Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 4.6e-255 884.0 437 100.0
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 3.1e-211 738.4 443 82.2
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 7.5e-205 717.2 440 80.7
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 6.8e-198 694.1 429 79.5
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 1.4e-187 659.8 433 76.2
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 9.5e-184 647.1 433 77.8
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 1.5e-165 586.6 446 64.6
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 4.4e-165 585.1 441 63.0
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 5.6e-160 568.2 444 61.7
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.6e-159 566.6 441 63.0
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 3.1e-158 562.4 443 63.0
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 7.6e-157 557.8 446 63.0
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 9.9e-157 557.4 442 63.1
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 6.4e-156 554.7 442 61.8
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 6.4e-156 554.7 441 60.3
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 1.9e-155 553.1 442 61.3
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.9e-155 553.1 442 60.2
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 1.0e-153 547.4 441 60.8
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 2.3e-153 546.2 441 60.5
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 3.0e-153 545.8 441 62.4
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 3.0e-153 545.8 437 61.6
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 3.9e-153 545.4 442 62.0
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 6.7e-153 544.7 434 62.0
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 4.3e-152 542.0 450 59.1
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 5.6e-152 541.6 440 59.5
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 5.6e-152 541.6 443 59.4
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 5.6e-152 541.6 438 60.0
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 9.6e-152 540.8 443 58.9
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.8e-151 539.3 443 58.9
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 3.7e-151 538.9 439 59.2
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.8e-150 536.6 448 60.7
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.8e-150 536.6 470 58.9
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 1.2e-149 533.9 421 61.5
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 1.5e-149 533.5 366 65.6
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 2.6e-149 532.7 438 59.1
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 5.8e-149 531.6 443 60.0
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 5.8e-149 531.6 431 60.8
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 1.0e-148 530.8 447 58.8
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 1.0e-148 530.8 440 59.5
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 8.4e-148 527.7 443 57.3
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 1.4e-147 526.9 441 58.5
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.9e-147 526.6 439 58.3
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 2.5e-147 526.2 445 60.0
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 2.5e-147 526.2 438 58.7
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 3.2e-147 525.8 452 58.2
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.2e-147 525.4 429 59.2
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 4.2e-147 525.4 441 59.4
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 9.3e-147 524.2 366 65.8
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.2e-146 523.9 439 58.8
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 3.5e-146 522.3 354 66.9
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 4.6e-146 521.9 366 65.6
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.0e-146 521.5 434 58.5
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 6.0e-146 521.5 440 56.8
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 1.8e-145 520.0 428 58.6
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.3e-145 519.6 406 61.1
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 2.3e-145 519.6 435 59.1
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 3.0e-145 519.2 391 61.9
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 3.9e-145 518.8 444 57.2
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 6.7e-145 518.1 430 58.8
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-144 517.3 411 60.1
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.5e-144 516.9 443 56.0
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 3.3e-144 515.8 441 57.4
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 7.4e-144 514.6 417 57.8
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 3.7e-143 512.3 442 56.6
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 3.7e-143 512.3 471 54.6
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 1.1e-142 510.8 441 55.8
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 1.1e-142 510.8 442 58.1
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 1.4e-142 510.4 409 57.9
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 3.1e-142 509.2 437 56.8
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 6.9e-142 508.1 442 55.9
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 2.6e-141 506.1 442 55.0
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 2.6e-141 506.1 426 59.2
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 2.6e-141 506.1 439 57.9
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.7e-140 503.4 456 56.4
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 1.7e-140 503.4 390 62.6
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 1.1e-139 500.7 439 58.5
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 2.5e-139 499.6 425 56.7
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 1.6e-138 496.9 321 71.0
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.6e-138 496.9 395 60.3
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 2.1e-138 496.5 433 55.4
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 3.5e-138 495.7 434 55.1
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 3.5e-138 495.7 485 52.4
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 1.0e-137 494.2 433 55.2
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.5e-136 490.3 433 55.0
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 9.7e-136 487.6 533 49.3
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.3e-135 487.3 433 55.4
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 1.6e-135 486.9 433 54.3
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 6.3e-135 485.0 387 59.4
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.8e-134 483.4 347 65.7
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 3.2e-131 472.6 443 55.3
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 8.8e-129 464.5 321 67.0
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 1.1e-126 457.6 388 56.4
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 4.1e-126 455.7 439 55.4
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 7.9e-122 441.4 388 54.9
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 2.2e-111 406.8 354 56.2
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 2.2e-111 406.8 434 55.8
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 4.7e-98 362.5 402 45.3
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 8.0e-98 361.7 253 64.8
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 9.8e-96 354.8 331 51.4
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 2.3e-89 333.6 340 50.0
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 3.7e-87 326.2 289 56.1
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 8.3e-87 325.1 410 43.4
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 8.6e-84 315.1 336 47.9
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.9e-83 313.9 333 48.0
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 2.0e-72 277.3 404 37.6
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 4.0e-65 253.1 238 53.8
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 1.2e-61 241.5 375 34.7
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 1.9e-54 217.6 182 57.7
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 1.6e-53 214.5 119 85.7
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 1.4e-41 174.9 131 61.1
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 4.9e-31 139.8 136 52.9
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 9.7e-19 99.0 50 86.0
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 2.1e-13 81.3 59 61.0
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 5.5e-06 56.6 52 50.0


User provided reference genes

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