Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 5.1e-190 667.5 330 100.0
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 4.6e-114 415.2 351 65.0
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 4.3e-112 408.7 351 64.1
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 5.6e-112 408.3 351 63.8
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.6e-109 397.9 351 62.7
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.4e-107 392.9 351 60.1
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 8.7e-97 357.8 351 57.8
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 5.7e-88 328.6 352 52.6
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 2.2e-87 326.6 349 51.6
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.5e-85 320.5 351 50.4
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.5e-85 320.5 350 51.1
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 5.0e-84 315.5 366 49.5
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.2e-82 310.8 349 49.9
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 2.1e-82 310.1 350 49.4
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 7.9e-82 308.1 336 50.0
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 2.3e-81 306.6 350 49.7
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 5.1e-81 305.4 351 49.0
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.1e-80 304.3 348 48.0
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 1.1e-80 304.3 349 48.1
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.5e-80 303.9 350 48.0
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 9.7e-80 301.2 352 48.3
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 2.2e-79 300.1 350 47.4
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 8.2e-79 298.1 352 47.2
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 3.1e-78 296.2 350 48.3
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 3.1e-78 296.2 351 48.4
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 5.3e-78 295.4 351 48.1
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 6.9e-78 295.0 352 47.7
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 9.1e-78 294.7 366 46.7
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 9.1e-78 294.7 350 48.9
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.2e-77 294.3 352 48.0
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 1.2e-77 294.3 352 47.2
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.5e-77 293.9 352 47.7
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.6e-77 293.1 472 40.7
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 3.4e-77 292.7 351 47.3
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.7e-76 290.4 349 47.3
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 6.5e-76 288.5 350 46.3
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 6.5e-76 288.5 352 46.9
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 8.5e-76 288.1 343 47.5
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 4.2e-75 285.8 347 45.2
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 4.2e-75 285.8 373 44.0
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 7.2e-75 285.0 352 47.4
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.6e-74 283.9 351 47.3
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 1.6e-74 283.9 352 44.9
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 2.1e-74 283.5 351 47.0
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 6.1e-74 282.0 351 46.4
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 6.1e-74 282.0 347 45.8
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.8e-73 280.4 351 45.9
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.8e-73 280.4 349 45.3
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 3.9e-73 279.3 346 46.0
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 3.9e-73 279.3 351 45.9
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 3.9e-73 279.3 351 45.9
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.9e-73 279.3 350 45.1
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 1.5e-72 277.3 345 47.8
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.5e-72 277.3 350 44.9
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.6e-72 276.6 348 45.4
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 9.7e-72 274.6 354 46.3
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.7e-71 273.9 350 44.9
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.2e-71 273.5 351 45.6
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 3.7e-71 272.7 348 46.3
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 3.7e-71 272.7 356 44.1
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 6.3e-71 271.9 354 45.8
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 1.4e-70 270.8 196 71.4
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 1.8e-70 270.4 349 44.1
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.8e-70 270.4 350 44.0
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.8e-70 270.4 352 43.5
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 3.1e-70 269.6 345 44.3
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.2e-69 267.7 249 54.6
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 1.5e-69 267.3 350 44.3
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.5e-69 267.3 345 46.7
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 5.9e-69 265.4 350 44.3
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 7.7e-69 265.0 354 44.1
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 1.0e-68 264.6 345 43.2
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 1.3e-68 264.2 350 43.1
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 6.5e-68 261.9 258 51.9
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 8.5e-68 261.5 350 44.3
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 1.5e-67 260.8 345 44.9
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 2.5e-67 260.0 351 43.9
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 1.2e-66 257.7 350 44.3
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.2e-66 257.7 367 43.3
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 1.6e-66 257.3 350 43.1
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 2.7e-66 256.5 351 43.9
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 3.6e-66 256.1 352 44.0
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.0e-65 254.6 350 42.0
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 1.0e-65 254.6 353 43.9
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.8e-65 253.8 353 43.9
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 1.8e-65 253.8 353 43.9
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 1.8e-65 253.8 346 41.0
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 8.8e-65 251.5 353 43.9
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 8.8e-65 251.5 353 43.9
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 3.3e-64 249.6 283 47.7
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 4.4e-64 249.2 330 45.2
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 9.7e-64 248.1 346 43.9
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 9.7e-64 248.1 346 43.9
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 9.7e-64 248.1 349 42.7
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 1.3e-63 247.7 347 42.1
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 4.8e-63 245.7 251 52.2
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 1.8e-62 243.8 259 51.0
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 3.1e-62 243.0 324 44.4
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 4.1e-62 242.7 250 52.8
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 2.7e-58 229.9 126 86.5
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.1e-58 228.8 254 48.8
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 1.1e-51 208.0 349 35.8
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 8.0e-50 201.8 191 57.1
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 1.3e-47 194.5 207 49.8
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 3.7e-47 193.0 203 52.2
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 3.1e-46 189.9 348 36.8
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.7e-45 185.3 196 51.5
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 3.3e-43 179.9 198 49.0
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.2e-42 177.9 361 34.1
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 2.1e-42 177.2 252 40.1
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 2.7e-37 160.2 264 40.2
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.6e-34 151.0 199 47.2
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.6e-34 151.0 247 36.8
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 3.3e-27 126.7 155 48.4
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 2.1e-26 124.0 87 65.5
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.7e-23 114.4 70 78.6
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 4.9e-23 112.8 73 71.2
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 8.6e-20 102.1 60 78.3
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 7.6e-16 89.0 249 30.5
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 4.6e-13 79.7 145 36.6


User provided reference genes

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