Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 5.9e-100 367.5 176 100.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 3.6e-73 278.5 165 80.6
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.6e-68 263.1 173 73.4
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 5.9e-68 261.2 173 72.8
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 2.3e-64 249.2 173 70.5
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 2.6e-63 245.7 173 69.9
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 9.8e-63 243.8 173 68.2
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 7.3e-50 201.1 168 58.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.0e-47 193.0 168 57.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.0e-47 193.0 168 57.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 3.7e-46 188.7 168 54.8
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 3.7e-46 188.7 168 52.4
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 9.2e-45 184.1 170 54.1
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 2.0e-44 183.0 165 53.3
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.7e-44 182.6 168 53.6
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 4.6e-44 181.8 170 52.4
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 6.0e-44 181.4 168 53.6
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 7.8e-44 181.0 173 50.3
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 7.8e-44 181.0 165 53.9
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.7e-43 179.9 165 53.3
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 8.6e-43 177.6 174 51.7
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.1e-42 177.2 174 51.7
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 3.1e-40 169.1 176 47.2
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 6.8e-40 167.9 165 46.7
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 8.9e-40 167.5 168 51.2
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.5e-39 166.8 173 49.7
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.5e-39 166.8 174 50.6
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 4.4e-39 165.2 162 50.0
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 7.5e-39 164.5 168 50.0
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.3e-38 163.7 172 45.9
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 1.3e-38 163.7 169 51.5
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.7e-38 163.3 162 47.5
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 6.4e-38 161.4 168 47.6
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 6.4e-38 161.4 173 48.6
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 8.3e-38 161.0 168 49.4
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 8.3e-38 161.0 168 47.6
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.1e-37 160.6 168 48.2
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.1e-37 160.6 180 47.2
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 1.4e-37 160.2 178 45.5
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.4e-37 160.2 172 48.8
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.4e-37 160.2 178 47.8
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 4.1e-37 158.7 166 46.4
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 7.1e-37 157.9 165 46.7
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 1.2e-36 157.1 169 47.3
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.1e-36 156.4 172 45.9
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.1e-36 156.4 176 46.0
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 3.5e-36 155.6 181 44.2
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.6e-36 155.2 176 45.5
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 7.8e-36 154.5 171 48.5
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 7.8e-36 154.5 165 46.7
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.0e-35 154.1 171 45.0
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 1.3e-35 153.7 176 44.9
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 1.7e-35 153.3 173 49.1
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 3.9e-35 152.1 167 44.9
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 8.6e-35 151.0 167 43.7
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.9e-34 149.8 170 48.2
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.3e-34 149.1 176 44.3
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 3.3e-34 149.1 169 45.0
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 4.3e-34 148.7 172 44.8
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 7.3e-34 147.9 176 44.9
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 8.1e-33 144.4 169 43.2
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 1.8e-32 143.3 132 53.0
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 8.9e-32 141.0 175 42.9
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.0e-31 139.8 174 43.1
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.0e-31 139.8 177 44.1
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 4.4e-31 138.7 170 43.5
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.7e-30 136.7 173 42.2
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 6.4e-30 134.8 165 39.4
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 6.4e-30 134.8 169 40.8
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 8.4e-30 134.4 169 42.6
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.1e-29 134.0 175 42.3
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.4e-29 133.7 169 43.2
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 1.9e-29 133.3 169 42.6
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 1.9e-29 133.3 171 40.4
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 2.4e-29 132.9 169 42.6
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 7.1e-29 131.3 169 42.0
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 7.1e-29 131.3 177 42.4
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.2e-28 130.6 169 42.0
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.2e-28 130.6 169 42.0
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 1.6e-28 130.2 166 47.6
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.7e-28 129.4 173 41.0
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 7.8e-28 127.9 165 43.0
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.0e-27 127.5 178 40.4
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 1.3e-27 127.1 167 40.7
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 5.1e-27 125.2 167 39.5
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.1e-26 124.0 165 41.2
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 7.3e-26 121.3 167 40.7
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 3.6e-25 119.0 169 40.2
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 3.6e-25 119.0 170 42.4
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 6.9e-24 114.8 170 40.6
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 9.0e-24 114.4 174 42.5
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.2e-23 114.0 173 40.5
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 2.2e-22 109.8 184 35.9
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.1e-21 107.5 167 39.5
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 4.8e-17 92.0 167 34.7
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 9.9e-15 84.3 166 33.7
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.3e-14 84.0 87 50.6
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.7e-14 83.6 106 42.5
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.2e-13 79.3 67 59.7
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.1e-09 66.6 67 52.2
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 4.8e-09 65.5 105 32.4


User provided reference genes

Program Settings