Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G247.13 Capsicum annuum HOM05D000124 ORTHO05D114859 5.4e-34 147.1 76 100.0
PGSC0003DMG400010750 Solanum tuberosum HOM05D000124 ORTHO05D000056 6.0e-17 90.5 75 62.7
Sopen03g024430 Solanum pennellii HOM05D000124 ORTHO05D000056 1.9e-15 85.5 75 62.7
Nitab4.5_0002271g0010 Nicotiana tabacum HOM05D000124 ORTHO05D000056 5.6e-15 84.0 75 62.7
Solyc03g093610.1 Solanum lycopersicum HOM05D000124 ORTHO05D000056 5.6e-15 84.0 75 61.3
Peaxi162Scf00271g00057 Petunia axillaris HOM05D000124 ORTHO05D000056 7.3e-15 83.6 76 61.8
Nitab4.5_0000600g0080 Nicotiana tabacum HOM05D000124 ORTHO05D000056 3.6e-14 81.3 75 61.3
CSS0002695 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 8.1e-14 80.1 75 54.7
CSS0027366 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 8.1e-14 80.1 75 54.7
Solyc05g052050.1 Solanum lycopersicum HOM05D000124 ORTHO05D000056 1.2e-12 76.3 75 53.3
Sopen05g030600 Solanum pennellii HOM05D000124 ORTHO05D000056 1.2e-12 76.3 75 54.7
PGSC0003DMG400016006 Solanum tuberosum HOM05D000124 ORTHO05D000056 1.5e-12 75.9 75 54.7
Rhsim03G0161000 Rhododendron simsii HOM05D000124 ORTHO05D000056 2.0e-12 75.5 75 46.7
Dinv16870 Davidia involucrata HOM05D000124 ORTHO05D000056 9.9e-12 73.2 75 52.0
Rhsim09G0189600 Rhododendron simsii HOM05D000124 ORTHO05D000056 2.9e-11 71.6 75 52.0
vmacro09923 Vaccinium macrocarpon HOM05D000124 ORTHO05D000056 2.9e-11 71.6 77 50.6
Actinidia31666 Actinidia chinensis HOM05D000124 ORTHO05D000056 4.1e-10 67.8 75 49.3
Nitab4.5_0002236g0020 Nicotiana tabacum HOM05D000124 ORTHO05D000056 5.4e-10 67.4 75 48.0
Lsat_1_v5_gn_9_50660 Lactuca sativa HOM05D000124 ORTHO05D000056 7.1e-10 67.0 77 49.4
CSS0035725 Camellia sinensis var. sinensis HOM05D000124 ORTHO05D000056 1.6e-09 65.9 77 48.1
ECA238G4777 Erigeron canadensis HOM05D000124 ORTHO05D000056 1.6e-09 65.9 76 51.3
Hma1.2p1_0502F.1_g167730 Hydrangea macrophylla HOM05D000124 ORTHO05D000056 3.5e-09 64.7 76 51.3
Oeu042528.1 Olea europaea HOM05D000124 ORTHO05D000056 1.3e-08 62.8 77 50.6
CsaV3_3G002460 Cucumis sativus L. HOM05D000124 ORTHO05D000056 3.0e-08 61.6 80 45.0
Oeu045803.1 Olea europaea HOM05D000124 ORTHO05D000056 3.0e-08 61.6 77 48.1
Oeu060855.1 Olea europaea HOM05D000124 ORTHO05D000056 5.1e-08 60.8 75 46.7
Haze_07959 Corylus avellana HOM05D000124 ORTHO05D000056 1.1e-07 59.7 89 39.3
Gohir.A12G214300 Gossypium hirsutum HOM05D000124 ORTHO05D000056 1.1e-07 59.7 75 42.7
COL.COLO4_10025 Corchorus olitorius HOM05D000124 ORTHO05D000056 2.5e-07 58.5 78 44.9
MELO3C013916.2 Cucumis melo HOM05D000124 ORTHO05D000056 2.5e-07 58.5 80 43.8
Glyma.17G145400 Glycine max HOM05D000124 ORTHO05D000056 2.5e-07 58.5 84 42.9
Gohir.D09G191300 Gossypium hirsutum HOM05D000124 ORTHO05D000056 2.5e-07 58.5 78 44.9
Gorai.008G232500 Gossypium raimondii HOM05D000124 ORTHO05D000056 2.5e-07 58.5 75 42.7
Cfa012681 Carpinus fangiana HOM05D000124 ORTHO05D000056 3.3e-07 58.2 96 38.5
Lalb_Chr05g0214301 Lupinus albus HOM05D000124 ORTHO05D000056 3.3e-07 58.2 84 40.5
Gohir.D12G216900 Gossypium hirsutum HOM05D000124 ORTHO05D000056 4.3e-07 57.8 76 42.1
Cfa012682 Carpinus fangiana HOM05D000124 ORTHO05D000056 5.6e-07 57.4 89 41.6
Gohir.A09G196700 Gossypium hirsutum HOM05D000124 ORTHO05D000056 5.6e-07 57.4 78 44.9
Hma1.2p1_0821F.1_g224210 Hydrangea macrophylla HOM05D000124 ORTHO05D000056 5.6e-07 57.4 75 44.0
Cc02_g04740 Coffea canephora HOM05D000124 ORTHO05D000056 7.3e-07 57.0 82 42.7
SalBow3G0346 Salvia bowleyana HOM05D000124 ORTHO05D000056 7.3e-07 57.0 75 49.3
SalBow3G0583 Salvia bowleyana HOM05D000124 ORTHO05D000056 7.3e-07 57.0 75 49.3
Haze_07958 Corylus avellana HOM05D000124 ORTHO05D000056 9.6e-07 56.6 89 41.6
MD06G1051800 Malus domestica HOM05D000124 ORTHO05D000056 9.6e-07 56.6 79 40.5
Peaxi162Scf00167g00082 Petunia axillaris HOM05D000124 ORTHO05D000056 9.6e-07 56.6 76 47.4
MSTRG.8405 Avicennia marina HOM05D000124 ORTHO05D000056 1.2e-06 56.2 75 46.7
Lalb_Chr09g0324281 Lupinus albus HOM05D000124 ORTHO05D000056 1.2e-06 56.2 81 39.5
MSTRG.8850 Avicennia marina HOM05D000124 ORTHO05D000056 1.6e-06 55.8 75 48.0
Lj2g0007811 Lotus japonicus HOM05D000124 ORTHO05D000056 1.6e-06 55.8 76 40.8
Actinidia01043 Actinidia chinensis HOM05D000124 ORTHO05D000056 2.1e-06 55.5 71 46.5
ClCG10G002440 Citrullus lanatus HOM05D000124 ORTHO05D000056 2.1e-06 55.5 84 42.9
Prupe.5G061800 Prunus persica HOM05D000124 ORTHO05D000056 2.1e-06 55.5 85 37.6
MSTRG.143 Avicennia marina HOM05D000124 ORTHO05D000056 2.8e-06 55.1 76 47.4
Duzib205G1928 Durio zibethinus HOM05D000124 ORTHO05D000056 2.8e-06 55.1 75 45.3
Lalb_Chr16g0386531 Lupinus albus HOM05D000124 ORTHO05D000056 2.8e-06 55.1 75 41.3
Nitab4.5_0002211g0030 Nicotiana tabacum HOM05D000124 ORTHO05D000056 2.8e-06 55.1 67 43.3
Dinv28847 Davidia involucrata HOM05D000124 ORTHO05D000056 3.6e-06 54.7 86 39.5
Dinv39187 Davidia involucrata HOM05D000124 ORTHO05D000056 3.6e-06 54.7 86 39.5
Duzib084G0693 Durio zibethinus HOM05D000124 ORTHO05D000056 3.6e-06 54.7 78 39.7
Hma1.2p1_1305F.1_g274590 Hydrangea macrophylla HOM05D000124 ORTHO05D000056 3.6e-06 54.7 89 42.7
TAR375G0296 Trochodendron aralioides HOM05D000124 ORTHO05D000056 3.6e-06 54.7 85 37.6
arahy.Tifrunner.gnm1.ann1.4XS3FZ Arachis hypogaea HOM05D000124 ORTHO05D000056 4.7e-06 54.3 85 35.3
arahy.Tifrunner.gnm1.ann1.ZW7540 Arachis hypogaea HOM05D000124 ORTHO05D000056 4.7e-06 54.3 85 35.3
Dinv21678 Davidia involucrata HOM05D000124 ORTHO05D000056 4.7e-06 54.3 78 46.2
Gorai.006G214100 Gossypium raimondii HOM05D000124 ORTHO05D000056 4.7e-06 54.3 78 39.7
Atru.chr9.1249 Acer truncatum HOM05D000124 ORTHO05D000056 8.1e-06 53.5 75 40.0


User provided reference genes

Program Settings