Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 1.9e-26 121.7 60 100.0
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 2.5e-18 94.7 52 92.3
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 3.3e-18 94.4 52 92.3
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 3.3e-18 94.4 52 92.3
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 3.3e-18 94.4 52 92.3
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 3.3e-18 94.4 52 92.3
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 3.3e-18 94.4 52 92.3
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 1.2e-17 92.4 52 90.4
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 1.2e-17 92.4 52 90.4
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-16 89.4 52 88.5
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 2.3e-16 88.2 58 77.6
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 1.9e-13 78.6 53 77.4
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 7.1e-13 76.6 52 75.0
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 3.5e-12 74.3 52 73.1
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 6.0e-12 73.6 51 76.5
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 7.8e-12 73.2 51 74.5
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 7.8e-12 73.2 51 74.5
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 7.8e-12 73.2 51 74.5
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.0e-11 72.8 51 76.5
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 1.0e-11 72.8 51 76.5
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.7e-11 72.0 51 74.5
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 2.3e-11 71.6 53 67.9
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 2.3e-11 71.6 53 67.9
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 2.3e-11 71.6 53 67.9
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 3.0e-11 71.2 51 72.5
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 3.9e-11 70.9 53 73.6
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 5.1e-11 70.5 53 71.7
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 5.1e-11 70.5 51 72.5
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 5.1e-11 70.5 54 68.5
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 6.6e-11 70.1 52 67.3
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 8.6e-11 69.7 52 67.3
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 8.6e-11 69.7 52 67.3
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 8.6e-11 69.7 55 69.1
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 8.6e-11 69.7 54 64.8
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 1.5e-10 68.9 52 67.3
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.9e-10 68.6 51 68.6
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 2.5e-10 68.2 52 75.0
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 2.5e-10 68.2 53 64.2
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 3.3e-10 67.8 53 71.7
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 3.3e-10 67.8 54 61.1
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 4.3e-10 67.4 52 65.4
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 5.6e-10 67.0 52 67.3
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 5.6e-10 67.0 44 79.5
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 5.6e-10 67.0 52 65.4
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 1.6e-09 65.5 53 66.0
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 3.6e-09 64.3 45 71.1
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 8.1e-09 63.2 48 64.6
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 1.4e-08 62.4 54 59.3
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 2.3e-08 61.6 48 64.6
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 4.0e-08 60.8 49 67.3
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 8.9e-08 59.7 56 58.9
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 4.4e-07 57.4 49 67.3
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 2.2e-06 55.1 46 63.0


User provided reference genes

Program Settings