Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 7.0e-209 730.3 360 100.0
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 5.8e-187 657.5 360 90.0
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 2.8e-181 638.6 360 87.5
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.9e-178 628.6 360 86.4
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.4e-172 609.0 361 83.7
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 6.7e-167 590.9 351 82.3
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 7.2e-129 464.5 345 64.3
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 1.6e-128 463.4 349 63.6
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.2e-126 457.2 347 64.3
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 4.4e-126 455.3 349 63.9
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 5.7e-126 454.9 347 64.6
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.1e-124 450.7 347 63.4
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 1.4e-124 450.3 353 61.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.4e-124 449.5 345 62.3
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 7.7e-123 444.5 345 63.2
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 1.0e-122 444.1 349 63.0
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 5.0e-122 441.8 349 62.2
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 8.5e-122 441.0 365 58.1
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-120 437.2 352 60.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 1.2e-120 437.2 345 62.0
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.6e-120 436.8 347 61.7
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 2.7e-120 436.0 370 59.2
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 8.0e-120 434.5 347 62.2
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 1.0e-119 434.1 347 61.1
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 1.4e-119 433.7 347 60.5
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-119 433.7 332 62.0
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-119 433.7 332 62.0
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.4e-119 433.7 347 61.7
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 3.0e-119 432.6 349 60.5
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 4.0e-119 432.2 347 60.5
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 4.0e-119 432.2 347 61.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 8.8e-119 431.0 347 62.5
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 8.8e-119 431.0 322 65.8
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 3.4e-118 429.1 351 60.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.4e-118 429.1 348 60.9
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 7.5e-118 427.9 350 57.7
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 9.8e-118 427.6 345 60.6
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 7.0e-116 421.4 347 59.1
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.2e-115 420.6 363 57.9
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.5e-115 419.1 350 58.0
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 4.5e-115 418.7 344 59.9
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 5.9e-115 418.3 347 57.9
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.7e-114 416.8 346 60.1
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 2.3e-114 416.4 350 57.7
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 3.8e-114 415.6 350 57.7
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 5.0e-114 415.2 347 58.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 1.5e-113 413.7 348 60.1
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 7.2e-113 411.4 266 78.9
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 2.1e-112 409.8 348 56.3
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 2.8e-112 409.5 355 58.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 4.7e-112 408.7 347 57.1
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 4.7e-112 408.7 332 60.2
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.4e-111 407.1 348 56.0
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.4e-111 407.1 342 57.9
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.3e-111 406.4 344 59.3
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 2.3e-111 406.4 347 58.2
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 4.0e-111 405.6 337 57.3
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 6.8e-111 404.8 348 55.5
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 8.9e-111 404.4 346 59.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 1.2e-110 404.1 348 58.3
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 3.4e-110 402.5 327 58.7
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 3.4e-110 402.5 347 56.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.4e-110 402.5 322 62.7
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 6.3e-109 398.3 346 55.5
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 6.3e-109 398.3 346 55.5
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.3e-109 398.3 347 57.9
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 1.8e-108 396.7 348 55.7
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 2.4e-108 396.4 344 58.4
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 7.0e-108 394.8 345 57.4
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 9.2e-108 394.4 348 54.3
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 2.0e-107 393.3 348 55.5
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.7e-107 392.9 347 56.8
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 2.7e-107 392.9 346 53.8
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 4.6e-107 392.1 347 54.5
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 5.9e-107 391.7 348 56.9
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.7e-106 390.2 363 55.6
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.3e-106 389.8 363 51.5
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 6.6e-106 388.3 324 60.5
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 6.6e-106 388.3 346 54.0
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 1.5e-105 387.1 377 51.7
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 5.6e-105 385.2 370 51.9
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 7.3e-105 384.8 328 57.6
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.0e-102 376.7 344 55.5
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.6e-102 376.3 277 63.9
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.4e-102 375.9 274 69.0
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.6e-99 365.5 266 67.3
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 7.8e-99 364.8 338 54.7
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 1.1e-97 360.9 252 69.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 2.5e-97 359.8 345 53.9
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 3.7e-93 345.9 349 51.9
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 9.2e-92 341.3 337 52.2
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 8.6e-90 334.7 314 55.7
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 2.5e-89 333.2 337 50.4
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 4.4e-86 322.4 347 50.4
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 1.7e-85 320.5 345 50.1
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 1.9e-84 317.0 306 54.9
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.6e-83 313.9 241 61.4
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.1e-83 313.5 285 56.8
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.1e-80 303.5 351 46.4
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 1.4e-76 290.8 253 57.7
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 6.4e-69 265.4 236 54.7
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 1.4e-68 264.2 210 62.4
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 3.9e-66 256.1 312 46.2
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 1.4e-60 237.7 217 56.7
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.9e-60 237.3 185 55.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 6.0e-59 232.3 333 39.9
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 3.7e-56 223.0 245 50.6
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.9e-41 174.1 130 60.0
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 1.8e-39 167.5 127 60.6
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 4.8e-32 142.9 100 66.0
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 8.2e-32 142.1 306 33.3
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 4.5e-30 136.3 144 47.9
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.1e-25 121.7 186 39.2
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.4e-15 88.2 70 58.6
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 1.6e-14 84.7 75 53.3
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 3.5e-14 83.6 84 52.4
CBR_g34612 Chara braunii HOM05D006965 ORTHO05D008652 1.0e-13 82.0 106 37.7


User provided reference genes

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