Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G226.31 Capsicum annuum HOM05D003911 ORTHO05D002175 6.8e-44 180.3 90 100.0
CAN.G43.13 Capsicum annuum HOM05D003911 ORTHO05D002175 4.0e-20 101.3 62 79.0
CAN.G229.21 Capsicum annuum HOM05D000310 ORTHO05D000509 2.0e-19 99.0 62 79.0
CAN.G760.2 Capsicum annuum HOM05D000399 ORTHO05D018858 2.0e-19 99.0 66 75.8
PGSC0003DMG401004219 Solanum tuberosum HOM05D003911 ORTHO05D002175 8.4e-18 93.6 64 65.6
PGSC0003DMG400020615 Solanum tuberosum HOM05D000995 ORTHO05D001773 2.4e-17 92.0 62 72.6
Nitab4.5_0000205g0130 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-17 90.5 85 52.9
Nitab4.5_0000051g0150 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-16 89.7 84 52.4
Nitab4.5_0003551g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.1e-16 89.0 84 52.4
Nitab4.5_0003139g0120 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-16 88.6 84 53.6
Nitab4.5_0014328g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.7e-16 88.6 88 51.1
Nitab4.5_0001361g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.5e-16 88.2 84 52.4
Nitab4.5_0008086g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.8e-16 87.0 84 50.0
Nitab4.5_0000989g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.3e-15 85.5 84 51.2
Nitab4.5_0000378g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.0e-15 85.1 76 56.6
Nitab4.5_0000639g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-15 84.7 87 49.4
Nitab4.5_0001204g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.9e-15 84.7 82 51.2
Nitab4.5_0003598g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.1e-15 84.3 79 53.2
Nitab4.5_0000002g0380 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-15 84.0 84 48.8
Nitab4.5_0001168g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-15 84.0 84 48.8
Nitab4.5_0012205g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.6e-15 84.0 84 51.2
Nitab4.5_0009406g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-15 83.6 84 48.8
Nitab4.5_0001077g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-14 83.2 87 51.7
Nitab4.5_0008324g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-14 83.2 88 48.9
Nitab4.5_0013863g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.1e-14 83.2 84 51.2
Nitab4.5_0000002g0570 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-14 82.8 88 46.6
Nitab4.5_0002690g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-14 82.4 84 50.0
Nitab4.5_0009292g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.9e-14 82.4 83 48.2
Nitab4.5_0002897g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.5e-14 82.0 84 48.8
Nitab4.5_0000005g0430 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-14 81.3 84 46.4
Nitab4.5_0000919g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-14 81.3 84 51.2
Nitab4.5_0001772g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-14 81.3 84 47.6
Nitab4.5_0001800g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-14 81.3 84 50.0
Nitab4.5_0006161g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-14 81.3 84 50.0
Nitab4.5_0000043g0350 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-14 80.5 84 48.8
Nitab4.5_0001502g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 9.6e-14 80.1 78 51.3
CAN.G264.19 Capsicum annuum HOM05D003911 ORTHO05D002175 1.2e-13 79.7 82 48.8
Nitab4.5_0000022g0170 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 79.7 87 49.4
Nitab4.5_0003185g0060 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 79.7 79 50.6
Nitab4.5_0004708g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 79.7 82 51.2
Nitab4.5_0013726g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-13 79.7 84 50.0
Nitab4.5_0004332g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-13 77.8 87 44.8
Nitab4.5_0007148g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.7e-13 77.8 84 50.0
Nitab4.5_0000262g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-13 77.4 82 50.0
Nitab4.5_0000319g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-13 77.4 84 48.8
Nitab4.5_0003019g0020 Nicotiana tabacum HOM05D003911 ORTHO05D012628 6.2e-13 77.4 80 48.8
Nitab4.5_0003811g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-13 77.4 87 48.3
Nitab4.5_0010853g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.2e-13 77.4 87 47.1
CAN.G126.50 Capsicum annuum HOM05D003911 ORTHO05D002175 8.1e-13 77.0 88 43.2
Nitab4.5_0000003g0310 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.1e-13 77.0 87 48.3
Nitab4.5_0003040g0150 Nicotiana tabacum HOM05D003911 ORTHO05D012628 8.1e-13 77.0 87 47.1
Sopen09g011440 Solanum pennellii HOM05D003911 ORTHO05D002175 1.1e-12 76.6 86 45.3
Nitab4.5_0002700g0210 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.4e-12 76.3 77 49.4
Nitab4.5_0000476g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.4e-12 75.5 83 44.6
Nitab4.5_0001194g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.1e-12 75.1 87 46.0
Nitab4.5_0000913g0110 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.0e-12 74.7 86 45.3
Nitab4.5_0002393g0080 Nicotiana tabacum HOM05D003911 ORTHO05D002175 5.3e-12 74.3 86 46.5
Nitab4.5_0000297g0230 Nicotiana tabacum HOM05D003911 ORTHO05D012628 9.0e-12 73.6 87 44.8
Nitab4.5_0000448g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.2e-11 73.2 84 45.2
CAN.G146.8 Capsicum annuum HOM05D003911 ORTHO05D002175 5.8e-11 70.9 84 46.4
CAN.G267.2 Capsicum annuum HOM05D003911 ORTHO05D002175 9.9e-11 70.1 84 41.7
Nitab4.5_0000059g0140 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-10 69.7 80 48.8
Nitab4.5_0005121g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.3e-10 69.7 78 47.4
Nitab4.5_0004570g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.7e-10 69.3 87 44.8
PGSC0003DMG400008626 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.7e-10 69.3 89 43.8
Nitab4.5_0001953g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 2.2e-10 68.9 74 50.0
CAN.G1364.7 Capsicum annuum HOM05D000163 ORTHO05D000219 3.8e-10 68.2 78 42.3
Nitab4.5_0000142g0450 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.8e-10 68.2 84 45.2
Nitab4.5_0000517g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-10 67.0 65 52.3
Nitab4.5_0006058g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.4e-10 67.0 60 58.3
PGSC0003DMG400018974 Solanum tuberosum HOM05D000995 ORTHO05D001773 1.1e-09 66.6 85 43.5
PGSC0003DMG400023952 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.4e-09 66.2 85 43.5
CAN.G1050.1 Capsicum annuum HOM05D003911 ORTHO05D002175 2.4e-09 65.5 63 50.8
Nitab4.5_0000347g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-09 64.7 73 47.9
Nitab4.5_0000702g0040 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.2e-09 64.7 59 57.6
Solyc05g150133.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 4.2e-09 64.7 89 39.3
Sopen02g001430 Solanum pennellii HOM05D003574 ORTHO05D002175 4.2e-09 64.7 85 42.4
Solyc10g055685.1 Solanum lycopersicum HOM05D003574 ORTHO05D002175 5.4e-09 64.3 89 40.4
Nitab4.5_0000702g0030 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.1e-09 63.9 63 55.6
Sopen03g014810 Solanum pennellii HOM05D003574 ORTHO05D002175 1.2e-08 63.2 85 41.2
Sopen05g008570 Solanum pennellii HOM05D003574 ORTHO05D002175 1.6e-08 62.8 85 41.2
Nitab4.5_0001643g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-08 62.4 89 36.0
Nitab4.5_0002884g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.1e-08 62.4 89 36.0
Nitab4.5_0000004g0030 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 61.6 89 36.0
Nitab4.5_0000161g0080 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 61.6 89 34.8
Nitab4.5_0000716g0110 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 61.6 85 37.6
Nitab4.5_0000806g0170 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.5e-08 61.6 85 37.6
Nitab4.5_0000015g0090 Nicotiana tabacum HOM05D003574 ORTHO05D002175 4.6e-08 61.2 89 36.0
Nitab4.5_0004222g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.6e-08 61.2 60 53.3
vmacro23270 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 4.6e-08 61.2 89 33.7
Nitab4.5_0000394g0070 Nicotiana tabacum HOM05D003911 ORTHO05D002175 6.0e-08 60.8 50 62.0
Nitab4.5_0001868g0020 Nicotiana tabacum HOM05D003574 ORTHO05D002175 6.0e-08 60.8 89 36.0
PGSC0003DMG400043966 Solanum tuberosum HOM05D000995 ORTHO05D001773 6.0e-08 60.8 45 62.2
Nitab4.5_0009621g0010 Nicotiana tabacum HOM05D003574 ORTHO05D002175 7.8e-08 60.5 89 34.8
Nitab4.5_0022150g0020 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.7e-07 59.3 89 34.8
Nitab4.5_0001924g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-07 58.9 89 34.8
Nitab4.5_0002755g0120 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.3e-07 58.9 85 35.3
Actinidia27557 Actinidia chinensis HOM05D021049 ORTHO05D001773 3.0e-07 58.5 81 35.8
Nitab4.5_0000154g0180 Nicotiana tabacum HOM05D003574 ORTHO05D002175 3.0e-07 58.5 89 34.8
Solyc05g043390.2 Solanum lycopersicum HOM05D003911 ORTHO05D002175 3.0e-07 58.5 48 60.4
Nitab4.5_0000417g0050 Nicotiana tabacum HOM05D003574 ORTHO05D002175 5.1e-07 57.8 89 37.1
Nitab4.5_0000442g0120 Nicotiana tabacum HOM05D003574 ORTHO05D012628 5.1e-07 57.8 89 34.8
Nitab4.5_0000736g0040 Nicotiana tabacum HOM05D003574 ORTHO05D002175 8.7e-07 57.0 88 33.0
Nitab4.5_0002735g0010 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-07 57.0 42 64.3
Nitab4.5_0022442g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 8.7e-07 57.0 84 40.5
Sopen05g013400 Solanum pennellii HOM05D000424 ORTHO05D000355 8.7e-07 57.0 81 40.7
PGSC0003DMG400045633 Solanum tuberosum HOM05D003574 ORTHO05D002175 1.1e-06 56.6 77 41.6
Nitab4.5_0000857g0080 Nicotiana tabacum HOM05D003574 ORTHO05D012628 1.5e-06 56.2 88 35.2
Nitab4.5_0005092g0050 Nicotiana tabacum HOM05D003911 ORTHO05D002175 1.5e-06 56.2 55 49.1
Rhsim07G0168400 Rhododendron simsii HOM05D000995 ORTHO05D002175 1.5e-06 56.2 76 38.2
CAN.G138.18 Capsicum annuum HOM05D003911 ORTHO05D002175 1.9e-06 55.8 67 38.8
Nitab4.5_0001384g0140 Nicotiana tabacum HOM05D003574 ORTHO05D002175 2.5e-06 55.5 89 36.0
Rhsim02G0146600 Rhododendron simsii HOM05D000995 ORTHO05D001773 2.5e-06 55.5 76 38.2
Nitab4.5_0000014g0360 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-06 55.1 51 54.9
Nitab4.5_0001106g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 3.3e-06 55.1 46 58.7
Nitab4.5_0002999g0020 Nicotiana tabacum HOM05D003911 ORTHO05D002175 4.3e-06 54.7 48 56.2
Nitab4.5_0000513g0090 Nicotiana tabacum HOM05D003911 ORTHO05D002175 7.3e-06 53.9 34 70.6


User provided reference genes

Program Settings