Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 6.8e-90 334.0 166 100.0
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 3.9e-61 238.4 131 93.1
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 1.2e-54 216.9 131 83.2
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 1.6e-54 216.5 131 83.2
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.0e-53 213.8 131 83.2
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 3.9e-53 211.8 131 82.4
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 3.9e-53 211.8 131 82.4
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 1.1e-50 203.8 160 69.4
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 3.3e-44 182.2 131 67.9
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 1.3e-43 180.3 131 68.7
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 2.8e-43 179.1 131 67.9
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 3.1e-42 175.6 131 66.4
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 5.3e-42 174.9 134 64.9
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 5.3e-42 174.9 136 61.8
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 2.6e-41 172.6 131 64.1
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.4e-41 172.2 134 64.9
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 7.6e-41 171.0 134 63.4
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 1.3e-40 170.2 131 64.9
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 2.2e-40 169.5 125 66.4
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 2.2e-40 169.5 131 65.6
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 3.8e-40 168.7 138 58.7
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 8.4e-40 167.5 134 61.9
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 1.4e-39 166.8 131 64.1
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 1.9e-39 166.4 134 63.4
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 2.4e-39 166.0 138 57.2
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 3.2e-39 165.6 130 61.5
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 4.2e-39 165.2 130 61.5
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 1.2e-38 163.7 138 57.2
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 2.1e-38 162.9 130 59.2
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 2.7e-38 162.5 131 62.6
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 2.7e-38 162.5 126 64.3
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 4.6e-38 161.8 134 59.7
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 4.6e-38 161.8 131 61.1
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 7.9e-38 161.0 129 65.1
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 1.8e-37 159.8 130 63.1
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 3.0e-37 159.1 134 58.2
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 5.1e-37 158.3 128 62.5
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 8.7e-37 157.5 134 57.5
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.5e-36 156.0 134 59.7
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 3.3e-36 155.6 131 59.5
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 5.6e-36 154.8 134 57.5
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 5.6e-36 154.8 131 60.3
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 7.4e-36 154.5 134 56.0
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 1.6e-35 153.3 131 57.3
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 2.1e-35 152.9 134 56.7
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 2.1e-35 152.9 131 58.0
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 2.8e-35 152.5 128 57.0
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 2.8e-35 152.5 134 56.0
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.7e-35 152.1 134 56.7
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.7e-35 152.1 134 56.7
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 3.7e-35 152.1 134 56.7
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 6.2e-35 151.4 134 57.5
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 8.1e-35 151.0 139 56.8
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 8.1e-35 151.0 134 56.0
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 8.1e-35 151.0 128 59.4
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 1.1e-34 150.6 134 53.7
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 1.4e-34 150.2 131 57.3
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 1.4e-34 150.2 124 62.1
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 1.4e-34 150.2 131 55.7
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 2.4e-34 149.4 139 54.0
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 2.4e-34 149.4 126 57.1
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 3.1e-34 149.1 134 55.2
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 3.1e-34 149.1 134 53.7
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 5.3e-34 148.3 131 55.0
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 5.3e-34 148.3 131 55.0
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 6.9e-34 147.9 134 52.2
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 6.9e-34 147.9 134 56.7
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 1.5e-33 146.7 131 57.3
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 2.0e-33 146.4 131 53.4
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.6e-33 146.0 138 55.8
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 3.4e-33 145.6 134 55.2
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 7.6e-33 144.4 134 53.0
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 7.6e-33 144.4 135 51.9
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.7e-32 143.3 135 54.8
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 2.2e-32 142.9 157 50.3
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 3.8e-32 142.1 131 51.9
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 3.8e-32 142.1 128 54.7
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-31 140.6 138 49.3
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 1.4e-31 140.2 135 54.1
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 1.4e-31 140.2 161 49.7
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 1.9e-31 139.8 132 55.3
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 2.5e-31 139.4 135 54.1
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 4.2e-31 138.7 128 53.1
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 4.2e-31 138.7 128 51.6
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 4.2e-31 138.7 134 53.0
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 5.5e-31 138.3 128 51.6
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 5.5e-31 138.3 131 55.0
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 5.5e-31 138.3 134 52.2
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 7.1e-31 137.9 128 52.3
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 9.3e-31 137.5 122 57.4
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 3.5e-30 135.6 128 51.6
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 3.5e-30 135.6 130 51.5
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 4.6e-30 135.2 131 55.7
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 4.6e-30 135.2 128 50.0
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 4.6e-30 135.2 138 50.0
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 4.6e-30 135.2 127 52.0
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 4.6e-30 135.2 133 53.4
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 6.0e-30 134.8 161 49.1
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 6.0e-30 134.8 161 49.1
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 7.9e-30 134.4 131 53.4
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 7.9e-30 134.4 131 53.4
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 1.0e-29 134.0 131 53.4
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.0e-29 134.0 131 53.4
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 1.3e-29 133.7 100 65.0
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 1.3e-29 133.7 128 50.0
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 6.7e-29 131.3 130 48.5
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 6.7e-29 131.3 130 48.5
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 6.7e-29 131.3 130 48.5
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 8.7e-29 131.0 128 49.2
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 1.5e-28 130.2 130 48.5
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.5e-28 130.2 130 48.5
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 1.9e-28 129.8 155 46.5
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 3.3e-28 129.0 131 51.9
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 7.4e-28 127.9 128 49.2
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 9.6e-28 127.5 116 56.0
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.8e-27 125.9 149 47.7
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 2.8e-27 125.9 130 49.2
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 1.4e-26 123.6 213 38.0
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 1.8e-26 123.2 101 59.4
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 1.8e-26 123.2 103 67.0
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 4.0e-26 122.1 142 46.5
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 4.0e-26 122.1 97 61.9
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 1.5e-25 120.2 127 48.0
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 3.8e-24 115.5 162 43.2
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.2e-22 110.5 127 48.0
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 2.7e-22 109.4 98 53.1
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 5.7e-20 101.7 125 47.2
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 1.3e-19 100.5 124 46.8
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 1.6e-19 100.1 75 68.0
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 6.3e-19 98.2 125 46.4
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 8.2e-19 97.8 134 41.8
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 8.2e-19 97.8 141 40.4
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 8.2e-19 97.8 158 38.6
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 2.2e-16 89.7 124 43.5
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 1.1e-15 87.4 124 42.7
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 2.1e-14 83.2 124 43.5
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 6.1e-14 81.6 124 41.1
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 3.9e-13 79.0 88 45.5
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.3e-11 73.9 82 46.3


User provided reference genes

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