Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G256.23 Capsicum annuum HOM05D005198 ORTHO05D006839 2.6e-100 368.6 175 100.0
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 4.5e-76 288.1 152 89.5
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.2e-70 269.2 152 83.6
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 9.1e-69 263.8 152 80.9
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 1.0e-67 260.4 152 81.6
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 4.2e-66 255.0 152 78.9
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 7.2e-58 227.6 154 66.2
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 7.2e-58 227.6 154 64.3
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 1.6e-57 226.5 154 65.6
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 6.1e-57 224.6 152 63.8
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 1.4e-56 223.4 154 64.3
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 4.0e-56 221.9 152 64.5
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 1.5e-55 219.9 152 63.8
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 2.0e-55 219.5 152 63.2
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 4.4e-55 218.4 152 66.4
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 4.4e-55 218.4 152 64.5
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 5.7e-55 218.0 152 64.5
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 9.8e-55 217.2 152 63.8
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 6.3e-54 214.5 152 63.2
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 6.3e-54 214.5 152 62.5
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 6.3e-54 214.5 153 64.1
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 2.4e-53 212.6 152 63.2
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 2.4e-53 212.6 152 57.9
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 3.1e-53 212.2 146 65.1
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 4.1e-53 211.8 152 60.5
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 4.1e-53 211.8 147 63.9
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 5.4e-53 211.5 152 61.8
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.2e-52 210.3 152 61.2
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.2e-52 210.3 152 61.2
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 2.7e-52 209.1 152 63.2
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 2.7e-52 209.1 152 65.8
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 3.5e-52 208.8 152 61.2
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 3.5e-52 208.8 155 60.6
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 7.7e-52 207.6 152 59.9
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.0e-51 207.2 152 62.5
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 2.2e-51 206.1 145 62.1
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 2.9e-51 205.7 152 63.2
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 3.8e-51 205.3 152 63.2
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.5e-50 203.4 152 59.9
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 1.5e-50 203.4 145 62.1
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 5.5e-50 201.4 152 58.6
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 9.4e-50 200.7 152 60.5
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.2e-49 200.3 152 59.2
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 1.6e-49 199.9 152 57.9
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 2.1e-49 199.5 141 61.0
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 2.7e-49 199.1 152 58.6
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 8.0e-49 197.6 145 60.0
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 8.0e-49 197.6 138 65.9
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 1.0e-48 197.2 167 54.5
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 1.8e-48 196.4 145 60.7
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 2.3e-48 196.1 147 60.5
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 2.3e-48 196.1 152 57.9
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 2.3e-48 196.1 152 58.6
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 3.0e-48 195.7 153 58.8
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 5.2e-48 194.9 152 58.6
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 8.8e-48 194.1 153 58.2
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 1.2e-47 193.7 154 59.1
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.2e-47 193.7 152 57.9
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 1.2e-47 193.7 152 58.6
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 2.0e-47 193.0 152 57.2
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 2.0e-47 193.0 152 56.6
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 2.6e-47 192.6 152 57.2
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 3.4e-47 192.2 152 59.2
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 4.4e-47 191.8 146 58.9
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 5.7e-47 191.4 152 58.6
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.3e-46 190.3 152 55.3
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 1.7e-46 189.9 152 57.2
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 1.7e-46 189.9 153 58.2
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 8.3e-46 187.6 155 54.2
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 1.8e-45 186.4 152 57.2
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 5.4e-45 184.9 152 54.6
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 5.4e-45 184.9 140 59.3
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 5.4e-45 184.9 152 57.9
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 7.0e-45 184.5 143 57.3
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.0e-44 183.0 144 56.2
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 2.7e-44 182.6 144 55.6
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 4.5e-44 181.8 144 55.6
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 2.9e-43 179.1 146 56.2
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.5e-42 176.8 140 56.4
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 4.2e-42 175.3 146 53.4
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 4.2e-42 175.3 146 54.8
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 7.2e-42 174.5 146 54.8
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 7.2e-42 174.5 146 53.4
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.2e-41 173.7 169 51.5
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 2.8e-41 172.6 146 53.4
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 2.8e-41 172.6 146 53.4
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 3.6e-41 172.2 147 55.8
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 4.7e-41 171.8 147 55.8
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 6.1e-41 171.4 146 52.7
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 8.0e-41 171.0 150 53.3
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 1.0e-40 170.6 97 81.4
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 1.8e-40 169.9 149 54.4
Ca_18641_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 5.2e-40 168.3 126 59.5
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 6.8e-40 167.9 147 55.8
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 1.3e-38 163.7 134 56.0
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 4.9e-38 161.8 117 59.8
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 1.2e-36 157.1 152 44.7
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 2.0e-36 156.4 145 54.5
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 5.0e-35 151.8 106 63.2
SHI30330 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-34 150.2 140 50.0
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 8.9e-32 141.0 146 46.6
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 3.4e-31 139.0 97 63.9
SEGI_27162 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 2.2e-30 136.3 130 50.8
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 9.2e-29 131.0 152 45.4
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.1e-24 117.5 144 43.8
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 4.0e-24 115.5 143 41.3
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 6.8e-24 114.8 145 42.1
BolC3t18675H Brassica oleracea HOM05D005198 ORTHO05D006839 9.8e-23 110.9 101 52.5
Glyma.03G132500 Glycine max HOM05D005198 ORTHO05D006839 2.6e-15 86.3 72 54.2
Psat1g217120 Pisum sativum HOM05D005198 ORTHO05D006839 9.2e-13 77.8 58 60.3
Dinv33202 Davidia involucrata HOM05D005198 ORTHO05D006839 3.0e-11 72.8 54 61.1
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 2.6e-07 59.7 112 33.0


User provided reference genes

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