Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G243.4 Capsicum annuum HOM05D002493 ORTHO05D003175 2.3e-117 425.6 220 100.0
CAN.G960.68 Capsicum annuum HOM05D002493 ORTHO05D003175 1.3e-35 154.1 95 84.2
Peaxi162Scf00003g05036 Petunia axillaris HOM05D002493 ORTHO05D003175 2.6e-28 129.8 115 62.6
Peaxi162Scf00003g05132 Petunia axillaris HOM05D002493 ORTHO05D003175 2.6e-28 129.8 115 62.6
Peaxi162Scf00003g05135 Petunia axillaris HOM05D002493 ORTHO05D003175 2.6e-28 129.8 115 62.6
Nitab4.5_0000812g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 2.4e-26 123.2 110 61.8
Nitab4.5_0002869g0070 Nicotiana tabacum HOM05D002493 ORTHO05D003175 2.0e-25 120.2 110 60.0
Sopen10g029010 Solanum pennellii HOM05D002493 ORTHO05D003175 2.3e-21 106.7 99 60.6
PGSC0003DMG400035998 Solanum tuberosum HOM05D002493 ORTHO05D003175 6.8e-21 105.1 95 61.1
Solyc10g078350.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 1.3e-19 100.9 99 57.6
Nitab4.5_0007477g0010 Nicotiana tabacum HOM05D002493 ORTHO05D003175 2.9e-19 99.8 132 47.0
Nitab4.5_0000062g0160 Nicotiana tabacum HOM05D002493 ORTHO05D003175 1.1e-18 97.8 132 47.0
PGSC0003DMG400028192 Solanum tuberosum HOM05D002493 ORTHO05D003175 2.4e-18 96.7 106 54.7
Sopen10g031440 Solanum pennellii HOM05D002493 ORTHO05D003175 3.2e-18 96.3 106 53.8
Solyc10g080930.2 Solanum lycopersicum HOM05D002493 ORTHO05D003175 1.6e-17 94.0 106 52.8
Peaxi162Scf01487g00006 Petunia axillaris HOM05D002493 ORTHO05D003175 2.7e-17 93.2 106 52.8
CAN.G128.85 Capsicum annuum HOM05D002493 ORTHO05D003175 2.3e-16 90.1 126 46.8
CSS0019053 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 7.3e-15 85.1 120 48.3
Solyc03g044350.3 Solanum lycopersicum HOM05D002493 ORTHO05D003175 9.5e-15 84.7 106 50.0
QL07p012378 Quercus lobata HOM05D002493 ORTHO05D003175 2.1e-14 83.6 109 47.7
Atru.chr1.1386 Acer truncatum HOM05D002493 ORTHO05D003175 4.0e-13 79.3 96 49.0
Cc00_g10950 Coffea canephora HOM05D002493 ORTHO05D003175 5.2e-13 79.0 116 44.8
Dinv21482 Davidia involucrata HOM05D002493 ORTHO05D003175 2.0e-12 77.0 127 42.5
Ciclev10011717m.g Citrus clementina HOM05D002493 ORTHO05D003175 7.5e-12 75.1 113 46.0
Prupe.7G028700 Prunus persica HOM05D002493 ORTHO05D003175 9.8e-12 74.7 114 45.6
CiPaw.10G042500 Carya illinoinensis HOM05D002493 ORTHO05D003175 2.9e-11 73.2 113 46.0
Duzib106G0075 Durio zibethinus HOM05D002493 ORTHO05D003175 3.7e-11 72.8 97 49.5
Sc13g0000980 Simmondsia chinensis HOM05D002493 ORTHO05D003175 8.3e-11 71.6 112 44.6
Cpa.g.sc92.76 Carica papaya HOM05D002493 ORTHO05D003175 1.9e-10 70.5 116 41.4
AUR62018377 Chenopodium quinoa HOM05D002493 ORTHO05D003175 3.2e-10 69.7 109 45.0
MD14G1088300 Malus domestica HOM05D002493 ORTHO05D003175 4.1e-10 69.3 91 48.4
Duzib128G0587 Durio zibethinus HOM05D002493 ORTHO05D003175 7.0e-10 68.6 97 48.5
Lalb_Chr22g0357761 Lupinus albus HOM05D002493 ORTHO05D003175 2.7e-09 66.6 110 45.5
AUR62030285 Chenopodium quinoa HOM05D002493 ORTHO05D003175 4.6e-09 65.9 109 42.2
Phvul.007G239100 Phaseolus vulgaris HOM05D002493 ORTHO05D003175 7.8e-09 65.1 108 40.7
Manes.08G061400 Manihot esculenta HOM05D002493 ORTHO05D003175 1.0e-08 64.7 110 36.4
Glyma.02G157800 Glycine max HOM05D002493 ORTHO05D003175 1.7e-08 63.9 122 40.2
Glyma.03G124700 Glycine max HOM05D002493 ORTHO05D003175 3.0e-08 63.2 100 45.0
Lalb_Chr02g0156621 Lupinus albus HOM05D002493 ORTHO05D003175 3.9e-08 62.8 122 40.2
MSTRG.19785 Avicennia marina HOM05D002493 ORTHO05D003175 5.0e-08 62.4 118 39.0
Lalb_Chr14g0365651 Lupinus albus HOM05D002493 ORTHO05D003175 5.0e-08 62.4 96 45.8
Gohir.D11G321900 Gossypium hirsutum HOM05D002493 ORTHO05D003175 6.6e-08 62.0 97 44.3
Lj2C403T6 Lonicera japonica HOM05D002493 ORTHO05D003175 8.6e-08 61.6 104 43.3
Gorai.007G352000 Gossypium raimondii HOM05D002493 ORTHO05D003175 2.5e-07 60.1 115 40.0
EL10Ac3g07266 Beta vulgaris HOM05D002493 ORTHO05D003175 3.3e-07 59.7 110 40.0
Medtr7g089140 Medicago truncatula HOM05D002493 ORTHO05D003175 3.3e-07 59.7 96 40.6
Oeu024613.1 Olea europaea HOM05D002493 ORTHO05D003175 3.3e-07 59.7 67 44.8
SalBow6G2849 Salvia bowleyana HOM05D002493 ORTHO05D003175 4.3e-07 59.3 67 46.3
Thecc.05G121400 Theobroma cacao HOM05D002493 ORTHO05D003175 4.3e-07 59.3 97 44.3
Hma1.2p1_0254F.1_g103210 Hydrangea macrophylla HOM05D002493 ORTHO05D003175 7.3e-07 58.5 120 40.8
Nn7g36909 Nelumbo nucifera HOM05D002493 ORTHO05D003175 7.3e-07 58.5 96 40.6
Potri.016G033300 Populus trichocarpa HOM05D002493 ORTHO05D003175 7.3e-07 58.5 73 47.9
VMungo0720G0912 Vigna mungo HOM05D002493 ORTHO05D003175 7.3e-07 58.5 93 43.0
Glyma.19G127800 Glycine max HOM05D002493 ORTHO05D003175 9.5e-07 58.2 99 43.4
FvH4_6g37520 Fragaria vesca HOM05D002493 ORTHO05D003175 1.6e-06 57.4 38 63.2
FAN14G2978 Fragaria x ananassa HOM05D002493 ORTHO05D003175 1.6e-06 57.4 38 63.2
RcHm_v2.0_Chr2g0150411 Rosa chinensis HOM05D002493 ORTHO05D003175 1.6e-06 57.4 38 63.2
Oeu005221.1 Olea europaea HOM05D002493 ORTHO05D003175 2.1e-06 57.0 138 34.8
unitig_21.g20685 Utricularia gibba HOM05D002493 ORTHO05D003175 2.1e-06 57.0 67 44.8
CSS0008643 Camellia sinensis var. sinensis HOM05D002493 ORTHO05D003175 2.8e-06 56.6 106 41.5
Ca_12358_v3 Cicer arietinum L. HOM05D002493 ORTHO05D003175 2.8e-06 56.6 48 60.4
Manes.09G002800 Manihot esculenta HOM05D002493 ORTHO05D003175 2.8e-06 56.6 120 36.7
Gohir.A11G306400 Gossypium hirsutum HOM05D002493 ORTHO05D003175 3.6e-06 56.2 42 57.1
MBI19_g07500_MAGBIO Magnolia biondii HOM05D002493 ORTHO05D003175 4.7e-06 55.8 47 55.3
GSVIVG01025776001 Vitis vinifera HOM05D002493 ORTHO05D003175 4.7e-06 55.8 110 37.3


User provided reference genes

Program Settings