Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 3.4e-115 418.3 207 100.0
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 3.0e-63 245.7 207 65.2
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 1.4e-60 236.9 207 63.3
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 1.6e-59 233.4 207 61.8
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 1.6e-59 233.4 207 61.8
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 1.6e-59 233.4 207 61.8
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.7e-58 229.9 207 61.4
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 2.2e-58 229.6 207 60.9
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 2.7e-56 222.6 207 57.5
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 4.7e-56 221.9 207 58.5
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 8.0e-56 221.1 207 57.5
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 1.2e-54 217.2 207 58.0
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 4.4e-54 215.3 207 58.5
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 7.5e-54 214.5 207 56.5
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 7.5e-54 214.5 207 58.5
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 9.8e-54 214.2 207 57.0
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 9.8e-54 214.2 207 57.0
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 2.2e-53 213.0 207 58.5
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 2.8e-53 212.6 207 56.5
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 3.1e-52 209.1 207 54.1
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 4.1e-52 208.8 207 53.6
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 7.0e-52 208.0 207 55.6
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 7.0e-52 208.0 207 55.6
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 1.2e-51 207.2 207 54.1
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 1.2e-51 207.2 207 54.1
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.6e-51 206.8 207 54.6
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.6e-51 206.8 207 57.0
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 2.0e-51 206.5 206 54.9
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 2.0e-51 206.5 207 55.1
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 2.0e-51 206.5 207 55.1
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 2.7e-51 206.1 207 53.1
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 2.7e-51 206.1 207 55.6
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 3.5e-51 205.7 227 52.0
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 7.7e-51 204.5 207 53.1
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 7.7e-51 204.5 207 54.1
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 1.3e-50 203.8 210 56.2
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 1.3e-50 203.8 207 56.0
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 1.3e-50 203.8 207 53.1
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 1.3e-50 203.8 207 53.1
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 3.8e-50 202.2 207 55.6
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 5.0e-50 201.8 198 55.6
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 1.9e-49 199.9 206 54.9
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 2.5e-49 199.5 207 54.6
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 2.5e-49 199.5 207 51.2
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 4.2e-49 198.7 207 54.1
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 4.2e-49 198.7 207 52.7
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 5.5e-49 198.4 205 53.2
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 5.5e-49 198.4 246 50.0
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 9.5e-49 197.6 207 50.7
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 9.5e-49 197.6 207 54.6
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 2.1e-48 196.4 205 51.7
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 2.8e-48 196.1 207 54.1
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 3.6e-48 195.7 205 52.2
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 4.7e-48 195.3 207 53.6
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 8.0e-48 194.5 207 51.7
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.0e-47 194.1 207 52.7
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 1.4e-47 193.7 207 50.2
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 1.4e-47 193.7 207 50.2
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.8e-47 193.4 207 52.7
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 2.3e-47 193.0 207 51.2
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 2.3e-47 193.0 207 51.2
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 3.0e-47 192.6 207 52.7
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 4.0e-47 192.2 207 50.7
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 5.2e-47 191.8 207 51.7
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 1.5e-46 190.3 207 51.2
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 2.0e-46 189.9 207 52.7
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 3.4e-46 189.1 207 50.2
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 3.4e-46 189.1 207 50.2
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 3.4e-46 189.1 207 48.3
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 4.4e-46 188.7 205 53.2
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 4.4e-46 188.7 205 53.2
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 9.8e-46 187.6 207 52.2
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 9.8e-46 187.6 205 52.7
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 9.8e-46 187.6 205 52.7
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 1.7e-45 186.8 207 51.7
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 1.7e-45 186.8 207 50.2
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 3.7e-45 185.7 207 50.2
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 4.9e-45 185.3 207 50.2
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 6.3e-45 184.9 120 77.5
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 8.3e-45 184.5 207 48.8
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 2.4e-44 183.0 207 49.3
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 3.1e-44 182.6 207 48.8
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 3.1e-44 182.6 205 51.2
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 5.4e-44 181.8 205 49.3
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 7.0e-44 181.4 207 49.8
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 7.0e-44 181.4 229 48.0
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 3.5e-43 179.1 207 49.3
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 5.9e-43 178.3 207 47.8
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 1.0e-42 177.6 207 48.3
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 1.0e-42 177.6 207 46.4
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 1.0e-42 177.6 207 47.8
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 1.3e-42 177.2 207 47.3
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 1.3e-42 177.2 207 46.4
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 3.8e-42 175.6 121 71.9
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 8.6e-42 174.5 207 44.9
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 1.1e-41 174.1 119 73.1
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 2.5e-41 172.9 207 48.8
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 8.0e-40 167.9 202 46.0
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 1.2e-38 164.1 207 47.3
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 2.0e-38 163.3 205 45.4
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.6e-35 153.7 201 46.3
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 6.0e-35 151.8 105 74.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.3e-34 150.6 214 43.0
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 1.7e-34 150.2 205 43.9
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 3.3e-33 146.0 205 42.0
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 9.5e-33 144.4 205 42.9
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 4.7e-32 142.1 205 42.4
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 4.7e-32 142.1 207 44.0
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 6.2e-32 141.7 205 41.0
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 1.4e-31 140.6 205 41.5
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 1.8e-31 140.2 198 42.9
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 6.8e-31 138.3 203 42.4
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 1.2e-30 137.5 205 41.5
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 2.0e-30 136.7 194 43.3
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 5.8e-30 135.2 194 42.8
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 5.8e-30 135.2 194 42.8
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 5.8e-30 135.2 194 42.8
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 9.8e-30 134.4 194 42.8
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.7e-29 132.5 188 43.6
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.7e-29 132.5 188 43.6
RcHm_v2.0_Chr6g0271051 Rosa chinensis HOM05D005262 ORTHO05D006590 4.9e-29 132.1 207 43.5
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 9.2e-28 127.9 194 41.8
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 2.5e-25 119.8 194 39.2
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 3.3e-25 119.4 200 40.5
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 8.3e-21 104.8 66 77.3
ClCG08G001930 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-19 100.5 85 63.5
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 1.0e-18 97.8 102 56.9
RcHm_v2.0_Chr7g0220341 Rosa chinensis HOM05D005262 ORTHO05D006590 1.2e-14 84.3 59 67.8
SEGI_29332 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.4e-14 82.8 67 59.7
Glyma.11G251200 Glycine max HOM05D005262 ORTHO05D006590 1.7e-13 80.5 121 40.5
Pp3c14_7320 Physcomitrium patens HOM05D005262 ORTHO05D006590 4.2e-12 75.9 197 28.9
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 1.6e-11 73.9 54 66.7
SHI20784 Sapria himalayana HOM05D005262 ORTHO05D006590 1.6e-11 73.9 90 46.7
SEGI_36558 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 1.0e-10 71.2 53 64.2
SEGI_23137 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 2.3e-10 70.1 52 65.4
Mapoly0001s0053 Marchantia polymorpha HOM05D005262 ORTHO05D006590 3.0e-10 69.7 165 29.7
SEGI_39727 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 3.0e-10 69.7 53 62.3
AagrBONN_evm.TU.Sc2ySwM_228.1458 Anthoceros agrestis HOM05D005262 ORTHO05D006590 1.1e-09 67.8 197 27.9
RcHm_v2.0_Chr7g0220351 Rosa chinensis HOM05D005262 ORTHO05D006590 4.7e-08 62.4 35 80.0
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 8.1e-08 61.6 112 32.1
FAN15G0396 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.1e-07 61.2 59 55.9


User provided reference genes

Program Settings