Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G246.5 Capsicum annuum HOM05D007388 ORTHO05D009421 3.8e-117 424.9 217 100.0
PGSC0003DMG400027673 Solanum tuberosum HOM05D007388 ORTHO05D009421 2.0e-86 322.8 217 80.6
Sopen06g034360 Solanum pennellii HOM05D007388 ORTHO05D009421 3.3e-84 315.5 217 77.4
Solyc06g082970.3 Solanum lycopersicum HOM05D007388 ORTHO05D009421 2.8e-83 312.4 217 76.5
Nitab4.5_0001705g0020 Nicotiana tabacum HOM05D007388 ORTHO05D009421 1.0e-77 293.9 220 74.1
Peaxi162Scf00596g00105 Petunia axillaris HOM05D007388 ORTHO05D009421 6.4e-72 274.6 211 71.6
Nitab4.5_0000268g0090 Nicotiana tabacum HOM05D007388 ORTHO05D009421 8.9e-58 227.6 220 60.9
CSS0004113 Camellia sinensis var. sinensis HOM05D007388 ORTHO05D009421 1.6e-54 216.9 164 65.9
PGR044G0912 Punica granatum HOM05D007388 ORTHO05D009421 2.3e-53 213.0 172 63.4
Manes.16G084900 Manihot esculenta HOM05D007388 ORTHO05D009421 3.0e-53 212.6 214 55.1
MSTRG.25983 Avicennia marina HOM05D007388 ORTHO05D009421 5.1e-53 211.8 178 63.5
MD15G1051600 Malus domestica HOM05D007388 ORTHO05D009421 8.7e-53 211.1 216 55.6
Dinv41838 Davidia involucrata HOM05D007388 ORTHO05D009421 1.5e-52 210.3 179 62.0
Eucgr.C03150 Eucalyptus grandis HOM05D007388 ORTHO05D009421 1.9e-52 209.9 220 54.5
TAR383G1008 Trochodendron aralioides HOM05D007388 ORTHO05D009421 3.3e-52 209.1 219 56.6
QL02p016663 Quercus lobata HOM05D007388 ORTHO05D009421 7.3e-52 208.0 218 53.7
COL.COLO4_21128 Corchorus olitorius HOM05D007388 ORTHO05D009421 9.6e-52 207.6 215 55.3
Potri.006G221900 Populus trichocarpa HOM05D007388 ORTHO05D009421 9.6e-52 207.6 180 60.6
Sabra06G0171500 Salix brachista HOM05D007388 ORTHO05D009421 1.3e-51 207.2 214 54.2
TWI63G1062 Tripterygium wilfordii HOM05D007388 ORTHO05D009421 1.6e-51 206.8 213 54.0
Atru.chr7.1857 Acer truncatum HOM05D007388 ORTHO05D009421 2.1e-51 206.5 218 54.1
CiPaw.16G070200 Carya illinoinensis HOM05D007388 ORTHO05D009421 2.8e-51 206.1 202 58.9
GSVIVG01035454001 Vitis vinifera HOM05D007388 ORTHO05D009421 4.8e-51 205.3 171 61.4
HanXRQChr04g0097861 Helianthus annuus HOM05D007388 ORTHO05D009421 1.1e-50 204.1 172 62.2
Migut.A00083 Erythranthe guttata HOM05D007388 ORTHO05D009421 5.3e-50 201.8 210 52.9
Gohir.A05G039100 Gossypium hirsutum HOM05D007388 ORTHO05D009421 5.3e-50 201.8 213 54.0
CsaV3_4G036020 Cucumis sativus L. HOM05D007388 ORTHO05D009421 4.5e-49 198.7 201 53.7
Gohir.D05G040600 Gossypium hirsutum HOM05D007388 ORTHO05D009421 4.5e-49 198.7 213 53.5
MELO3C016910.2 Cucumis melo HOM05D007388 ORTHO05D009421 9.9e-49 197.6 185 56.8
Sed0027665 Sechium edule HOM05D007388 ORTHO05D009421 9.9e-49 197.6 190 56.3
Ciclev10009451m.g Citrus clementina HOM05D007388 ORTHO05D009421 2.9e-48 196.1 181 59.7
Nn8g38703 Nelumbo nucifera HOM05D007388 ORTHO05D009421 2.9e-48 196.1 180 59.4
AUR62009088 Chenopodium quinoa HOM05D007388 ORTHO05D009421 6.4e-48 194.9 159 62.3
AUR62020582 Chenopodium quinoa HOM05D007388 ORTHO05D009421 6.4e-48 194.9 159 62.3
Medtr3g104980 Medicago truncatula HOM05D007388 ORTHO05D009421 6.4e-48 194.9 210 52.9
RcHm_v2.0_Chr6g0311651 Rosa chinensis HOM05D007388 ORTHO05D009421 1.1e-47 194.1 216 51.9
ECA240G1505 Erigeron canadensis HOM05D007388 ORTHO05D009421 3.2e-47 192.6 223 47.1
Lalb_Chr11g0063321 Lupinus albus HOM05D007388 ORTHO05D009421 3.2e-47 192.6 169 59.2
Duzib168G1804 Durio zibethinus HOM05D007388 ORTHO05D009421 4.2e-47 192.2 211 51.7
THA.LOC104799581 Tarenaya hassleriana HOM05D007388 ORTHO05D009421 7.1e-47 191.4 207 51.7
Actinidia25694 Actinidia chinensis HOM05D007388 ORTHO05D009421 9.3e-47 191.0 165 61.2
TPR.G3529 Trifolium pratense HOM05D007388 ORTHO05D009421 1.2e-46 190.7 175 54.9
FvH4_2g31130 Fragaria vesca HOM05D007388 ORTHO05D009421 2.1e-46 189.9 218 50.5
Cfa018015 Carpinus fangiana HOM05D007388 ORTHO05D009421 1.0e-45 187.6 213 51.2
FAN24G3326 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.3e-45 187.2 218 49.1
ClCG05G015710 Citrullus lanatus HOM05D007388 ORTHO05D009421 1.8e-45 186.8 202 53.0
FAN20G0472 Fragaria x ananassa HOM05D007388 ORTHO05D009421 2.3e-45 186.4 175 56.0
Psat5g102720 Pisum sativum HOM05D007388 ORTHO05D009421 3.0e-45 186.0 169 56.2
AT5G21430 Arabidopsis thaliana HOM05D007388 ORTHO05D009421 6.7e-45 184.9 171 55.6
ATR0598G070 Amborella trichopoda HOM05D007388 ORTHO05D009421 1.9e-44 183.3 178 53.4
BcaB08g36472 Brassica carinata HOM05D007388 ORTHO05D009421 3.3e-44 182.6 183 51.9
Sp6g23310 Schrenkiella parvula HOM05D007388 ORTHO05D009421 4.3e-44 182.2 217 47.9
AL6G32850 Arabidopsis lyrata HOM05D007388 ORTHO05D009421 5.6e-44 181.8 171 55.0
Carub.0006s1952 Capsella rubella HOM05D007388 ORTHO05D009421 7.4e-44 181.4 219 46.1
Lj1g0010451 Lotus japonicus HOM05D007388 ORTHO05D009421 9.6e-44 181.0 204 50.0
FAN27G0155 Fragaria x ananassa HOM05D007388 ORTHO05D009421 1.3e-43 180.6 237 46.0
A10p18840 Brassica napus HOM05D007388 ORTHO05D009421 2.1e-43 179.9 198 48.0
BcaC04g19512 Brassica carinata HOM05D007388 ORTHO05D009421 2.8e-43 179.5 198 48.0
C09p54850 Brassica napus HOM05D007388 ORTHO05D009421 2.8e-43 179.5 198 48.0
BolC9t58346H Brassica oleracea HOM05D007388 ORTHO05D009421 2.8e-43 179.5 198 48.0
CARHR191660 Cardamine hirsuta HOM05D007388 ORTHO05D009421 2.8e-43 179.5 206 49.0
PSO421G0687 Papaver somniferum HOM05D007388 ORTHO05D009421 2.8e-43 179.5 171 57.3
Rhsim10G0152000 Rhododendron simsii HOM05D007388 ORTHO05D009421 2.8e-43 179.5 147 61.9
Thhalv10014636m.g Eutrema salsugineum HOM05D007388 ORTHO05D009421 6.2e-43 178.3 205 50.2
BraA10t43964Z Brassica rapa HOM05D007388 ORTHO05D009421 8.1e-43 177.9 198 48.0
Cc08_g01260 Coffea canephora HOM05D007388 ORTHO05D009421 8.1e-43 177.9 151 60.9
DCAR_003716 Daucus carota HOM05D007388 ORTHO05D009421 1.1e-42 177.6 193 50.8
Oeu000765.1 Olea europaea HOM05D007388 ORTHO05D009421 1.4e-42 177.2 272 43.0
Prupe.1G405600 Prunus persica HOM05D007388 ORTHO05D009421 1.8e-42 176.8 210 50.0
Thecc.09G062100 Theobroma cacao HOM05D007388 ORTHO05D009421 3.1e-42 176.0 215 50.2
VMungo1309G3057 Vigna mungo HOM05D007388 ORTHO05D009421 6.9e-42 174.9 174 56.3
Aa31LG1G13520 Aethionema arabicum HOM05D007388 ORTHO05D009421 9.0e-42 174.5 218 47.2
Atru.BG.20.p Acer truncatum HOM05D007388 ORTHO05D009421 1.2e-41 174.1 128 68.0
CDE06G1148 Ceratophyllum demersum HOM05D007388 ORTHO05D009421 1.2e-41 174.1 151 60.3
Glyma.04G055400 Glycine max HOM05D007388 ORTHO05D009421 1.2e-41 174.1 217 48.8
Glyma.06G055600 Glycine max HOM05D007388 ORTHO05D009421 4.5e-41 172.2 221 47.5
Phvul.009G081500 Phaseolus vulgaris HOM05D007388 ORTHO05D009421 5.8e-41 171.8 216 47.7
MBI19_g11844_MAGBIO Magnolia biondii HOM05D007388 ORTHO05D009421 9.9e-41 171.0 143 61.5
arahy.Tifrunner.gnm1.ann1.P6UV73 Arachis hypogaea HOM05D007388 ORTHO05D009421 1.9e-39 166.8 212 48.1
CANSAT25G2576 Cannabis sativa HOM05D007388 ORTHO05D009421 1.9e-39 166.8 144 61.1
Os12g0498500 Oryza sativa ssp. japonica HOM05D007388 ORTHO05D009421 3.2e-39 166.0 145 59.3
Gorai.009G041100 Gossypium raimondii HOM05D007388 ORTHO05D009421 1.2e-38 164.1 186 51.6
Lsat_1_v5_gn_7_58400 Lactuca sativa HOM05D007388 ORTHO05D009421 1.6e-38 163.7 140 60.0
Zm00001eb409580 Zea mays HOM05D007388 ORTHO05D009421 4.6e-38 162.2 175 53.1
EL10Ac2g03792 Beta vulgaris HOM05D007388 ORTHO05D009421 7.9e-38 161.4 130 63.8
arahy.Tifrunner.gnm1.ann1.044LWD Arachis hypogaea HOM05D000560 ORTHO05D000417 2.3e-37 159.8 212 47.2
Lj7C227T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.3e-36 156.0 210 47.1
CDE07G0202 Ceratophyllum demersum HOM05D007388 ORTHO05D001048 2.8e-35 152.9 180 49.4
vmacro12914 Vaccinium macrocarpon HOM05D007388 ORTHO05D009421 4.0e-34 149.1 152 53.9
Lj7C225T7 Lonicera japonica HOM05D007388 ORTHO05D009421 3.4e-33 146.0 210 45.7
Aqoxy7G01075 Aquilegia oxysepala HOM05D007388 ORTHO05D009421 4.5e-33 145.6 174 47.7
Ca_15836_v3 Cicer arietinum L. HOM05D007388 ORTHO05D009421 1.1e-31 141.0 157 47.8
unitig_4.g30329 Utricularia gibba HOM05D007388 ORTHO05D009421 1.1e-23 114.4 157 45.9
Hma1.2p1_0231F.1_g097390 Hydrangea macrophylla HOM05D007388 ORTHO05D009421 2.7e-22 109.8 99 57.6
Pp3c12_9640 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.3e-21 107.5 212 37.3
Pp3c4_14700 Physcomitrium patens HOM05D007388 ORTHO05D009421 1.8e-21 107.1 202 36.1
AagrBONN_evm.TU.Sc2ySwM_368.3296 Anthoceros agrestis HOM05D007388 ORTHO05D009421 2.3e-21 106.7 172 38.4
Mapoly0129s0003 Marchantia polymorpha HOM05D007388 ORTHO05D009421 1.4e-15 87.4 175 35.4
SMO223G0044 Selaginella moellendorffii HOM05D007480 ORTHO05D009460 2.2e-08 63.5 125 32.0
BNapus_Darmor_BZH_scaffold_38p01020 Brassica napus HOM05D007388 ORTHO05D009421 4.7e-06 55.8 65 46.2


User provided reference genes

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