Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G260.6 Capsicum annuum HOM05D001148 ORTHO05D000960 2.1e-74 282.3 148 100.0
Solyc09g059570.3 Solanum lycopersicum HOM05D001148 ORTHO05D000960 3.2e-22 109.0 75 81.3
Sopen09g022750 Solanum pennellii HOM05D001148 ORTHO05D000960 3.2e-22 109.0 75 81.3
PGSC0003DMG400017494 Solanum tuberosum HOM05D001148 ORTHO05D000960 3.2e-22 109.0 75 81.3
Peaxi162Scf00238g00026 Petunia axillaris HOM05D001148 ORTHO05D000960 2.1e-21 106.3 75 80.0
Nitab4.5_0000345g0020 Nicotiana tabacum HOM05D001148 ORTHO05D000960 4.3e-19 98.6 86 69.8
Cc01_g16800 Coffea canephora HOM05D001148 ORTHO05D000960 1.1e-17 94.0 73 72.6
Dinv19182 Davidia involucrata HOM05D001148 ORTHO05D000960 1.4e-17 93.6 69 72.5
Hma1.2p1_0226F.1_g095460 Hydrangea macrophylla HOM05D001148 ORTHO05D000960 2.3e-17 92.8 75 69.3
CSS0006751 Camellia sinensis var. sinensis HOM05D001148 ORTHO05D000960 4.0e-17 92.0 80 63.8
CiPaw.01G049300 Carya illinoinensis HOM05D001148 ORTHO05D000960 7.5e-16 87.8 75 64.0
CiPaw.02G022700 Carya illinoinensis HOM05D001148 ORTHO05D000960 1.7e-15 86.7 81 61.7
Nitab4.5_0000045g0410 Nicotiana tabacum HOM05D001148 ORTHO05D000960 1.7e-15 86.7 75 69.3
GSVIVG01003255001 Vitis vinifera HOM05D001148 ORTHO05D000960 2.9e-15 85.9 75 61.3
SalBow3G2166 Salvia bowleyana HOM05D001148 ORTHO05D000960 4.9e-15 85.1 71 67.6
Potri.002G245300 Populus trichocarpa HOM05D001148 ORTHO05D000960 2.4e-14 82.8 75 60.0
TAR362G1309 Trochodendron aralioides HOM05D001148 ORTHO05D000960 2.4e-14 82.8 71 66.2
MSTRG.17998 Avicennia marina HOM05D001148 ORTHO05D000960 1.6e-13 80.1 73 61.6
SalBow6G1794 Salvia bowleyana HOM05D001148 ORTHO05D000960 2.1e-13 79.7 75 62.7
SalBow6G4344 Salvia bowleyana HOM05D001148 ORTHO05D000960 2.1e-13 79.7 75 62.7
SGA_v2.0_scaffold18G08330 Striga asiatica HOM05D001148 ORTHO05D000960 2.1e-13 79.7 86 55.8
Aqoxy2G03903 Aquilegia oxysepala HOM05D001148 ORTHO05D000960 2.7e-13 79.3 73 61.6
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 6.0e-13 78.2 75 61.3
TAR365G1065 Trochodendron aralioides HOM05D001148 ORTHO05D000960 7.8e-13 77.8 92 52.2
TWI75G1294 Tripterygium wilfordii HOM05D001148 ORTHO05D000960 1.7e-12 76.6 79 53.2
DCAR_012661 Daucus carota HOM05D001148 ORTHO05D000960 2.3e-12 76.3 75 60.0
Hma1.2p1_0149F.1_g066340 Hydrangea macrophylla HOM05D001148 ORTHO05D000960 2.3e-12 76.3 82 56.1
Cfa004374 Carpinus fangiana HOM05D001148 ORTHO05D000960 3.9e-12 75.5 75 58.7
FAN15G0721 Fragaria x ananassa HOM05D001148 ORTHO05D000960 2.5e-11 72.8 73 56.2
CsaV3_3G029990 Cucumis sativus L. HOM05D001148 ORTHO05D000960 3.3e-11 72.4 75 54.7
PSO063G6769 Papaver somniferum HOM05D001148 ORTHO05D000960 3.3e-11 72.4 71 57.7
PSO017G6073 Papaver somniferum HOM05D001148 ORTHO05D000960 1.6e-10 70.1 71 56.3
unitig_746.g26590 Utricularia gibba HOM05D001148 ORTHO05D000960 1.6e-10 70.1 73 52.1
CDE05G1151 Ceratophyllum demersum HOM05D001148 ORTHO05D000960 2.1e-10 69.7 84 53.6
unitig_899.g15415 Utricularia gibba HOM05D001148 ORTHO05D000960 2.1e-10 69.7 73 53.4
Migut.D02498 Erythranthe guttata HOM05D001148 ORTHO05D000960 3.6e-10 68.9 75 58.7
AUR62001120 Chenopodium quinoa HOM05D001148 ORTHO05D000960 4.7e-10 68.6 82 50.0
vmacro02778 Vaccinium macrocarpon HOM05D001148 ORTHO05D000960 4.7e-10 68.6 75 53.3
RcHm_v2.0_Chr6g0284221 Rosa chinensis HOM05D001148 ORTHO05D000960 6.2e-10 68.2 73 52.1
QL09p051828 Quercus lobata HOM05D001148 ORTHO05D000960 1.8e-09 66.6 75 53.3
QL09p052606 Quercus lobata HOM05D001148 ORTHO05D000960 1.8e-09 66.6 75 53.3
QL09p052719 Quercus lobata HOM05D001148 ORTHO05D000960 1.8e-09 66.6 75 53.3
Lalb_Chr01g0022251 Lupinus albus HOM05D001148 ORTHO05D000960 3.1e-09 65.9 72 55.6
VMungo0331G0409 Vigna mungo HOM05D001148 ORTHO05D000960 3.1e-09 65.9 51 68.6
Eucgr.H00780 Eucalyptus grandis HOM05D001148 ORTHO05D000960 4.0e-09 65.5 56 62.5
CANSAT01G1967 Cannabis sativa HOM05D001148 ORTHO05D000960 8.9e-09 64.3 75 53.3
Oeu031827.1 Olea europaea HOM05D001148 ORTHO05D000960 1.5e-08 63.5 75 53.3
Nn1g07937 Nelumbo nucifera HOM05D001148 ORTHO05D000960 2.0e-08 63.2 72 54.2
Gohir.D07G206200 Gossypium hirsutum HOM05D001148 ORTHO05D000960 2.6e-08 62.8 75 49.3
Gorai.001G232500 Gossypium raimondii HOM05D001148 ORTHO05D000960 3.4e-08 62.4 75 49.3
Phvul.010G021100 Phaseolus vulgaris HOM05D001148 ORTHO05D000960 3.4e-08 62.4 75 49.3
MELO3C022712.2 Cucumis melo HOM05D001148 ORTHO05D000960 5.8e-08 61.6 75 46.7
QL09p052518 Quercus lobata HOM05D001148 ORTHO05D000960 7.6e-08 61.2 75 50.7
Thecc.01G221800 Theobroma cacao HOM05D001148 ORTHO05D000960 2.9e-07 59.3 75 48.0
Lj1A88T39 Lonicera japonica HOM05D001148 ORTHO05D000960 3.8e-07 58.9 59 59.3
HPP92_013553 Vanilla planifolia HOM05D001148 ORTHO05D000960 3.8e-07 58.9 73 46.6
Phvul.008G130500 Phaseolus vulgaris HOM05D001148 ORTHO05D000960 4.9e-07 58.5 40 75.0
Gohir.D08G212656 Gossypium hirsutum HOM05D001148 ORTHO05D000960 6.4e-07 58.2 75 48.0
Gorai.004G226500 Gossypium raimondii HOM05D001148 ORTHO05D000960 6.4e-07 58.2 75 48.0
MSTRG.18840 Avicennia marina HOM05D001148 ORTHO05D000960 8.4e-07 57.8 72 50.0
Ca_24092_v3 Cicer arietinum L. HOM05D001148 ORTHO05D000960 1.9e-06 56.6 72 47.2
Manes.12G046700 Manihot esculenta HOM05D001148 ORTHO05D000960 1.9e-06 56.6 75 44.0
Gohir.A08G195200 Gossypium hirsutum HOM05D001148 ORTHO05D000960 2.4e-06 56.2 75 46.7
Lalb_Chr03g0041551 Lupinus albus HOM05D001148 ORTHO05D000960 2.4e-06 56.2 38 73.7
VMungo1383G3571 Vigna mungo HOM05D001148 ORTHO05D000960 2.4e-06 56.2 40 72.5
TPR.G6415 Trifolium pratense HOM05D001148 ORTHO05D000960 3.2e-06 55.8 39 71.8
Lj1g0009415 Lotus japonicus HOM05D001148 ORTHO05D000960 4.2e-06 55.5 70 50.0
MD10G1160700 Malus domestica HOM05D001148 ORTHO05D000960 5.4e-06 55.1 72 48.6
arahy.Tifrunner.gnm1.ann1.AQ7EBY Arachis hypogaea HOM05D001148 ORTHO05D000960 7.1e-06 54.7 38 73.7
EL10Ac7g17879 Beta vulgaris HOM05D001148 ORTHO05D000960 7.1e-06 54.7 43 65.1
COL.COLO4_15640 Corchorus olitorius HOM05D001148 ORTHO05D000960 9.2e-06 54.3 75 44.0
Prupe.8G199900 Prunus persica HOM05D001148 ORTHO05D000960 9.2e-06 54.3 40 70.0


User provided reference genes

Program Settings