Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 3.7e-255 884.4 455 100.0
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 2.8e-194 682.2 484 77.9
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.9e-143 512.7 389 67.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 6.5e-143 511.5 429 62.5
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.4e-140 503.8 407 63.1
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 6.7e-140 501.5 427 62.3
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 2.0e-139 500.0 392 65.3
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.6e-139 499.6 436 60.1
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 6.3e-138 495.0 360 66.1
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 8.2e-138 494.6 447 58.8
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.1e-137 492.7 414 63.3
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 2.6e-136 489.6 402 62.9
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.8e-135 485.7 403 62.8
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.0e-135 485.3 386 64.0
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 6.5e-135 485.0 378 65.3
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.1e-134 484.2 442 58.6
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.2e-134 482.6 427 60.7
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 9.4e-134 481.1 383 64.2
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-133 480.7 410 61.0
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 1.6e-133 480.3 430 60.5
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.7e-133 478.8 358 66.8
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.0e-132 477.6 491 55.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 1.8e-132 476.9 402 60.7
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 8.8e-132 474.6 330 71.5
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 1.1e-129 467.6 352 66.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 2.4e-129 466.5 433 57.5
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 3.1e-129 466.1 411 60.6
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 4.1e-129 465.7 378 65.9
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 4.1e-129 465.7 454 55.9
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.3e-129 465.3 405 60.5
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 9.1e-129 464.5 431 57.3
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.2e-128 464.2 418 60.5
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 4.5e-128 462.2 379 61.7
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.9e-128 461.8 418 60.0
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 1.7e-127 460.3 363 63.9
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 2.9e-127 459.5 444 56.1
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.9e-127 459.5 400 60.5
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.0e-127 458.8 344 68.3
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.1e-126 457.6 370 63.5
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.1e-126 457.6 361 65.1
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 1.5e-126 457.2 355 63.4
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 4.2e-126 455.7 379 61.7
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 7.2e-126 454.9 421 56.5
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 4.7e-125 452.2 362 60.5
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 1.4e-124 450.7 422 58.5
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 4.0e-124 449.1 423 55.8
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 5.2e-124 448.7 355 64.5
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 6.8e-124 448.4 365 62.5
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 1.2e-123 447.6 422 57.3
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 1.5e-123 447.2 451 54.1
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 2.0e-123 446.8 428 54.2
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 3.4e-123 446.0 426 56.3
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 4.4e-123 445.7 358 64.2
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.7e-123 445.3 451 53.2
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 5.7e-123 445.3 317 74.4
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 7.5e-123 444.9 431 56.8
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.8e-122 443.0 346 73.7
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.7e-122 442.6 386 60.1
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 4.1e-121 439.1 447 53.0
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 5.4e-121 438.7 363 59.5
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 9.1e-121 438.0 343 64.1
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 9.1e-121 438.0 411 54.5
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 9.1e-121 438.0 323 68.4
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 1.6e-120 437.2 409 57.2
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 4.5e-120 435.6 410 57.8
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 2.9e-119 433.0 341 65.1
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 2.9e-119 433.0 421 56.1
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 3.8e-119 432.6 443 51.7
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 6.5e-119 431.8 355 58.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 8.6e-119 431.4 425 54.8
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 1.1e-118 431.0 351 64.7
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.5e-118 430.6 341 61.9
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.2e-118 429.1 349 63.9
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.1e-117 425.2 358 62.3
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 1.4e-116 424.1 363 57.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 1.8e-116 423.7 317 66.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 2.3e-116 423.3 305 66.6
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.3e-116 423.3 451 51.4
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 4.0e-116 422.5 382 59.2
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.0e-116 422.5 391 56.3
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-115 420.2 365 60.3
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 2.6e-115 419.9 381 58.0
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.4e-113 413.3 416 53.1
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 2.7e-112 409.8 368 58.7
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 3.5e-112 409.5 345 56.5
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.5e-112 409.1 329 64.7
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 3.8e-111 406.0 411 55.2
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 6.6e-111 405.2 364 55.2
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 9.8e-107 391.3 257 70.8
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 7.8e-104 381.7 406 51.7
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 7.8e-104 381.7 294 62.6
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.7e-103 380.6 326 62.0
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.3e-103 380.2 326 62.0
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.8e-101 373.2 327 59.3
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.8e-101 373.2 339 56.0
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 2.6e-99 366.7 494 45.5
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 4.7e-93 345.9 365 52.9
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.8e-82 309.7 381 49.9
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.4e-81 307.0 330 52.7
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 3.3e-78 296.6 243 62.6
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.6e-71 272.3 295 45.8
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 3.3e-70 270.0 210 63.8
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.3e-68 262.7 278 52.9
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 6.9e-68 262.3 333 46.8
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 5.8e-67 259.2 282 50.4
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 3.0e-63 246.9 216 56.0
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 7.6e-59 232.3 192 61.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 2.2e-58 230.7 242 53.7
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.1e-57 225.7 155 69.7
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 4.3e-54 216.5 182 53.8
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.0e-51 207.6 290 41.7
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.8e-51 206.1 244 45.5
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 1.4e-44 184.9 203 48.8
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.6e-43 180.6 106 87.7
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.0e-39 168.7 195 51.8
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 5.1e-39 166.4 103 81.6
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.2e-37 161.0 186 49.5
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 1.2e-35 155.2 194 44.8
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 1.1e-33 148.7 111 64.0
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 2.8e-29 134.0 198 42.9
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 2.6e-27 127.5 98 64.3
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 7.7e-27 125.9 263 34.2
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 6.5e-26 122.9 226 36.3
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 8.5e-26 122.5 77 74.0
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 1.4e-25 121.7 86 64.0
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 8.0e-24 115.9 144 44.4
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 8.0e-24 115.9 193 37.8
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 4.8e-21 106.7 78 69.2
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 4.8e-21 106.7 140 42.9
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.1e-20 105.5 306 27.8
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 3.1e-20 104.0 109 54.1
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 2.6e-19 100.9 63 73.0
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 3.5e-19 100.5 223 34.1
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 1.9e-17 94.7 175 33.1
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.9e-17 94.7 306 26.8
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 2.1e-16 91.3 98 53.1
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 5.2e-15 86.7 271 26.2
SMO118G0092 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 1.7e-13 81.6 306 26.1
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 2.8e-13 80.9 292 25.0
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 8.3e-13 79.3 69 58.0
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 4.5e-11 73.6 252 29.4
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.3e-10 72.0 243 28.0
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 2.2e-10 71.2 269 25.7
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 1.1e-09 68.9 58 51.7


User provided reference genes

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