Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G247.12 Capsicum annuum HOM05D000202 ORTHO05D000117 1.7e-54 215.7 107 100.0
PGSC0003DMG400018798 Solanum tuberosum HOM05D000202 ORTHO05D000117 1.4e-27 126.3 78 82.1
Sopen03g024490 Solanum pennellii HOM05D000202 ORTHO05D000117 5.8e-26 120.9 78 78.2
Solyc03g093620.1 Solanum lycopersicum HOM05D000202 ORTHO05D000117 4.9e-25 117.9 77 76.6
Nitab4.5_0000600g0100 Nicotiana tabacum HOM05D000202 ORTHO05D000117 1.8e-22 109.4 79 68.4
Nitab4.5_0010435g0040 Nicotiana tabacum HOM05D000202 ORTHO05D000117 1.8e-19 99.4 77 64.9
Peaxi162Scf00271g00055 Petunia axillaris HOM05D000202 ORTHO05D000117 3.4e-18 95.1 77 62.3
Migut.F01203 Erythranthe guttata HOM05D000202 ORTHO05D000117 7.1e-16 87.4 65 56.9
Cc02_g04770 Coffea canephora HOM05D000202 ORTHO05D000117 1.3e-14 83.2 54 64.8
Migut.F01202 Erythranthe guttata HOM05D000202 ORTHO05D000117 3.0e-14 82.0 72 52.8
SGA_v2.0_scaffold56G19904 Striga asiatica HOM05D000202 ORTHO05D000117 1.1e-13 80.1 51 68.6
Dinv16871 Davidia involucrata HOM05D000202 ORTHO05D000117 7.4e-13 77.4 72 52.8
Oeu021665.1 Olea europaea HOM05D000202 ORTHO05D000117 2.1e-12 75.9 51 64.7
SGA_v2.0_scaffold56G19899 Striga asiatica HOM05D000202 ORTHO05D000117 2.8e-12 75.5 72 50.0
MSTRG.8404 Avicennia marina HOM05D000202 ORTHO05D000117 3.7e-12 75.1 51 66.7
SalBow7G1326 Salvia bowleyana HOM05D000202 ORTHO05D000117 6.2e-12 74.3 51 60.8
Oeu006084.1 Olea europaea HOM05D000202 ORTHO05D000117 2.4e-11 72.4 67 52.2
Oeu046445.1 Olea europaea HOM05D000202 ORTHO05D000117 4.0e-11 71.6 50 62.0
Dinv16872 Davidia involucrata HOM05D000202 ORTHO05D000117 2.6e-10 68.9 64 48.4
Oeu021668.1 Olea europaea HOM05D000202 ORTHO05D000117 1.0e-09 67.0 44 63.6
Migut.O00366 Erythranthe guttata HOM05D000202 ORTHO05D000117 1.4e-08 63.2 41 68.3
Dinv03827 Davidia involucrata HOM05D000202 ORTHO05D000117 4.2e-08 61.6 55 45.5
Dinv08576 Davidia involucrata HOM05D000202 ORTHO05D000117 4.2e-08 61.6 55 45.5
Eucgr.L01918 Eucalyptus grandis HOM05D000202 ORTHO05D000117 5.5e-08 61.2 65 41.5
Hma1.2p1_0187F.1_g081930 Hydrangea macrophylla HOM05D000202 ORTHO05D000117 7.1e-08 60.8 75 37.3
Aqoxy3G03707 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 9.3e-08 60.5 94 34.0
Dinv03825 Davidia involucrata HOM05D000202 ORTHO05D000117 9.3e-08 60.5 61 41.0
Dinv33867 Davidia involucrata HOM05D003991 ORTHO05D004883 1.2e-07 60.1 58 44.8
SalBow5G2059 Salvia bowleyana HOM05D000202 ORTHO05D000117 1.2e-07 60.1 68 44.1
Oeu006083.1 Olea europaea HOM05D000202 ORTHO05D000117 1.6e-07 59.7 73 41.1
Prupe.2G072600 Prunus persica HOM05D000202 ORTHO05D000117 1.6e-07 59.7 68 39.7
TWI60G0404 Tripterygium wilfordii HOM05D000202 ORTHO05D000117 1.6e-07 59.7 67 38.8
Dinv08578 Davidia involucrata HOM05D000202 ORTHO05D000117 2.1e-07 59.3 55 43.6
Aqoxy3G03708 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 3.5e-07 58.5 68 35.3
Aqoxy1G03438 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 7.9e-07 57.4 68 35.3
Aqoxy2G02143 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 7.9e-07 57.4 68 35.3
Aqoxy390s001 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 7.9e-07 57.4 68 35.3
CSS0033136 Camellia sinensis var. sinensis HOM05D000202 ORTHO05D000117 7.9e-07 57.4 69 33.3
Cc03_g08020 Coffea canephora HOM05D000202 ORTHO05D000117 7.9e-07 57.4 54 37.0
TWI60G1547 Tripterygium wilfordii HOM05D000202 ORTHO05D000117 7.9e-07 57.4 61 39.3
EL10Ac8g20207 Beta vulgaris HOM05D000202 ORTHO05D000117 1.0e-06 57.0 81 40.7
Aqoxy3G02878 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 1.3e-06 56.6 83 33.7
TWI60G1229 Tripterygium wilfordii HOM05D000202 ORTHO05D000117 1.3e-06 56.6 55 43.6
EL10Ac8g20209 Beta vulgaris HOM05D000202 ORTHO05D000117 1.8e-06 56.2 81 40.7
Aqoxy3G01905 Aquilegia oxysepala HOM05D000202 ORTHO05D000117 2.3e-06 55.8 57 40.4
Cfa010521 Carpinus fangiana HOM05D000202 ORTHO05D000117 2.3e-06 55.8 55 45.5
Psat0s2711g0160 Pisum sativum HOM05D000202 ORTHO05D000117 3.0e-06 55.5 61 41.0
EL10Ac8g20206 Beta vulgaris HOM05D000202 ORTHO05D000117 3.9e-06 55.1 81 39.5
EL10Ac8g20208 Beta vulgaris HOM05D000202 ORTHO05D000117 3.9e-06 55.1 81 39.5
CiPaw.13G044000 Carya illinoinensis HOM05D000202 ORTHO05D000117 3.9e-06 55.1 55 43.6
Psat0s2711g0040 Pisum sativum HOM05D000202 ORTHO05D000117 3.9e-06 55.1 60 38.3
CSS0034284 Camellia sinensis var. sinensis HOM05D000202 ORTHO05D000117 5.1e-06 54.7 69 36.2
COL.COLO4_08806 Corchorus olitorius HOM05D000202 ORTHO05D000117 5.1e-06 54.7 75 38.7
Eucgr.C01948 Eucalyptus grandis HOM05D000202 ORTHO05D000117 5.1e-06 54.7 67 38.8
Eucgr.C01959 Eucalyptus grandis HOM05D000202 ORTHO05D000117 5.1e-06 54.7 67 38.8
Gohir.A06G169900 Gossypium hirsutum HOM05D000202 ORTHO05D000117 5.1e-06 54.7 89 34.8
Cc02_g09340 Coffea canephora HOM05D000202 ORTHO05D000117 6.7e-06 54.3 79 34.2
Eucgr.C01660 Eucalyptus grandis HOM05D000202 ORTHO05D000117 6.7e-06 54.3 67 38.8
ATR0739G059 Amborella trichopoda HOM05D000202 ORTHO05D000117 8.7e-06 53.9 57 38.6
AUR62003061 Chenopodium quinoa HOM05D000202 ORTHO05D000117 8.7e-06 53.9 61 37.7
Eucgr.C01647 Eucalyptus grandis HOM05D000202 ORTHO05D000117 8.7e-06 53.9 67 37.3
Gohir.D06G177600 Gossypium hirsutum HOM05D000202 ORTHO05D000117 8.7e-06 53.9 88 35.2
Gorai.N007700 Gossypium raimondii HOM05D000202 ORTHO05D000117 8.7e-06 53.9 88 35.2
Hma1.2p1_1837F.1_g304770 Hydrangea macrophylla HOM05D000202 ORTHO05D000117 8.7e-06 53.9 54 42.6
Thecc.10G117400 Theobroma cacao HOM05D000202 ORTHO05D000117 8.7e-06 53.9 61 42.6
Thecc.10G142000 Theobroma cacao HOM05D000202 ORTHO05D000117 8.7e-06 53.9 85 36.5


User provided reference genes

Program Settings