Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G251.5 Capsicum annuum HOM05D001901 ORTHO05D001850 7.3e-26 120.6 103 100.0
Peaxi162Scf00173g00611 Petunia axillaris HOM05D001901 ORTHO05D001850 1.3e-14 83.2 103 51.5
Solyc11g007110.2 Solanum lycopersicum HOM05D001901 ORTHO05D001850 4.9e-14 81.3 97 53.6
Sopen11g003030 Solanum pennellii HOM05D001901 ORTHO05D001850 4.9e-14 81.3 97 70.1
PGSC0003DMG400019487 Solanum tuberosum HOM05D001901 ORTHO05D001850 4.9e-14 81.3 97 68.0
Cc02_g09820 Coffea canephora HOM05D001901 ORTHO05D001850 2.7e-12 75.5 101 53.5
Actinidia06700 Actinidia chinensis HOM05D001901 ORTHO05D001850 2.3e-11 72.4 100 63.0
CSS0034138 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 3.9e-11 71.6 100 58.0
CSS0000065 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 6.6e-11 70.9 100 68.0
CSS0016854 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 1.9e-10 69.3 102 60.8
Oeu025593.4 Olea europaea HOM05D001901 ORTHO05D001850 1.9e-10 69.3 103 43.7
Dinv02031 Davidia involucrata HOM05D001901 ORTHO05D001850 4.3e-10 68.2 100 74.0
Dinv11851 Davidia involucrata HOM05D001901 ORTHO05D001850 4.3e-10 68.2 100 74.0
Duzib128G0410 Durio zibethinus HOM05D001901 ORTHO05D001850 4.3e-10 68.2 100 46.0
Lj2C31G15 Lonicera japonica HOM05D001901 ORTHO05D001850 5.6e-10 67.8 100 41.0
CAN.G730.31 Capsicum annuum HOM05D001901 ORTHO05D001850 7.3e-10 67.4 100 51.0
Actinidia18591 Actinidia chinensis HOM05D001901 ORTHO05D001850 1.3e-09 66.6 100 61.0
DCAR_006342 Daucus carota HOM05D001901 ORTHO05D001850 1.3e-09 66.6 100 44.0
Dinv09597 Davidia involucrata HOM05D001901 ORTHO05D001850 1.3e-09 66.6 102 52.0
CANSAT56G1512 Cannabis sativa HOM05D001901 ORTHO05D001850 3.6e-09 65.1 101 42.6
Ciclev10031477m.g Citrus clementina HOM05D001901 ORTHO05D001850 6.2e-09 64.3 100 41.0
CSS0009075 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 8.1e-09 63.9 104 57.7
Nitab4.5_0003774g0060 Nicotiana tabacum HOM05D001901 ORTHO05D001850 8.1e-09 63.9 102 45.1
Thecc.10G107100 Theobroma cacao HOM05D001901 ORTHO05D001850 8.1e-09 63.9 100 42.0
Gohir.A10G198000 Gossypium hirsutum HOM05D001901 ORTHO05D001850 1.1e-08 63.5 100 41.0
Gohir.D10G205100 Gossypium hirsutum HOM05D001901 ORTHO05D001850 1.1e-08 63.5 100 41.0
Gorai.011G230000 Gossypium raimondii HOM05D001901 ORTHO05D001850 1.1e-08 63.5 100 41.0
Rhsim03G0099800 Rhododendron simsii HOM05D001901 ORTHO05D001850 1.1e-08 63.5 100 63.0
Duzib106G0363 Durio zibethinus HOM05D001901 ORTHO05D001850 1.4e-08 63.2 100 41.0
MD02G1255700 Malus domestica HOM05D001901 ORTHO05D001850 1.8e-08 62.8 100 41.0
FvH4_7g05730 Fragaria vesca HOM05D001901 ORTHO05D001850 2.4e-08 62.4 100 41.0
FAN03G1021 Fragaria x ananassa HOM05D001901 ORTHO05D001850 2.4e-08 62.4 100 41.0
Rhsim09G0142800 Rhododendron simsii HOM05D001901 ORTHO05D001850 2.4e-08 62.4 100 42.0
RcHm_v2.0_Chr1g0332761 Rosa chinensis HOM05D001901 ORTHO05D001850 2.4e-08 62.4 100 42.0
TWI15G0670 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 2.4e-08 62.4 103 41.7
MSTRG.27533 Avicennia marina HOM05D001901 ORTHO05D001850 3.1e-08 62.0 106 39.6
Cpa.g.sc183.7 Carica papaya HOM05D001901 ORTHO05D001850 5.3e-08 61.2 100 60.0
Haze_02514 Corylus avellana HOM05D001901 ORTHO05D001850 5.3e-08 61.2 105 55.2
TWI63G1270 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 5.3e-08 61.2 102 40.2
Atru.chr12.1005 Acer truncatum HOM05D001901 ORTHO05D001850 6.9e-08 60.8 100 43.0
FAN01G1784 Fragaria x ananassa HOM05D001901 ORTHO05D001850 6.9e-08 60.8 100 41.0
FAN06G0939 Fragaria x ananassa HOM05D001901 ORTHO05D001850 6.9e-08 60.8 100 41.0
FAN10G0070 Fragaria x ananassa HOM05D001901 ORTHO05D001850 6.9e-08 60.8 100 41.0
Prupe.2G079700 Prunus persica HOM05D001901 ORTHO05D001850 6.9e-08 60.8 100 40.0
Lsat_1_v5_gn_2_104661 Lactuca sativa HOM05D001901 ORTHO05D001850 9.0e-08 60.5 104 59.6
Oeu026576.1 Olea europaea HOM05D001901 ORTHO05D001850 1.2e-07 60.1 103 37.9
Ah.06g187720 Amaranthus hybridus HOM05D001901 ORTHO05D001850 1.5e-07 59.7 100 39.0
CAN.G31.1 Capsicum annuum HOM05D001901 ORTHO05D001850 1.5e-07 59.7 62 50.0
MELO3C012355.2 Cucumis melo HOM05D001901 ORTHO05D001850 2.0e-07 59.3 101 40.6
EL10Ac4g08640 Beta vulgaris HOM05D001901 ORTHO05D001850 2.6e-07 58.9 103 38.8
Cfa011264 Carpinus fangiana HOM05D001901 ORTHO05D001850 2.6e-07 58.9 100 41.0
Manes.07G087800 Manihot esculenta HOM05D001901 ORTHO05D001850 2.6e-07 58.9 100 38.0
THA.LOC104801230 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 2.6e-07 58.9 100 44.0
THA.LOC104825357 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 2.6e-07 58.9 100 39.0
CiPaw.13G038500 Carya illinoinensis HOM05D001901 ORTHO05D001850 3.4e-07 58.5 100 42.0
ClCG05G021740 Citrullus lanatus HOM05D001901 ORTHO05D001850 3.4e-07 58.5 103 39.8
MSTRG.9088 Avicennia marina HOM05D001901 ORTHO05D001850 4.5e-07 58.2 105 37.1
Hund22299 Selenicereus undatus HOM05D001901 ORTHO05D001850 4.5e-07 58.2 100 38.0
Manes.10G058300 Manihot esculenta HOM05D001901 ORTHO05D001850 5.8e-07 57.8 100 38.0
ECA238G2260 Erigeron canadensis HOM05D001901 ORTHO05D001850 7.6e-07 57.4 101 54.5
Sabra10G0185900 Salix brachista HOM05D001901 ORTHO05D001850 7.6e-07 57.4 101 40.6
Potri.010G237500 Populus trichocarpa HOM05D001901 ORTHO05D001850 9.9e-07 57.0 101 40.6
HanXRQChr11g0321281 Helianthus annuus HOM05D001901 ORTHO05D001850 1.3e-06 56.6 100 39.0
Medtr1g092900 Medicago truncatula HOM05D001901 ORTHO05D001850 1.3e-06 56.6 100 38.0
PSO339G5608 Papaver somniferum HOM05D001901 ORTHO05D001850 1.3e-06 56.6 100 50.0
TWI38G1487 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 1.3e-06 56.6 101 37.6
TAR636G1819 Trochodendron aralioides HOM05D001901 ORTHO05D001850 1.3e-06 56.6 104 38.5
Migut.F00906 Erythranthe guttata HOM05D001901 ORTHO05D001850 1.7e-06 56.2 103 36.9
Glyma.10G203800 Glycine max HOM05D001901 ORTHO05D001850 1.7e-06 56.2 103 41.7
Lj3C928T15 Lonicera japonica HOM05D001901 ORTHO05D001850 1.7e-06 56.2 88 40.9
SalBow6G1394 Salvia bowleyana HOM05D001901 ORTHO05D001850 1.7e-06 56.2 88 40.9
SGA_v2.0_scaffold62G21344 Striga asiatica HOM05D001901 ORTHO05D001850 2.2e-06 55.8 88 39.8
SGA_v2.0_scaffold13G06486 Striga asiatica HOM05D001901 ORTHO05D004049 2.9e-06 55.5 88 39.8
TAR369G0706 Trochodendron aralioides HOM05D001901 ORTHO05D001850 2.9e-06 55.5 102 50.0
HanXRQChr05g0146921 Helianthus annuus HOM05D001901 ORTHO05D001850 3.8e-06 55.1 96 37.5
TAR633G0842 Trochodendron aralioides HOM05D001901 ORTHO05D001850 4.9e-06 54.7 103 36.9
PSO384G4327 Papaver somniferum HOM05D001901 ORTHO05D001850 6.4e-06 54.3 100 49.0
ATR0820G142 Amborella trichopoda HOM05D001901 ORTHO05D001850 8.4e-06 53.9 94 38.3
Phvul.007G103200 Phaseolus vulgaris HOM05D001901 ORTHO05D001850 8.4e-06 53.9 103 48.5


User provided reference genes

Program Settings