Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.3e-45 186.0 91 100.0
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.3e-31 139.4 82 81.7
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 4.3e-30 134.4 83 80.7
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 4.3e-30 134.4 83 80.7
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 9.6e-30 133.3 83 80.7
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 3.4e-27 124.8 83 71.1
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.3e-26 122.9 84 72.6
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 6.5e-26 120.6 84 71.4
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.0e-23 113.2 82 61.0
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.0e-23 113.2 82 61.0
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.3e-22 107.8 84 59.5
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.3e-22 107.8 84 59.5
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 5.7e-22 107.5 84 59.5
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.8e-21 105.1 87 60.9
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 2.4e-20 102.1 78 61.5
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 6.9e-20 100.5 83 59.0
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 9.0e-20 100.1 84 56.0
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 2.0e-19 99.0 85 60.0
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 2.6e-19 98.6 77 64.9
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 7.6e-19 97.1 83 57.8
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.3e-18 96.3 83 54.2
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.7e-18 95.9 77 57.1
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 2.2e-18 95.5 87 55.2
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 2.2e-18 95.5 86 58.1
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 2.2e-18 95.5 78 59.0
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.9e-18 95.1 83 56.6
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 3.8e-18 94.7 83 53.0
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 8.5e-18 93.6 87 52.9
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 4.2e-17 91.3 88 53.4
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 5.5e-17 90.9 86 57.0
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 7.2e-17 90.5 89 58.4
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 9.3e-17 90.1 89 56.2
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 1.2e-16 89.7 86 55.8
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.2e-16 89.7 82 56.1
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 2.1e-16 89.0 80 56.2
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.1e-16 89.0 84 54.8
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 2.7e-16 88.6 78 57.7
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.7e-16 88.6 90 48.9
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.7e-16 88.6 89 55.1
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 4.6e-16 87.8 84 52.4
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 6.1e-16 87.4 90 51.1
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 6.1e-16 87.4 84 53.6
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 7.9e-16 87.0 83 50.6
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 7.9e-16 87.0 83 56.6
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.0e-15 86.7 86 53.5
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.8e-15 85.9 88 52.3
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 5.1e-15 84.3 91 51.6
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 5.1e-15 84.3 89 51.7
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 6.7e-15 84.0 86 52.3
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 8.8e-15 83.6 82 56.1
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.5e-14 82.8 80 55.0
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.9e-14 82.4 85 48.2
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.9e-14 82.4 96 49.0
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 3.3e-14 81.6 84 52.4
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 3.3e-14 81.6 84 51.2
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.7e-14 80.9 85 48.2
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.3e-13 79.7 82 51.2
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 1.3e-13 79.7 78 53.8
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.3e-13 79.7 90 47.8
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.3e-13 79.7 84 53.6
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.7e-13 79.3 82 52.4
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.7e-13 79.3 84 51.2
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 2.2e-13 79.0 74 55.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.2e-13 79.0 85 47.1
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 2.8e-13 78.6 84 52.4
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.7e-13 78.2 87 48.3
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 3.7e-13 78.2 82 50.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 4.8e-13 77.8 82 52.4
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 4.8e-13 77.8 82 52.4
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 4.8e-13 77.8 88 53.4
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 6.3e-13 77.4 84 50.0
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 6.3e-13 77.4 84 50.0
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 6.3e-13 77.4 84 50.0
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 8.2e-13 77.0 94 51.1
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.1e-12 76.6 82 51.2
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 1.8e-12 75.9 84 48.8
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 2.4e-12 75.5 80 51.2
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 3.1e-12 75.1 85 49.4
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 5.3e-12 74.3 92 43.5
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 6.9e-12 73.9 89 46.1
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.9e-12 73.9 89 46.1
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 6.9e-12 73.9 89 46.1
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 9.1e-12 73.6 99 45.5
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 9.1e-12 73.6 85 43.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 9.1e-12 73.6 92 43.5
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 9.1e-12 73.6 86 51.2
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.2e-11 73.2 85 50.6
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 1.2e-11 73.2 92 43.5
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.2e-11 73.2 85 47.1
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.5e-11 72.8 85 49.4
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.6e-11 72.0 85 49.4
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 3.4e-11 71.6 92 42.4
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 7.7e-11 70.5 83 49.4
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.0e-10 70.1 83 51.8
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.0e-10 70.1 84 46.4
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 5.0e-10 67.8 90 42.2
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.1e-09 66.6 89 47.2
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.5e-09 65.5 92 41.3
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 4.2e-09 64.7 52 63.5
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 5.5e-09 64.3 59 57.6
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.5e-09 64.3 52 63.5
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.6e-08 62.8 51 60.8
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 1.6e-08 62.8 63 52.4
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.3e-07 58.9 85 44.7
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 3.0e-07 58.5 58 56.9
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 5.1e-07 57.8 81 44.4
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 6.7e-07 57.4 58 53.4
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.5e-06 56.2 90 38.9
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 2.0e-06 55.8 57 56.1
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 5.7e-06 54.3 41 63.4


User provided reference genes

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