Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G243.33 Capsicum annuum HOM05D002560 ORTHO05D022192 2.1e-76 288.9 139 100.0
Solyc10g076270.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 6.4e-49 197.6 128 75.0
Peaxi162Scf00744g00021 Petunia axillaris HOM05D002560 ORTHO05D003782 1.2e-47 193.4 123 78.0
Sopen10g027940 Solanum pennellii HOM05D002560 ORTHO05D003782 1.2e-47 193.4 128 73.4
Solyc09g014780.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 1.0e-46 190.3 123 75.6
Sopen09g007660 Solanum pennellii HOM05D002560 ORTHO05D003782 1.0e-46 190.3 123 75.6
Nitab4.5_0002009g0040 Nicotiana tabacum HOM05D002560 ORTHO05D003782 1.7e-46 189.5 128 75.8
CSS0041781 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 5.0e-46 188.0 128 68.8
CAN.G1189.1 Capsicum annuum HOM05D002560 ORTHO05D003782 5.0e-46 188.0 123 75.6
CAN.G133.1 Capsicum annuum HOM05D002560 ORTHO05D003782 5.0e-46 188.0 123 75.6
Nitab4.5_0004394g0020 Nicotiana tabacum HOM05D002560 ORTHO05D003782 6.6e-46 187.6 123 75.6
Rhsim04G0123300 Rhododendron simsii HOM05D002560 ORTHO05D003782 6.6e-46 187.6 128 69.5
Nitab4.5_0000047g0010 Nicotiana tabacum HOM05D002560 ORTHO05D003782 8.6e-46 187.2 123 74.8
PGSC0003DMG400017035 Solanum tuberosum HOM05D002560 ORTHO05D003782 1.9e-45 186.0 123 74.0
Atru.chr8.2364 Acer truncatum HOM05D002560 ORTHO05D003782 2.5e-45 185.7 128 68.8
Gohir.D10G118500 Gossypium hirsutum HOM05D002560 ORTHO05D003782 5.6e-45 184.5 128 68.0
Gorai.011G130300 Gossypium raimondii HOM05D002560 ORTHO05D003782 5.6e-45 184.5 128 68.0
Dinv25295 Davidia involucrata HOM05D002560 ORTHO05D003782 9.5e-45 183.7 128 68.8
Gohir.A10G147600 Gossypium hirsutum HOM05D002560 ORTHO05D003782 9.5e-45 183.7 128 68.0
Actinidia20781 Actinidia chinensis HOM05D002560 ORTHO05D003782 1.6e-44 183.0 128 68.0
Dinv35441 Davidia involucrata HOM05D002560 ORTHO05D003782 3.6e-44 181.8 128 66.4
Lj3C943G3 Lonicera japonica HOM05D002560 ORTHO05D003782 4.7e-44 181.4 123 70.7
vmacro08922 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 4.7e-44 181.4 128 68.0
Ciclev10010918m.g Citrus clementina HOM05D002560 ORTHO05D003782 8.0e-44 180.6 128 68.0
COL.COLO4_08633 Corchorus olitorius HOM05D002560 ORTHO05D003782 1.0e-43 180.3 128 68.0
Cpa.g.sc86.8 Carica papaya HOM05D002560 ORTHO05D003782 1.4e-43 179.9 129 67.4
CSS0020454 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 1.8e-43 179.5 128 67.2
DCAR_023988 Daucus carota HOM05D002560 ORTHO05D003782 1.8e-43 179.5 133 63.9
Peaxi162Scf00595g00112 Petunia axillaris HOM05D002560 ORTHO05D003782 2.3e-43 179.1 123 73.2
Prupe.6G288100 Prunus persica HOM05D002560 ORTHO05D003782 8.9e-43 177.2 128 67.2
PGR004G0247 Punica granatum HOM05D002560 ORTHO05D003782 1.2e-42 176.8 123 69.9
RcHm_v2.0_Chr3g0461291 Rosa chinensis HOM05D002560 ORTHO05D003782 1.2e-42 176.8 128 67.2
Cc06_g00590 Coffea canephora HOM05D002560 ORTHO05D003782 1.5e-42 176.4 123 69.1
Duzib151G0314 Durio zibethinus HOM05D002560 ORTHO05D003782 1.5e-42 176.4 128 65.6
TWI53G1929 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 1.5e-42 176.4 123 68.3
MSTRG.5523 Avicennia marina HOM05D002560 ORTHO05D003782 2.0e-42 176.0 123 72.4
Thecc.04G156800 Theobroma cacao HOM05D002560 ORTHO05D003782 2.0e-42 176.0 128 66.4
TWI77G0423 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 2.0e-42 176.0 123 68.3
Duzib268G0573 Durio zibethinus HOM05D002560 ORTHO05D003782 2.6e-42 175.6 128 65.6
Phvul.008G087800 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 2.6e-42 175.6 136 63.2
QL07p033277 Quercus lobata HOM05D002560 ORTHO05D003782 2.6e-42 175.6 128 66.4
Sc20g0006790 Simmondsia chinensis HOM05D002560 ORTHO05D003782 2.6e-42 175.6 128 68.0
Hma1.2p1_0174F.1_g077050 Hydrangea macrophylla HOM05D002560 ORTHO05D003782 3.4e-42 175.3 129 65.9
VMungo1383G3009 Vigna mungo HOM05D002560 ORTHO05D003782 3.4e-42 175.3 123 69.1
Potri.006G106600 Populus trichocarpa HOM05D002560 ORTHO05D003782 5.8e-42 174.5 128 65.6
Actinidia11535 Actinidia chinensis HOM05D002560 ORTHO05D003782 7.5e-42 174.1 123 68.3
FvH4_6g10400 Fragaria vesca HOM05D002560 ORTHO05D003782 7.5e-42 174.1 123 67.5
FAN14G2820 Fragaria x ananassa HOM05D002560 ORTHO05D003782 7.5e-42 174.1 123 67.5
Manes.08G174400 Manihot esculenta HOM05D002560 ORTHO05D003782 7.5e-42 174.1 123 66.7
Glyma.09G278500 Glycine max HOM05D002560 ORTHO05D003782 9.8e-42 173.7 123 68.3
Rhsim05G0228200 Rhododendron simsii HOM05D002560 ORTHO05D003782 9.8e-42 173.7 123 69.9
Oeu057979.2 Olea europaea HOM05D002560 ORTHO05D003782 1.3e-41 173.3 123 69.1
Migut.J00073 Erythranthe guttata HOM05D002560 ORTHO05D003782 1.7e-41 172.9 128 68.0
Glyma.18G210300 Glycine max HOM05D002560 ORTHO05D003782 1.7e-41 172.9 123 67.5
MBI15_g10510_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D003782 1.7e-41 172.9 129 64.3
CiPaw.10G163200 Carya illinoinensis HOM05D002560 ORTHO05D003782 2.2e-41 172.6 128 65.6
Eucgr.K01267 Eucalyptus grandis HOM05D002560 ORTHO05D003782 2.2e-41 172.6 128 63.3
vmacro20346 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 2.2e-41 172.6 123 69.9
GSVIVG01030232001 Vitis vinifera HOM05D002560 ORTHO05D003782 2.2e-41 172.6 131 64.9
Lj1g0007869 Lotus japonicus HOM05D002560 ORTHO05D003782 6.4e-41 171.0 123 67.5
Psat3g122440 Pisum sativum HOM05D002560 ORTHO05D003782 1.1e-40 170.2 123 65.9
SGA_v2.0_scaffold85G26659 Striga asiatica HOM05D002560 ORTHO05D003782 1.1e-40 170.2 123 69.1
FAN05G5301 Fragaria x ananassa HOM05D002560 ORTHO05D003782 1.4e-40 169.9 123 65.9
FAN09G2734 Fragaria x ananassa HOM05D002560 ORTHO05D003782 1.4e-40 169.9 123 65.9
Lsat_1_v5_gn_9_38100 Lactuca sativa HOM05D002560 ORTHO05D003782 1.4e-40 169.9 124 67.7
MD12G1183600 Malus domestica HOM05D002560 ORTHO05D003782 1.4e-40 169.9 128 64.8
DCAR_015351 Daucus carota HOM05D002560 ORTHO05D003782 1.9e-40 169.5 128 66.4
Gohir.A02G005400 Gossypium hirsutum HOM05D002560 ORTHO05D003782 1.9e-40 169.5 128 64.8
SGA_v2.0_scaffold373G50169 Striga asiatica HOM05D002560 ORTHO05D003782 1.9e-40 169.5 123 68.3
Ca_07738_v3 Cicer arietinum L. HOM05D002560 ORTHO05D003782 2.4e-40 169.1 123 65.0
Cfa017080 Carpinus fangiana HOM05D002560 ORTHO05D003782 3.2e-40 168.7 130 63.8
Lj2C63G17 Lonicera japonica HOM05D002560 ORTHO05D003782 3.2e-40 168.7 128 65.6
EL10Ac7g17038 Beta vulgaris HOM05D002560 ORTHO05D003782 4.1e-40 168.3 128 64.8
Nn2g11069 Nelumbo nucifera HOM05D002560 ORTHO05D003782 4.1e-40 168.3 129 63.6
unitig_27.g24878 Utricularia gibba HOM05D002560 ORTHO05D003782 4.1e-40 168.3 123 67.5
AUR62006330 Chenopodium quinoa HOM05D002560 ORTHO05D003782 5.4e-40 167.9 128 64.8
FAN05G0561 Fragaria x ananassa HOM05D002560 ORTHO05D003782 5.4e-40 167.9 123 65.0
Gohir.D02G005900 Gossypium hirsutum HOM05D002560 ORTHO05D003782 5.4e-40 167.9 128 64.1
Gorai.005G006600 Gossypium raimondii HOM05D002560 ORTHO05D003782 5.4e-40 167.9 128 64.1
Potri.016G132000 Populus trichocarpa HOM05D002560 ORTHO05D003782 5.4e-40 167.9 123 66.7
ClCG04G006550 Citrullus lanatus HOM05D002560 ORTHO05D003782 7.0e-40 167.5 123 66.7
Haze_21119 Corylus avellana HOM05D002560 ORTHO05D003782 7.0e-40 167.5 130 62.3
Duzib212G0261 Durio zibethinus HOM05D002560 ORTHO05D003782 7.0e-40 167.5 128 63.3
Manes.09G114600 Manihot esculenta HOM05D002560 ORTHO05D003782 7.0e-40 167.5 123 66.7
CsaV3_4G026950 Cucumis sativus L. HOM05D002560 ORTHO05D003782 9.2e-40 167.2 123 66.7
MD04G1169600 Malus domestica HOM05D002560 ORTHO05D003782 9.2e-40 167.2 128 64.8
CANSAT35G0319 Cannabis sativa HOM05D002560 ORTHO05D003782 1.6e-39 166.4 128 62.5
ECA247G0799 Erigeron canadensis HOM05D002560 ORTHO05D003782 1.6e-39 166.4 124 67.7
FAN02G0292 Fragaria x ananassa HOM05D002560 ORTHO05D003782 2.0e-39 166.0 123 65.0
HanXRQChr15g0463501 Helianthus annuus HOM05D002560 ORTHO05D003782 2.0e-39 166.0 124 67.7
Sed0022812 Sechium edule HOM05D002560 ORTHO05D003782 2.0e-39 166.0 123 66.7
CiPaw.09G217200 Carya illinoinensis HOM05D002560 ORTHO05D003782 2.7e-39 165.6 136 61.8
AUR62026368 Chenopodium quinoa HOM05D002560 ORTHO05D003782 4.6e-39 164.9 128 64.1
Lalb_Chr19g0124111 Lupinus albus HOM05D002560 ORTHO05D003782 4.6e-39 164.9 123 67.5
Actinidia29053 Actinidia chinensis HOM05D002560 ORTHO05D003782 6.0e-39 164.5 123 65.9
TAR369G0139 Trochodendron aralioides HOM05D002560 ORTHO05D003782 6.0e-39 164.5 128 63.3
Haze_21118 Corylus avellana HOM05D002560 ORTHO05D003782 7.8e-39 164.1 130 61.5
Eucgr.K01257 Eucalyptus grandis HOM05D002560 ORTHO05D003782 7.8e-39 164.1 128 60.2
HanXRQChr10g0288601 Helianthus annuus HOM05D002560 ORTHO05D003782 7.8e-39 164.1 124 66.1
Sc02g0000740 Simmondsia chinensis HOM05D002560 ORTHO05D003782 1.3e-38 163.3 128 60.9
Ah.08g209810 Amaranthus hybridus HOM05D002560 ORTHO05D003782 1.7e-38 162.9 128 62.5
arahy.Tifrunner.gnm1.ann1.6VEX49 Arachis hypogaea HOM05D002560 ORTHO05D003782 1.7e-38 162.9 123 66.7
arahy.Tifrunner.gnm1.ann1.TV2NT7 Arachis hypogaea HOM05D002560 ORTHO05D003782 1.7e-38 162.9 123 66.7
Hund19809 Selenicereus undatus HOM05D002560 ORTHO05D003782 1.7e-38 162.9 123 65.9
Aqoxy4G02161 Aquilegia oxysepala HOM05D002560 ORTHO05D003782 2.3e-38 162.5 123 64.2
Medtr7g072330 Medicago truncatula HOM05D002560 ORTHO05D003782 2.3e-38 162.5 123 63.4
Nn2g13307 Nelumbo nucifera HOM05D002560 ORTHO05D003782 3.0e-38 162.2 129 62.0
Hund03758 Selenicereus undatus HOM05D002560 ORTHO05D003782 3.9e-38 161.8 128 63.3
TAR623G1646 Trochodendron aralioides HOM05D002560 ORTHO05D003782 3.9e-38 161.8 129 61.2
Sabra06G0083000 Salix brachista HOM05D002560 ORTHO05D003782 1.1e-37 160.2 128 61.7
TPR.G35291 Trifolium pratense HOM05D002560 ORTHO05D003782 1.1e-37 160.2 123 62.6
HPP92_015583 Vanilla planifolia HOM05D002560 ORTHO05D003782 1.9e-37 159.5 128 60.9
arahy.Tifrunner.gnm1.ann1.D1231E Arachis hypogaea HOM05D002560 ORTHO05D003782 4.3e-37 158.3 123 64.2
ATR0681G310 Amborella trichopoda HOM05D002560 ORTHO05D003782 5.6e-37 157.9 129 59.7
arahy.Tifrunner.gnm1.ann1.PPI0JG Arachis hypogaea HOM05D002560 ORTHO05D003782 5.6e-37 157.9 123 63.4
arahy.Tifrunner.gnm1.ann1.7K02KP Arachis hypogaea HOM05D002560 ORTHO05D003782 7.3e-37 157.5 123 63.4
MSTRG.18962 Avicennia marina HOM05D002560 ORTHO05D003782 1.2e-36 156.8 123 63.4
Phvul.008G088100 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 1.2e-36 156.8 136 58.1
Lalb_Chr01g0023591 Lupinus albus HOM05D002560 ORTHO05D003782 2.1e-36 156.0 125 63.2
PSO017G3901 Papaver somniferum HOM05D002560 ORTHO05D003782 3.6e-36 155.2 124 61.3
PSO170G0779 Papaver somniferum HOM05D002560 ORTHO05D003782 3.6e-36 155.2 124 61.3
Sabra04G0150100 Salix brachista HOM05D002560 ORTHO05D003782 6.2e-36 154.5 128 61.7
THA.LOC104827066 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 8.1e-36 154.1 123 61.8
BcaB04g18570 Brassica carinata HOM05D002560 ORTHO05D003782 1.1e-35 153.7 123 61.0
arahy.Tifrunner.gnm1.ann1.IZK0HU Arachis hypogaea HOM05D002560 ORTHO05D003782 1.8e-35 152.9 126 61.1
BcaC01g04199 Brassica carinata HOM05D002560 ORTHO05D003782 2.3e-35 152.5 123 60.2
A03p36350 Brassica napus HOM05D005896 ORTHO05D007250 2.3e-35 152.5 123 60.2
C03p43970 Brassica napus HOM05D005896 ORTHO05D007250 2.3e-35 152.5 123 60.2
CARHR083160 Cardamine hirsuta HOM05D002560 ORTHO05D003782 3.1e-35 152.1 123 60.2
AUR62029728 Chenopodium quinoa HOM05D002560 ORTHO05D003782 3.1e-35 152.1 128 59.4
AL3G19840 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 6.8e-35 151.0 123 60.2
AT3G08850 Arabidopsis thaliana HOM05D002560 ORTHO05D003782 6.8e-35 151.0 123 60.2
Carub.0003s0796 Capsella rubella HOM05D002560 ORTHO05D003782 6.8e-35 151.0 123 60.2
Os12g0110000 Oryza sativa ssp. japonica HOM05D002560 ORTHO05D003782 6.8e-35 151.0 129 59.7
THA.LOC104816173 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 6.8e-35 151.0 123 61.0
Sp3g07250 Schrenkiella parvula HOM05D002560 ORTHO05D003782 1.5e-34 149.8 123 60.2
THA.LOC104823313 Tarenaya hassleriana HOM05D002560 ORTHO05D003782 1.5e-34 149.8 123 59.3
AUR62006388 Chenopodium quinoa HOM05D002560 ORTHO05D003782 2.0e-34 149.4 128 59.4
Os11g0109933 Oryza sativa ssp. japonica HOM05D002560 ORTHO05D003782 2.0e-34 149.4 129 59.7
Thhalv10019904m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 7.5e-34 147.5 123 60.2
Aa31LG5G18820 Aethionema arabicum HOM05D002560 ORTHO05D003782 1.7e-33 146.4 124 58.9
A05p39970 Brassica napus HOM05D002560 ORTHO05D003782 1.9e-32 142.9 123 58.5
CARHR212130 Cardamine hirsuta HOM05D002560 ORTHO05D003782 1.9e-32 142.9 122 59.8
AL6G10260 Arabidopsis lyrata HOM05D002560 ORTHO05D003782 2.4e-32 142.5 124 59.7
CDE04G1751 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 2.4e-32 142.5 123 58.5
AT5G01770 Arabidopsis thaliana HOM05D002560 ORTHO05D003782 3.2e-32 142.1 124 58.9
BolC3t16666H Brassica oleracea HOM05D002560 ORTHO05D003782 3.2e-32 142.1 136 53.7
BraA03t12804Z Brassica rapa HOM05D002560 ORTHO05D003782 3.2e-32 142.1 136 53.7
Aa31LG1G23430 Aethionema arabicum HOM05D002560 ORTHO05D003782 5.4e-32 141.4 125 58.4
C05p59010 Brassica napus HOM05D002560 ORTHO05D003782 5.4e-32 141.4 123 58.5
Zm00001eb404940 Zea mays HOM05D002560 ORTHO05D003782 5.4e-32 141.4 125 59.2
CDE12G0125 Ceratophyllum demersum HOM05D002560 ORTHO05D003782 9.2e-32 140.6 128 55.5
TPR.G35288 Trifolium pratense HOM05D002560 ORTHO05D003782 9.2e-32 140.6 135 54.8
Thhalv10012449m.g Eutrema salsugineum HOM05D002560 ORTHO05D003782 1.2e-31 140.2 123 56.9
Sp6g41030 Schrenkiella parvula HOM05D002560 ORTHO05D003782 1.2e-31 140.2 123 59.3
BolC5t34554H Brassica oleracea HOM05D002560 ORTHO05D003782 1.6e-31 139.8 123 57.7
Zm00001eb093980 Zea mays HOM05D002560 ORTHO05D003782 1.7e-30 136.3 129 57.4
Zm00001eb195140 Zea mays HOM05D002560 ORTHO05D003782 1.5e-29 133.3 130 56.9
MELO3C000460.2 Cucumis melo HOM05D002560 ORTHO05D003782 7.3e-29 131.0 88 68.2
Pp3c9_4770 Physcomitrium patens HOM05D002560 ORTHO05D003782 1.2e-26 123.6 131 49.6
Pp3c15_3360 Physcomitrium patens HOM05D002560 ORTHO05D003782 2.6e-26 122.5 129 50.4
Pp3c17_3950 Physcomitrium patens HOM05D002560 ORTHO05D003782 5.8e-26 121.3 111 55.0
MBI07_g21055_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022192 9.9e-26 120.6 86 66.3
Pp3c25_7220 Physcomitrium patens HOM05D002560 ORTHO05D003782 4.9e-25 118.2 128 50.8
Mapoly0002s0262 Marchantia polymorpha HOM05D002560 ORTHO05D003782 5.4e-24 114.8 123 50.4
CSS0033860 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 1.6e-23 113.2 123 51.2
SMO334G0080 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 2.7e-23 112.5 121 47.1
SMO116G0458 Selaginella moellendorffii HOM05D002560 ORTHO05D003782 1.1e-19 100.5 122 43.4
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 6.8e-19 97.8 128 42.2
AagrBONN_evm.TU.Sc2ySwM_228.3097 Anthoceros agrestis HOM05D002560 ORTHO05D003782 1.2e-18 97.1 124 42.7
PRCOL_00002325 Prasinoderma coloniale HOM05D002560 ORTHO05D003782 2.6e-18 95.9 101 48.5
MCO07G246 Micromonas commoda HOM05D002560 ORTHO05D003782 3.4e-18 95.5 101 46.5
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 4.4e-18 95.1 128 41.4
CBR_g54867 Chara braunii HOM05D002560 ORTHO05D003782 8.4e-17 90.9 131 40.5
BcaC05g29622 Brassica carinata HOM05D002560 ORTHO05D003782 8.7e-14 80.9 122 39.3
MBI06_g28673_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022192 1.1e-13 80.5 77 55.8
Cre08.g371957 Chlamydomonas reinhardtii HOM05D002560 ORTHO05D003782 1.6e-12 76.6 104 42.3
Actinidia32554 Actinidia chinensis HOM05D002560 ORTHO05D003782 4.8e-12 75.1 68 51.5
Haze_26280 Corylus avellana HOM05D002560 ORTHO05D003782 1.1e-08 63.9 118 32.2
Cfa024140 Carpinus fangiana HOM05D002560 ORTHO05D003782 7.1e-08 61.2 119 34.5


User provided reference genes

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