371 ORTHO05D009319 2.5e-33 145.6 102 77.5
Glyma.19G081000 Glycine max HOM05D007371 ORTHO05D009319 4.2e-33 144.8 100 78.0
BolSC49t61144H Brassica oleracea HOM05D007371 ORTHO05D009319 4.4e-30 134.8 99 72.7
Gohir.D12G089301 Gossypium hirsutum HOM05D007371 ORTHO05D009319 6.3e-29 131.0 94 73.4
Solyc11g021217.1 Solanum lycopersicum HOM05D007371 ORTHO05D009319 8.2e-29 130.6 90 80.0
Hma1.2p1_0656F.1_g196806 Hydrangea macrophylla HOM05D007371 ORTHO05D009319 1.8e-28 129.4 83 84.3
Gorai.013G109900 Gossypium raimondii HOM05D007371 ORTHO05D009319 1.7e-26 122.9 84 76.2
BolC2t10612H Brassica oleracea HOM05D007371 ORTHO05D009319 1.9e-25 119.4 84 76.2
BraSC138t45534Z Brassica rapa HOM05D007371 ORTHO05D009319 4.2e-25 118.2 109 63.3
Gohir.D06G133700 Gossypium hirsutum HOM05D007371 ORTHO05D009319 7.2e-25 117.5 103 65.0
HanXRQChr01g0000251 Helianthus annuus HOM05D007371 ORTHO05D009319 6.7e-23 110.9 81 77.8
arahy.Tifrunner.gnm1.ann1.5E4H9C Arachis hypogaea HOM05D007371 ORTHO05D009319 5.7e-22 107.8 83 71.1
HanXRQChr00c0703g0576941 Helianthus annuus HOM05D007371 ORTHO05D009319 3.7e-21 105.1 77 77.9
C02p24280 Brassica napus HOM05D007371 ORTHO05D009319 4.8e-21 104.8 100 61.0
HanXRQChr02g0037971 Helianthus annuus HOM05D007371 ORTHO05D009319 1.6e-16 89.7 83 65.1
Lalb_Chr09g0335451 Lupinus albus HOM05D007371 ORTHO05D009319 2.1e-16 89.4 65 73.8
Gohir.D02G169550 Gossypium hirsutum HOM05D007371 ORTHO05D009319 2.0e-14 82.8 57 70.2
BolC7t43856H Brassica oleracea HOM05D007371 ORTHO05D009319 9.8e-14 80.5 56 71.4
HanXRQChr11g0323761 Helianthus annuus HOM05D007371 ORTHO05D009319 2.2e-13 79.3 90 60.0
Gorai.005G189900 Gossypium raimondii HOM05D007371 ORTHO05D009319 3.7e-13 78.6 57 68.4
Aa31LG5G21710 Aethionema arabicum HOM05D007371 ORTHO05D009319 6.3e-13 77.8 85 60.0
Nitab4.5_0007979g0070 Nicotiana tabacum HOM05D007371 ORTHO05D009319 1.1e-12 77.0 47 85.1
Medtr0002s0160 Medicago truncatula HOM05D000533 ORTHO05D006151 3.1e-12 75.5 60 66.7
Nn031s41614 Nelumbo nucifera HOM05D007371 ORTHO05D009319 1.0e-10 70.5 41 78.0
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 2.9e-10 68.9 48 77.1
Thecc.08G131100 Theobroma cacao HOM05D007371 ORTHO05D009319 2.9e-10 68.9 41 75.6
HanXRQChr00c0336g0573671 Helianthus annuus HOM05D007371 ORTHO05D009319 1.5e-09 66.6 41 78.0
HanXRQChr05g0152451 Helianthus annuus HOM05D007371 ORTHO05D009319 1.5e-09 66.6 41 78.0
HanXRQChr08g0211951 Helianthus annuus HOM05D007371 ORTHO05D009319 1.5e-09 66.6 41 78.0
SMO086G0016 Selaginella moellendorffii HOM05D007371 ORTHO05D009319 9.5e-09 63.9 119 42.0
Gohir.A03G146201 Gossypium hirsutum HOM05D007371 ORTHO05D009319 1.2e-08 63.5 97 41.2
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 1.6e-08 63.2 45 68.9
arahy.Tifrunner.gnm1.ann1.UDKX9E Arachis hypogaea HOM05D000890 ORTHO05D000697 2.1e-08 62.8 41 73.2
HanXRQChr02g0038001 Helianthus annuus HOM05D007371 ORTHO05D009319 2.1e-08 62.8 61 62.3
Lalb_Chr11g0071331 Lupinus albus HOM05D007371 ORTHO05D009319 4.7e-08 61.6 70 54.3
Haze_02268 Corylus avellana HOM05D007371 ORTHO05D009319 8.9e-07 57.4 42 71.4
C09p40330 Brassica napus HOM05D007371 ORTHO05D009319 2.0e-06 56.2 41 68.3
BolSC35t60705H Brassica oleracea HOM05D007371 ORTHO05D009319 2.0e-06 56.2 41 68.3
BraSC25t45911Z Brassica rapa HOM05D007371 ORTHO05D009319 2.0e-06 56.2 41 68.3
BraSC58t46462Z Brassica rapa HOM05D007371 ORTHO05D009319 2.0e-06 56.2 41 68.3


User provided reference genes

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