Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 1.1e-59 233.0 115 100.0
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 9.6e-51 203.4 115 87.8
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 1.8e-49 199.1 113 85.8
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 2.0e-48 195.7 114 85.1
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 8.1e-42 173.7 119 80.7
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.6e-40 168.7 124 75.0
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 3.4e-32 141.7 132 60.6
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 4.5e-32 141.4 121 66.9
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 1.0e-31 140.2 120 62.5
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 1.7e-31 139.4 111 64.9
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 2.5e-30 135.6 138 55.1
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 2.5e-30 135.6 121 59.5
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 2.5e-30 135.6 98 69.4
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 4.2e-30 134.8 128 57.0
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 4.2e-30 134.8 128 56.2
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 4.2e-30 134.8 118 61.0
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 4.2e-30 134.8 104 66.3
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 5.5e-30 134.4 75 86.7
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 7.1e-30 134.0 118 59.3
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 7.1e-30 134.0 93 71.0
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 7.1e-30 134.0 118 61.0
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 7.1e-30 134.0 133 55.6
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 9.3e-30 133.7 90 70.0
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 1.2e-29 133.3 76 78.9
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 1.2e-29 133.3 130 55.4
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 1.2e-29 133.3 84 73.8
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 2.1e-29 132.5 118 60.2
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 2.1e-29 132.5 118 60.2
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.1e-29 132.5 125 59.2
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.1e-29 132.5 98 69.4
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.7e-29 132.1 128 54.7
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 3.5e-29 131.7 127 56.7
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 6.0e-29 131.0 117 59.8
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 6.0e-29 131.0 76 82.9
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 6.0e-29 131.0 104 65.4
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 6.0e-29 131.0 130 59.2
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 6.0e-29 131.0 112 60.7
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 6.0e-29 131.0 81 75.3
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 7.9e-29 130.6 78 78.2
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 7.9e-29 130.6 117 59.8
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 7.9e-29 130.6 109 59.6
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 7.9e-29 130.6 128 54.7
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 1.0e-28 130.2 117 58.1
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 1.0e-28 130.2 118 60.2
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 1.0e-28 130.2 109 58.7
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 1.0e-28 130.2 128 57.0
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 1.0e-28 130.2 129 59.7
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 1.0e-28 130.2 115 62.6
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 1.8e-28 129.4 115 62.6
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 1.8e-28 129.4 115 62.6
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 2.3e-28 129.0 124 58.1
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 3.0e-28 128.6 117 58.1
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 3.0e-28 128.6 117 58.1
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.9e-28 128.3 126 57.1
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.9e-28 128.3 126 57.1
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 3.9e-28 128.3 77 77.9
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 3.9e-28 128.3 126 58.7
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 5.1e-28 127.9 109 58.7
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 5.1e-28 127.9 126 57.1
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 6.7e-28 127.5 70 85.7
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 6.7e-28 127.5 77 77.9
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 8.7e-28 127.1 118 58.5
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 8.7e-28 127.1 76 78.9
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 8.7e-28 127.1 74 78.4
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 1.1e-27 126.7 123 56.9
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.1e-27 126.7 72 80.6
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 1.5e-27 126.3 73 78.1
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 1.5e-27 126.3 118 58.5
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 1.5e-27 126.3 73 78.1
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 1.5e-27 126.3 72 77.8
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 1.5e-27 126.3 118 55.9
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 2.5e-27 125.6 74 79.7
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 2.5e-27 125.6 124 58.1
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 3.3e-27 125.2 117 55.6
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 3.3e-27 125.2 98 64.3
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 7.4e-27 124.0 128 54.7
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 9.6e-27 123.6 95 66.3
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 9.6e-27 123.6 112 60.7
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 1.6e-26 122.9 124 54.8
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 2.1e-26 122.5 87 67.8
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 2.8e-26 122.1 76 69.7
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 3.7e-26 121.7 70 80.0
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 6.3e-26 120.9 104 61.5
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 1.1e-25 120.2 86 65.1
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 1.1e-25 120.2 86 65.1
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.4e-25 119.8 127 54.3
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 6.9e-25 117.5 77 71.4
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 9.0e-25 117.1 88 59.1
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.5e-24 116.3 92 63.0
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 2.0e-24 115.9 102 59.8
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 3.4e-24 115.2 104 55.8
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 5.0e-23 111.3 155 47.1
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 6.5e-23 110.9 92 59.8
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 1.4e-22 109.8 74 64.9
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 5.5e-22 107.8 74 63.5
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.0e-20 102.1 73 56.2
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 6.7e-20 100.9 112 49.1
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 8.7e-20 100.5 68 67.6
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 1.1e-19 100.1 81 53.1
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.5e-19 99.0 111 51.4
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 3.3e-19 98.6 55 80.0
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 4.3e-19 98.2 63 71.4
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 6.3e-18 94.4 69 55.1
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 6.9e-17 90.9 70 51.4
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 2.0e-16 89.4 64 59.4
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.5e-11 72.4 119 45.4
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 1.7e-10 69.7 82 51.2
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 3.1e-09 65.5 81 50.6
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 5.3e-09 64.7 39 71.8
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 2.2e-07 59.3 40 67.5
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 4.2e-06 55.1 32 78.1


User provided reference genes

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