Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G26.17 Capsicum annuum HOM05D006617 ORTHO05D008247 3.9e-165 584.7 293 100.0
PGSC0003DMG400004251 Solanum tuberosum HOM05D006617 ORTHO05D008247 8.7e-141 503.8 293 85.7
Solyc12g056350.2 Solanum lycopersicum HOM05D006617 ORTHO05D008247 1.4e-138 496.5 293 84.0
Sopen12g028920 Solanum pennellii HOM05D006617 ORTHO05D008247 3.1e-138 495.4 293 84.6
Peaxi162Scf01294g00327 Petunia axillaris HOM05D006617 ORTHO05D008247 1.7e-96 356.7 249 75.1
CiPaw.11G138400 Carya illinoinensis HOM05D006617 ORTHO05D008247 2.6e-92 342.8 244 68.9
Migut.A00797 Erythranthe guttata HOM05D006617 ORTHO05D008247 4.4e-92 342.0 254 66.1
SalBow6G1063 Salvia bowleyana HOM05D006617 ORTHO05D008247 9.8e-92 340.9 248 64.9
Nitab4.5_0010198g0030 Nicotiana tabacum HOM05D006617 ORTHO05D008247 4.9e-91 338.6 307 61.6
Lj8A235T58 Lonicera japonica HOM05D006617 ORTHO05D008247 9.2e-90 334.3 245 66.1
CSS0023405 Camellia sinensis var. sinensis HOM05D006617 ORTHO05D008247 1.6e-89 333.6 248 65.3
Actinidia14540 Actinidia chinensis HOM05D006617 ORTHO05D008247 2.0e-89 333.2 245 64.9
Dinv38979 Davidia involucrata HOM05D006617 ORTHO05D008247 2.0e-89 333.2 258 63.2
GSVIVG01019803001 Vitis vinifera HOM05D006617 ORTHO05D008247 2.0e-89 333.2 262 62.2
Nn6g33542 Nelumbo nucifera HOM05D006617 ORTHO05D008247 1.3e-88 330.5 294 58.5
VMungo0251G0775 Vigna mungo HOM05D006617 ORTHO05D008247 1.3e-88 330.5 270 60.0
Cc08_g14300 Coffea canephora HOM05D006617 ORTHO05D008247 2.3e-88 329.7 224 69.6
Phvul.002G287200 Phaseolus vulgaris HOM05D006617 ORTHO05D008247 2.9e-88 329.3 270 59.6
Atru.chr6.3216 Acer truncatum HOM05D006617 ORTHO05D008247 5.0e-88 328.6 239 64.9
RcHm_v2.0_Chr7g0198641 Rosa chinensis HOM05D006617 ORTHO05D008247 5.0e-88 328.6 245 65.3
Ciclev10016122m.g Citrus clementina HOM05D006617 ORTHO05D008247 1.5e-87 327.0 238 64.3
FAN04G2914 Fragaria x ananassa HOM05D006617 ORTHO05D008247 3.3e-87 325.9 245 65.7
TPR.G12841 Trifolium pratense HOM05D006617 ORTHO05D008247 3.3e-87 325.9 256 61.3
Potri.014G154900 Populus trichocarpa HOM05D006617 ORTHO05D008247 2.8e-86 322.8 284 56.0
MD06G1077000 Malus domestica HOM05D006617 ORTHO05D008247 3.6e-86 322.4 248 62.9
Thecc.02G366400 Theobroma cacao HOM05D006617 ORTHO05D008247 4.7e-86 322.0 240 61.7
Prupe.5G095100 Prunus persica HOM05D006617 ORTHO05D008247 6.1e-86 321.6 289 55.4
Glyma.08G012200 Glycine max HOM05D006617 ORTHO05D008247 8.0e-86 321.2 271 57.6
QL12p017915 Quercus lobata HOM05D006617 ORTHO05D008247 1.0e-85 320.9 243 63.0
Glyma.05G205300 Glycine max HOM05D006617 ORTHO05D008247 1.4e-85 320.5 272 58.8
Medtr8g096960 Medicago truncatula HOM05D006617 ORTHO05D008247 1.4e-85 320.5 248 61.7
Manes.12G073000 Manihot esculenta HOM05D006617 ORTHO05D008247 4.0e-85 318.9 239 63.2
Cpa.g.sc39.21 Carica papaya HOM05D006617 ORTHO05D008247 8.9e-85 317.8 222 66.7
DCAR_008412 Daucus carota HOM05D006617 ORTHO05D008247 8.9e-85 317.8 244 64.8
Psat7g035840 Pisum sativum HOM05D006617 ORTHO05D008247 2.0e-84 316.6 255 62.7
Ah.12g057360 Amaranthus hybridus HOM05D006617 ORTHO05D008247 3.4e-84 315.8 255 59.6
Lj4g0017727 Lotus japonicus HOM05D006617 ORTHO05D008247 3.4e-84 315.8 250 62.8
COL.COLO4_11251 Corchorus olitorius HOM05D006617 ORTHO05D008247 7.5e-84 314.7 254 58.7
Ca_17553_v3 Cicer arietinum L. HOM05D006617 ORTHO05D008247 1.3e-83 313.9 279 56.6
Lalb_Chr05g0224971 Lupinus albus HOM05D006617 ORTHO05D008247 3.7e-83 312.4 247 63.6
FAN13G2116 Fragaria x ananassa HOM05D006617 ORTHO05D008247 4.9e-83 312.0 238 65.1
ECA233G3703 Erigeron canadensis HOM05D006617 ORTHO05D008247 1.4e-82 310.5 241 61.4
TWI36G1290 Tripterygium wilfordii HOM05D006617 ORTHO05D008247 1.4e-82 310.5 242 62.4
Lsat_1_v5_gn_6_6941 Lactuca sativa HOM05D006617 ORTHO05D008247 3.2e-82 309.3 281 55.9
HanXRQChr12g0384501 Helianthus annuus HOM05D006617 ORTHO05D008247 4.1e-82 308.9 246 61.0
Hma1.2p1_0514F.1_g169800 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 5.4e-82 308.5 249 62.2
Sc22g0000340 Simmondsia chinensis HOM05D006617 ORTHO05D008247 5.4e-82 308.5 248 60.9
Duzib251G0852 Durio zibethinus HOM05D006617 ORTHO05D008247 2.0e-81 306.6 251 58.2
Eucgr.D01883 Eucalyptus grandis HOM05D006617 ORTHO05D008247 2.7e-81 306.2 249 59.8
Sed0011813 Sechium edule HOM05D006617 ORTHO05D008247 2.7e-81 306.2 242 61.6
arahy.Tifrunner.gnm1.ann1.164QK4 Arachis hypogaea HOM05D006617 ORTHO05D008247 7.8e-81 304.7 269 57.2
arahy.Tifrunner.gnm1.ann1.90PEWX Arachis hypogaea HOM05D006617 ORTHO05D008247 7.8e-81 304.7 269 57.2
PSO782G1088 Papaver somniferum HOM05D006617 ORTHO05D008247 7.8e-81 304.7 230 64.3
EL10Ac5g12764 Beta vulgaris HOM05D006617 ORTHO05D008247 1.7e-80 303.5 228 64.0
CsaV3_4G006040 Cucumis sativus L. HOM05D006617 ORTHO05D008247 1.7e-80 303.5 226 63.3
THA.LOC104800995 Tarenaya hassleriana HOM05D006617 ORTHO05D008247 1.7e-80 303.5 227 62.6
Thhalv10017053m.g Eutrema salsugineum HOM05D006617 ORTHO05D008247 5.0e-80 302.0 251 55.0
PSO478G3588 Papaver somniferum HOM05D006617 ORTHO05D008247 8.6e-80 301.2 230 64.3
MELO3C016345.2 Cucumis melo HOM05D006617 ORTHO05D008247 1.5e-79 300.4 226 63.3
Carub.0004s1384 Capsella rubella HOM05D006617 ORTHO05D008247 7.3e-79 298.1 251 55.8
AL4G27880 Arabidopsis lyrata HOM05D006617 ORTHO05D008247 1.6e-78 297.0 251 55.8
Gohir.A12G174300 Gossypium hirsutum HOM05D006617 ORTHO05D008247 1.8e-77 293.5 271 53.1
Gohir.D12G177000 Gossypium hirsutum HOM05D006617 ORTHO05D008247 4.0e-77 292.4 277 52.3
Gorai.008G189400 Gossypium raimondii HOM05D006617 ORTHO05D008247 4.0e-77 292.4 277 52.3
FAN18G0570 Fragaria x ananassa HOM05D006617 ORTHO05D008247 5.2e-77 292.0 235 63.0
BcaB01g03976 Brassica carinata HOM05D006617 ORTHO05D008247 6.8e-77 291.6 252 54.0
Sp4g14850 Schrenkiella parvula HOM05D006617 ORTHO05D008247 8.9e-77 291.2 251 53.4
A03p18190 Brassica napus HOM05D006617 ORTHO05D008247 5.8e-76 288.5 253 54.2
BraA03t11079Z Brassica rapa HOM05D006617 ORTHO05D008247 5.8e-76 288.5 253 54.2
FvH4_5g01880 Fragaria vesca HOM05D006617 ORTHO05D008247 4.9e-75 285.4 216 65.7
BcaC01g05904 Brassica carinata HOM05D006617 ORTHO05D008247 6.4e-75 285.0 253 53.8
FAN08G3651 Fragaria x ananassa HOM05D006617 ORTHO05D008247 1.9e-74 283.5 235 61.7
C03p21220 Brassica napus HOM05D006617 ORTHO05D008247 2.4e-74 283.1 253 53.4
BolC3t14504H Brassica oleracea HOM05D006617 ORTHO05D008247 2.4e-74 283.1 253 53.4
Sabra14G0117100 Salix brachista HOM05D006617 ORTHO05D008247 7.0e-74 281.6 238 58.8
Aa31LG5G4800 Aethionema arabicum HOM05D006617 ORTHO05D008247 3.5e-73 279.3 269 51.3
AUR62017243 Chenopodium quinoa HOM05D006617 ORTHO05D008247 3.5e-73 279.3 218 61.0
Nitab4.5_0000360g0080 Nicotiana tabacum HOM05D006617 ORTHO05D008247 7.8e-73 278.1 181 77.3
TAR375G0379 Trochodendron aralioides HOM05D006617 ORTHO05D008247 2.5e-71 273.1 188 70.2
Hund11496 Selenicereus undatus HOM05D006617 ORTHO05D008247 5.6e-71 271.9 239 56.1
Nitab4.5_0029474g0010 Nicotiana tabacum HOM05D006617 ORTHO05D008247 3.6e-70 269.2 196 70.4
PGR031G1807 Punica granatum HOM05D006617 ORTHO05D008247 2.3e-69 266.5 256 53.9
ATR0680G238 Amborella trichopoda HOM05D006617 ORTHO05D008247 5.2e-69 265.4 235 53.2
HPP92_004974 Vanilla planifolia HOM05D006617 ORTHO05D008247 2.0e-68 263.5 226 55.3
AUR62010601 Chenopodium quinoa HOM05D000030 ORTHO05D008247 3.4e-68 262.7 196 63.8
Haze_08904 Corylus avellana HOM05D006617 ORTHO05D008247 1.3e-64 250.8 217 57.1
MBI18_g01147_MAGBIO Magnolia biondii HOM05D006617 ORTHO05D008247 2.3e-64 250.0 190 64.2
Os03g0110900 Oryza sativa ssp. japonica HOM05D006617 ORTHO05D008247 2.3e-64 250.0 244 48.8
Haze_08908 Corylus avellana HOM05D006617 ORTHO05D008247 6.6e-64 248.4 217 56.7
ClCG07G007980 Citrullus lanatus HOM05D006617 ORTHO05D008247 1.2e-62 244.2 186 62.4
Zm00001eb404120 Zea mays HOM05D006617 ORTHO05D008247 2.1e-62 243.4 226 49.6
SGA_v2.0_scaffold146G36248 Striga asiatica HOM05D006617 ORTHO05D008247 2.9e-59 233.0 182 63.7
Oeu025101.1 Olea europaea HOM05D006617 ORTHO05D008247 9.2e-58 228.0 165 66.7
AT2G32500 Arabidopsis thaliana HOM05D006617 ORTHO05D008247 3.6e-54 216.1 188 55.9
Actinidia02025 Actinidia chinensis HOM05D006617 ORTHO05D008247 4.0e-53 212.6 182 59.9
SEGI_22684 Sequoiadendron giganteum HOM05D006617 ORTHO05D008247 6.9e-53 211.8 221 46.2
SMO329G0076 Selaginella moellendorffii HOM05D006617 ORTHO05D008247 7.6e-44 181.8 225 41.3
Aqoxy7G00382 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 1.1e-42 177.9 134 61.9
AagrBONN_evm.TU.Sc2ySwM_228.4793 Anthoceros agrestis HOM05D006617 ORTHO05D008247 1.8e-40 170.6 260 36.2
CARHR126330 Cardamine hirsuta HOM05D006617 ORTHO05D008247 2.3e-40 170.2 134 56.0
Hma1.2p1_3255F.1_g334560 Hydrangea macrophylla HOM05D006617 ORTHO05D008247 3.3e-39 166.4 180 50.6
Pp3c20_8200 Physcomitrium patens HOM05D006617 ORTHO05D008247 3.1e-37 159.8 220 40.5
MSTRG.12003 Avicennia marina HOM05D006617 ORTHO05D008247 3.2e-34 149.8 114 60.5
Aqoxy7G00383 Aquilegia oxysepala HOM05D006617 ORTHO05D008247 6.7e-32 142.1 92 70.7
AUR62042944 Chenopodium quinoa HOM05D006617 ORTHO05D008247 6.9e-29 132.1 130 50.0
Mapoly0086s0010 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.0e-27 128.3 242 31.8
Mapoly0086s0005 Marchantia polymorpha HOM05D006617 ORTHO05D008247 1.1e-23 114.8 217 30.4
Pp3c7_1410 Physcomitrium patens HOM05D006617 ORTHO05D008247 6.9e-21 105.5 222 30.6
Glyma.05G087800 Glycine max HOM05D006617 ORTHO05D008247 1.0e-19 101.7 79 60.8
Lsat_1_v5_gn_8_1081 Lactuca sativa HOM05D006617 ORTHO05D008247 2.5e-15 87.0 103 46.6
PRCOL_00003136 Prasinoderma coloniale HOM05D006617 ORTHO05D008247 5.7e-15 85.9 202 30.7
Pp3c8_19270 Physcomitrium patens HOM05D006617 ORTHO05D008247 1.3e-14 84.7 225 27.6
CBR_g57728 Chara braunii HOM05D006617 ORTHO05D008247 2.4e-13 80.5 115 38.3
CAN.G1231.36 Capsicum annuum HOM05D006617 ORTHO05D008247 1.3e-11 74.7 50 78.0
CDE06G1437 Ceratophyllum demersum HOM05D006617 ORTHO05D008247 2.7e-09 67.0 98 42.9
MD14G1098400 Malus domestica HOM05D006617 ORTHO05D008247 6.1e-09 65.9 68 51.5
SMO307G0050 Selaginella moellendorffii HOM05D037974 ORTHO05D008247 3.9e-08 63.2 219 25.1
Pp3c15_7020 Physcomitrium patens HOM05D003252 ORTHO05D003640 3.3e-07 60.1 217 25.3


User provided reference genes

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