Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2478.4 Capsicum annuum HOM05D000141 ORTHO05D011930 7.6e-56 220.3 115 100.0
CAN.G4150.1 Capsicum annuum HOM05D000141 ORTHO05D011930 4.4e-48 194.5 109 93.6
CAN.G1237.15 Capsicum annuum HOM05D000141 ORTHO05D000780 7.1e-46 187.2 108 91.7
CAN.G182.1 Capsicum annuum HOM05D000141 ORTHO05D000780 7.1e-46 187.2 108 91.7
CAN.G182.2 Capsicum annuum HOM05D000141 ORTHO05D000780 7.1e-46 187.2 108 91.7
CAN.G2301.2 Capsicum annuum HOM05D000141 ORTHO05D011930 2.7e-45 185.3 108 90.7
CAN.G182.3 Capsicum annuum HOM05D000141 ORTHO05D011930 1.7e-44 182.6 108 89.8
CAN.G1784.5 Capsicum annuum HOM05D000141 ORTHO05D011930 5.1e-44 181.0 109 89.9
CAN.G2478.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.5e-43 179.5 108 88.9
CAN.G676.23 Capsicum annuum HOM05D000141 ORTHO05D000780 4.2e-38 161.4 101 86.1
Nitab4.5_0007721g0030 Nicotiana tabacum HOM05D000141 ORTHO05D000780 7.4e-35 150.6 108 78.7
CAN.G12411.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.8e-33 146.0 85 91.8
CAN.G7886.1 Capsicum annuum HOM05D000141 ORTHO05D011930 2.4e-33 145.6 86 90.7
Sopen04g008170 Solanum pennellii HOM05D000141 ORTHO05D000780 2.0e-32 142.5 108 74.1
Solyc04g016080.2 Solanum lycopersicum HOM05D000141 ORTHO05D000780 2.6e-32 142.1 108 74.1
PGSC0003DMG400027257 Solanum tuberosum HOM05D000141 ORTHO05D000780 4.5e-32 141.4 108 74.1
CAN.G1784.8 Capsicum annuum HOM05D000141 ORTHO05D011930 7.6e-32 140.6 86 89.5
Peaxi162Scf00130g00518 Petunia axillaris HOM05D000141 ORTHO05D000780 8.4e-31 137.1 108 73.1
CAN.G2052.3 Capsicum annuum HOM05D000141 ORTHO05D011930 3.5e-29 131.7 85 83.5
CAN.G7460.1 Capsicum annuum HOM05D000141 ORTHO05D011930 6.0e-29 131.0 79 87.3
CAN.G9568.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.8e-28 129.4 85 84.7
CAN.G2301.1 Capsicum annuum HOM05D000141 ORTHO05D011930 3.3e-27 125.2 85 82.4
CAN.G2032.1 Capsicum annuum HOM05D000141 ORTHO05D000780 7.4e-27 124.0 75 88.0
CAN.G4746.2 Capsicum annuum HOM05D000141 ORTHO05D011930 6.9e-25 117.5 79 81.0
Nitab4.5_0000636g0110 Nicotiana tabacum HOM05D000141 ORTHO05D011930 9.0e-25 117.1 85 80.0
CAN.G1784.4 Capsicum annuum HOM05D000141 ORTHO05D000780 1.3e-20 103.2 65 86.2
Cc06_g17730 Coffea canephora HOM05D000141 ORTHO05D000780 1.4e-17 93.2 112 50.9
QL07p001610 Quercus lobata HOM05D000141 ORTHO05D000780 1.4e-17 93.2 108 53.7
QL05p062269 Quercus lobata HOM05D000141 ORTHO05D000780 2.4e-17 92.4 108 53.7
Sabra06G0033900 Salix brachista HOM05D000141 ORTHO05D000780 1.2e-16 90.1 107 52.3
QL07p001657 Quercus lobata HOM05D000141 ORTHO05D011930 2.6e-16 89.0 108 51.9
Oeu062943.1 Olea europaea HOM05D000141 ORTHO05D000780 3.4e-16 88.6 106 50.9
Potri.006G048600 Populus trichocarpa HOM05D000141 ORTHO05D000780 7.7e-16 87.4 107 50.5
SalBow6G3691 Salvia bowleyana HOM05D000141 ORTHO05D000780 1.3e-15 86.7 103 52.4
CAN.G2305.1 Capsicum annuum HOM05D000141 ORTHO05D011930 1.7e-15 86.3 57 77.2
CiPaw.09G039400 Carya illinoinensis HOM05D000141 ORTHO05D000780 2.9e-15 85.5 107 50.5
Haze_19824 Corylus avellana HOM05D000141 ORTHO05D000780 6.5e-15 84.3 111 49.5
Haze_19829 Corylus avellana HOM05D000141 ORTHO05D000780 6.5e-15 84.3 111 49.5
TWI74G1537 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 1.4e-14 83.2 108 50.9
Hma1.2p1_0788F.1_g218060 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 1.9e-14 82.8 106 46.2
TWI53G1155 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 2.5e-14 82.4 107 48.6
SalBow6G3399 Salvia bowleyana HOM05D000141 ORTHO05D000780 5.5e-14 81.3 99 51.5
FAN09G2894 Fragaria x ananassa HOM05D000141 ORTHO05D000780 7.2e-14 80.9 109 47.7
Eucgr.A02334 Eucalyptus grandis HOM05D000141 ORTHO05D000780 1.2e-13 80.1 110 47.3
MD12G1076000 Malus domestica HOM05D000141 ORTHO05D000780 2.7e-13 79.0 100 50.0
Oeu033013.1 Olea europaea HOM05D000141 ORTHO05D000780 4.6e-13 78.2 107 44.9
RcHm_v2.0_Chr3g0483041 Rosa chinensis HOM05D000141 ORTHO05D000780 5.1e-12 74.7 93 49.5
MD14G1074400 Malus domestica HOM05D000141 ORTHO05D000780 6.7e-12 74.3 93 49.5
GSVIVG01033252001 Vitis vinifera HOM05D000141 ORTHO05D000780 1.1e-11 73.6 107 45.8
FvH4_6g24140 Fragaria vesca HOM05D000141 ORTHO05D000780 2.0e-11 72.8 95 49.5
Rhsim04G0102700 Rhododendron simsii HOM05D000141 ORTHO05D000780 2.5e-11 72.4 105 45.7
Manes.08G053050 Manihot esculenta HOM05D000141 ORTHO05D000780 3.3e-11 72.0 105 43.8
FAN14G3678 Fragaria x ananassa HOM05D000141 ORTHO05D000780 7.4e-11 70.9 95 49.5
Prupe.7G055800 Prunus persica HOM05D000141 ORTHO05D000780 7.4e-11 70.9 93 49.5
TAR369G0815 Trochodendron aralioides HOM05D000141 ORTHO05D011930 1.7e-10 69.7 88 47.7
Dinv39627 Davidia involucrata HOM05D000141 ORTHO05D011930 2.2e-10 69.3 69 53.6
Thecc.05G150300 Theobroma cacao HOM05D000141 ORTHO05D000780 2.2e-10 69.3 107 43.9
Ciclev10004492m.g Citrus clementina HOM05D000141 ORTHO05D000780 3.7e-10 68.6 109 44.0
TPR.G18240 Trifolium pratense HOM05D000141 ORTHO05D000780 3.7e-10 68.6 110 41.8
Hund24692 Selenicereus undatus HOM05D000141 ORTHO05D000780 4.8e-10 68.2 108 46.3
PGR004G2467 Punica granatum HOM05D000141 ORTHO05D000780 6.3e-10 67.8 110 42.7
Lj1g0025747 Lotus japonicus HOM05D000141 ORTHO05D000780 8.2e-10 67.4 108 40.7
CsaV3_4G022100 Cucumis sativus L. HOM05D000141 ORTHO05D000780 2.4e-09 65.9 117 41.9
arahy.Tifrunner.gnm1.ann1.SFU112 Arachis hypogaea HOM05D000141 ORTHO05D000780 5.3e-09 64.7 107 42.1
Psat3g073920 Pisum sativum HOM05D000141 ORTHO05D000780 5.3e-09 64.7 102 41.2
DCAR_013606 Daucus carota HOM05D000141 ORTHO05D000780 6.9e-09 64.3 105 40.0
MELO3C020742.2 Cucumis melo HOM05D000141 ORTHO05D000780 9.1e-09 63.9 116 42.2
arahy.Tifrunner.gnm1.ann1.JU456M Arachis hypogaea HOM05D000141 ORTHO05D000780 1.2e-08 63.5 107 41.1
Medtr7g091290 Medicago truncatula HOM05D000141 ORTHO05D000780 1.5e-08 63.2 112 42.0
Duzib106G2056 Durio zibethinus HOM05D000141 ORTHO05D000780 2.0e-08 62.8 106 40.6
Aqoxy2G00217 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 3.4e-08 62.0 103 46.6
Aa31LG3G2890 Aethionema arabicum HOM05D000141 ORTHO05D000780 4.5e-08 61.6 105 44.8
CAN.G778.7 Capsicum annuum HOM05D000141 ORTHO05D000780 4.5e-08 61.6 76 52.6
Nn2g15186 Nelumbo nucifera HOM05D000141 ORTHO05D000780 5.9e-08 61.2 109 41.3
SGA_v2.0_scaffold105G30398 Striga asiatica HOM05D000141 ORTHO05D000780 7.7e-08 60.8 106 40.6
THA.LOC104804702 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 7.7e-08 60.8 107 42.1
AUR62024474 Chenopodium quinoa HOM05D000141 ORTHO05D000780 1.3e-07 60.1 106 40.6
Atru.chr1.1137 Acer truncatum HOM05D000141 ORTHO05D000780 1.7e-07 59.7 77 48.1
AL3G21640 Arabidopsis lyrata HOM05D000141 ORTHO05D000780 1.7e-07 59.7 106 40.6
THA.LOC104816416 Tarenaya hassleriana HOM05D000141 ORTHO05D000780 1.7e-07 59.7 106 40.6
Glyma.03G134900 Glycine max HOM05D000141 ORTHO05D000780 2.2e-07 59.3 104 41.3
AT3G10310 Arabidopsis thaliana HOM05D000141 ORTHO05D000780 2.9e-07 58.9 106 39.6
AUR62026063 Chenopodium quinoa HOM05D000141 ORTHO05D000780 2.9e-07 58.9 107 39.3
COL.COLO4_20030 Corchorus olitorius HOM05D000141 ORTHO05D000780 2.9e-07 58.9 107 43.0
Lalb_Chr20g0110611 Lupinus albus HOM05D000141 ORTHO05D000780 3.8e-07 58.5 108 38.0
Thhalv10019993m.g Eutrema salsugineum HOM05D000141 ORTHO05D000780 8.5e-07 57.4 106 39.6
Lj2C386T5 Lonicera japonica HOM05D000141 ORTHO05D000780 8.5e-07 57.4 100 40.0
Sp3g08570 Schrenkiella parvula HOM05D000141 ORTHO05D000780 8.5e-07 57.4 106 39.6
Gohir.A01G192600 Gossypium hirsutum HOM05D000141 ORTHO05D000780 1.1e-06 57.0 108 38.9
Carub.0003s0949 Capsella rubella HOM05D000141 ORTHO05D000780 1.4e-06 56.6 109 39.4
FAN05G1533 Fragaria x ananassa HOM05D000141 ORTHO05D000780 1.4e-06 56.6 93 41.9
CSS0002874 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 2.5e-06 55.8 113 39.8
C05p57860 Brassica napus HOM05D000141 ORTHO05D000780 4.2e-06 55.1 106 38.7
BolC5t34441H Brassica oleracea HOM05D000141 ORTHO05D000780 5.5e-06 54.7 106 38.7
CSS0022619 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D000780 5.5e-06 54.7 98 40.8
Ca_08441_v3 Cicer arietinum L. HOM05D000141 ORTHO05D000780 5.5e-06 54.7 79 43.0
Glyma.19G137500 Glycine max HOM05D000141 ORTHO05D000780 5.5e-06 54.7 103 37.9
Actinidia22798 Actinidia chinensis HOM05D000141 ORTHO05D011930 7.2e-06 54.3 71 47.9


User provided reference genes

Program Settings