Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 1.4e-104 382.9 185 100.0
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.4e-14 84.0 185 36.8
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 1.8e-14 83.6 61 72.1
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 4.0e-14 82.4 185 36.8
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 8.8e-14 81.3 185 36.2
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 5.4e-11 72.0 185 32.4
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.0e-11 71.6 47 76.6
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 4.5e-10 68.9 51 70.6
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 7.7e-10 68.2 51 72.5
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.3e-09 67.4 47 70.2
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 1.3e-09 67.4 47 70.2
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 2.3e-09 66.6 51 68.6
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.3e-09 66.6 46 65.2
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.3e-09 66.6 50 66.0
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 3.8e-09 65.9 49 69.4
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 3.8e-09 65.9 47 68.1
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.8e-09 65.9 179 31.3
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 3.8e-09 65.9 47 68.1
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 5.0e-09 65.5 51 66.7
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 8.6e-09 64.7 47 68.1
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 8.6e-09 64.7 179 30.7
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.5e-08 63.9 51 64.7
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 1.9e-08 63.5 46 63.0
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.9e-08 63.5 46 63.0
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 3.2e-08 62.8 44 68.2
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 4.2e-08 62.4 45 66.7
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 5.5e-08 62.0 47 66.0
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.2e-07 60.8 45 64.4
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 1.6e-07 60.5 185 28.6
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 2.8e-07 59.7 47 59.6
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 3.6e-07 59.3 41 70.7
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 4.7e-07 58.9 185 29.7
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.0e-07 58.2 42 61.9
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.0e-07 58.2 42 61.9
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 8.0e-07 58.2 47 61.7
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 8.0e-07 58.2 51 52.9
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.0e-06 57.8 48 62.5
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 1.0e-06 57.8 44 65.9
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.4e-06 57.4 44 63.6
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 1.4e-06 57.4 47 63.8
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 1.8e-06 57.0 47 57.4
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.3e-06 56.6 41 61.0
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 2.3e-06 56.6 42 61.9
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 3.0e-06 56.2 46 63.0
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 3.0e-06 56.2 47 61.7
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 3.0e-06 56.2 42 59.5
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 5.2e-06 55.5 45 60.0
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 5.2e-06 55.5 46 60.9
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 5.2e-06 55.5 46 58.7
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 5.2e-06 55.5 44 63.6
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 6.8e-06 55.1 48 60.4
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 6.8e-06 55.1 44 63.6
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 6.8e-06 55.1 42 64.3
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 8.8e-06 54.7 47 53.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 8.8e-06 54.7 47 57.4
Dinv03021 Davidia involucrata HOM05D007530 ORTHO05D009556 8.8e-06 54.7 28 82.1
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 8.8e-06 54.7 47 59.6
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 8.8e-06 54.7 53 56.6
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 8.8e-06 54.7 41 61.0
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 8.8e-06 54.7 47 57.4


User provided reference genes

Program Settings