Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G225.19 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-43 179.5 106 100.0
CAN.G309.130 Capsicum annuum HOM05D002496 ORTHO05D002787 1.7e-33 146.0 105 69.5
CAN.G1833.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.4e-32 142.1 105 83.8
CAN.G1579.7 Capsicum annuum HOM05D002496 ORTHO05D002787 2.0e-31 139.0 105 82.9
CAN.G1751.12 Capsicum annuum HOM05D002496 ORTHO05D002787 2.0e-31 139.0 105 82.9
CAN.G309.126 Capsicum annuum HOM05D002496 ORTHO05D002787 1.7e-30 136.0 105 77.1
CAN.G2119.2 Capsicum annuum HOM05D002496 ORTHO05D002787 5.0e-30 134.4 105 76.2
CAN.G575.112 Capsicum annuum HOM05D002496 ORTHO05D002787 8.6e-30 133.7 105 81.0
CAN.G1703.18 Capsicum annuum HOM05D002496 ORTHO05D002787 2.5e-29 132.1 105 80.0
CAN.G2119.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.5e-29 132.1 105 80.0
CAN.G2177.2 Capsicum annuum HOM05D002496 ORTHO05D002787 1.6e-28 129.4 105 64.8
CAN.G1703.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.8e-28 128.6 105 78.1
Solyc12g100360.1 Solanum lycopersicum HOM05D002496 ORTHO05D002787 2.8e-28 128.6 105 78.1
Sopen12g035030 Solanum pennellii HOM05D002496 ORTHO05D002787 2.8e-28 128.6 105 78.1
CAN.G575.132 Capsicum annuum HOM05D002496 ORTHO05D002787 3.6e-28 128.3 105 65.7
Peaxi162Scf00738g00312 Petunia axillaris HOM05D002496 ORTHO05D002787 3.6e-28 128.3 105 78.1
CAN.G2026.1 Capsicum annuum HOM05D002496 ORTHO05D002787 2.3e-27 125.6 105 76.2
CAN.G309.135 Capsicum annuum HOM05D002496 ORTHO05D002787 2.3e-27 125.6 103 63.1
Nitab4.5_0000827g0130 Nicotiana tabacum HOM05D002496 ORTHO05D002787 2.3e-27 125.6 105 74.3
CAN.G309.124 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-26 122.1 105 77.1
CAN.G309.109 Capsicum annuum HOM05D002048 ORTHO05D002146 6.4e-25 117.5 105 72.4
CAN.G134.141 Capsicum annuum HOM05D002518 ORTHO05D002630 1.1e-24 116.7 94 80.9
CAN.G134.139 Capsicum annuum HOM05D002496 ORTHO05D002787 2.4e-24 115.5 105 70.5
CAN.G1353.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.2e-23 113.2 91 63.7
CAN.G309.113 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-23 111.7 96 76.0
CAN.G1353.19 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-22 109.8 105 71.4
FAN16G0954 Fragaria x ananassa HOM05D002496 ORTHO05D002787 8.6e-22 107.1 106 67.9
QL01p003675 Quercus lobata HOM05D002496 ORTHO05D002787 2.5e-21 105.5 106 67.0
Migut.D02566 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.3e-21 105.1 106 66.0
Migut.D02589 Erythranthe guttata HOM05D002496 ORTHO05D002787 3.3e-21 105.1 106 66.0
FvH4_3g45741 Fragaria vesca HOM05D002496 ORTHO05D002787 3.3e-21 105.1 106 67.0
FAN25G0679 Fragaria x ananassa HOM05D002496 ORTHO05D002787 3.3e-21 105.1 106 67.0
Oeu023700.1 Olea europaea HOM05D002496 ORTHO05D002787 4.3e-21 104.8 106 64.2
Oeu023952.2 Olea europaea HOM05D002496 ORTHO05D002787 9.5e-21 103.6 106 62.3
Prupe.6G003300 Prunus persica HOM05D002496 ORTHO05D002787 9.5e-21 103.6 106 66.0
Eucgr.J01766 Eucalyptus grandis HOM05D002496 ORTHO05D002787 1.2e-20 103.2 103 54.4
CAN.G309.144 Capsicum annuum HOM05D002496 ORTHO05D002146 1.6e-20 102.8 89 74.2
MD03G1003600 Malus domestica HOM05D002496 ORTHO05D002787 1.6e-20 102.8 106 64.2
MD11G1003500 Malus domestica HOM05D002496 ORTHO05D002787 2.8e-20 102.1 106 66.0
RcHm_v2.0_Chr5g0083811 Rosa chinensis HOM05D002496 ORTHO05D002787 2.8e-20 102.1 106 66.0
CANSAT11G2110 Cannabis sativa HOM05D002496 ORTHO05D002787 3.6e-20 101.7 106 66.0
CiPaw.13G177100 Carya illinoinensis HOM05D002496 ORTHO05D002787 3.6e-20 101.7 106 65.1
Sp1g41030 Schrenkiella parvula HOM05D002496 ORTHO05D002787 3.6e-20 101.7 106 65.1
CAN.G2314.3 Capsicum annuum HOM05D002496 ORTHO05D002787 4.7e-20 101.3 90 56.7
Carub.0001s4386 Capsella rubella HOM05D002496 ORTHO05D002787 1.1e-19 100.1 106 64.2
AT1G55350 Arabidopsis thaliana HOM05D002496 ORTHO05D002787 1.4e-19 99.8 106 65.1
Thhalv10011175m.g Eutrema salsugineum HOM05D002496 ORTHO05D002787 1.4e-19 99.8 106 65.1
CAN.G1669.7 Capsicum annuum HOM05D002496 ORTHO05D002787 1.8e-19 99.4 90 55.6
Cpa.g.sc119.40 Carica papaya HOM05D002496 ORTHO05D002787 1.8e-19 99.4 106 58.5
CAN.G309.146 Capsicum annuum HOM05D002496 ORTHO05D002787 2.3e-19 99.0 90 77.8
SGA_v2.0_scaffold3G01729 Striga asiatica HOM05D002496 ORTHO05D002787 2.3e-19 99.0 106 62.3
Atru.chr3.2106 Acer truncatum HOM05D002496 ORTHO05D002787 3.1e-19 98.6 106 64.2
Haze_22941 Corylus avellana HOM05D002496 ORTHO05D002787 3.1e-19 98.6 106 62.3
Manes.03G087600 Manihot esculenta HOM05D002496 ORTHO05D002787 3.1e-19 98.6 106 64.2
vmacro12599 Vaccinium macrocarpon HOM05D002496 ORTHO05D002787 3.1e-19 98.6 106 62.3
Aa31LG10G1150 Aethionema arabicum HOM05D002496 ORTHO05D002787 4.0e-19 98.2 105 62.9
CSS0046180 Camellia sinensis var. sinensis HOM05D002496 ORTHO05D002787 4.0e-19 98.2 106 63.2
CARHR045010 Cardamine hirsuta HOM05D002496 ORTHO05D002787 4.0e-19 98.2 106 61.3
CiPaw.14G137000 Carya illinoinensis HOM05D002496 ORTHO05D002787 4.0e-19 98.2 105 64.8
AL1G63400 Arabidopsis lyrata HOM05D002496 ORTHO05D002787 5.2e-19 97.8 106 63.2
A06p00230 Brassica napus HOM05D002496 ORTHO05D002787 5.2e-19 97.8 106 61.3
BolC6t36109H Brassica oleracea HOM05D002496 ORTHO05D002787 5.2e-19 97.8 106 61.3
BraA06t23239Z Brassica rapa HOM05D002496 ORTHO05D002787 5.2e-19 97.8 106 61.3
HanXRQChr13g0405751 Helianthus annuus HOM05D002496 ORTHO05D002787 5.2e-19 97.8 107 64.5
Potri.003G221100 Populus trichocarpa HOM05D002496 ORTHO05D002787 5.2e-19 97.8 106 64.2
C06p10330 Brassica napus HOM05D002496 ORTHO05D002787 6.8e-19 97.4 106 54.7
Rhsim01G0184300 Rhododendron simsii HOM05D002496 ORTHO05D002787 6.8e-19 97.4 106 61.3
CAN.G1579.14 Capsicum annuum HOM05D002496 ORTHO05D002787 8.9e-19 97.1 81 82.7
Cfa009562 Carpinus fangiana HOM05D002496 ORTHO05D002787 8.9e-19 97.1 106 61.3
PGR119G1355 Punica granatum HOM05D002496 ORTHO05D002787 8.9e-19 97.1 105 63.8
BcaB04g16962 Brassica carinata HOM05D002496 ORTHO05D002787 1.2e-18 96.7 106 63.2
Cc01_g00070 Coffea canephora HOM05D002496 ORTHO05D002787 1.2e-18 96.7 106 59.4
Actinidia39346 Actinidia chinensis HOM05D002496 ORTHO05D002787 1.5e-18 96.3 106 61.3
DCAR_029934 Daucus carota HOM05D002496 ORTHO05D002787 1.5e-18 96.3 106 63.2
Glyma.05G167200 Glycine max HOM05D002496 ORTHO05D002787 1.5e-18 96.3 107 48.6
THA.LOC104822681 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 2.0e-18 95.9 106 61.3
Lsat_1_v5_gn_6_53141 Lactuca sativa HOM05D002496 ORTHO05D002787 2.6e-18 95.5 107 63.6
Sabra03G0164600 Salix brachista HOM05D002496 ORTHO05D002787 2.6e-18 95.5 106 63.2
TAR623G0218 Trochodendron aralioides HOM05D002496 ORTHO05D002787 5.8e-18 94.4 106 64.2
Lj2A763T47 Lonicera japonica HOM05D002496 ORTHO05D002787 7.5e-18 94.0 106 59.4
Aqoxy1G00475 Aquilegia oxysepala HOM05D002496 ORTHO05D002787 1.3e-17 93.2 104 59.6
HanXRQChr02g0057261 Helianthus annuus HOM05D002496 ORTHO05D002787 1.3e-17 93.2 106 62.3
THA.LOC104810325 Tarenaya hassleriana HOM05D002496 ORTHO05D002787 1.3e-17 93.2 106 61.3
CAN.G1579.1 Capsicum annuum HOM05D002496 ORTHO05D002787 2.2e-17 92.4 88 52.3
ECA233G0145 Erigeron canadensis HOM05D002496 ORTHO05D002787 2.2e-17 92.4 106 62.3
CAN.G1353.23 Capsicum annuum HOM05D002496 ORTHO05D002787 2.9e-17 92.0 90 53.3
Potri.001G003900 Populus trichocarpa HOM05D002496 ORTHO05D002787 2.9e-17 92.0 106 50.0
SalBow2G0058 Salvia bowleyana HOM05D002496 ORTHO05D002787 2.9e-17 92.0 106 60.4
CAN.G1579.4 Capsicum annuum HOM05D002496 ORTHO05D002787 4.9e-17 91.3 90 53.3
Dinv13473 Davidia involucrata HOM05D002496 ORTHO05D002787 4.9e-17 91.3 106 59.4
Sabra01G0002600 Salix brachista HOM05D002496 ORTHO05D002787 4.9e-17 91.3 106 56.6
MSTRG.20937 Avicennia marina HOM05D002496 ORTHO05D002787 6.4e-17 90.9 106 61.3
CAN.G134.148 Capsicum annuum HOM05D002048 ORTHO05D002146 8.3e-17 90.5 78 80.8
CAN.G309.121 Capsicum annuum HOM05D002496 ORTHO05D002787 8.3e-17 90.5 55 72.7
MBI01_g25638_MAGBIO Magnolia biondii HOM05D002496 ORTHO05D002787 8.3e-17 90.5 106 60.4
Gohir.A03G022300 Gossypium hirsutum HOM05D002496 ORTHO05D002787 1.1e-16 90.1 106 59.4
Gohir.D03G146400 Gossypium hirsutum HOM05D002496 ORTHO05D002787 1.1e-16 90.1 106 59.4
Gorai.003G153800 Gossypium raimondii HOM05D002496 ORTHO05D002787 1.1e-16 90.1 106 59.4
Nn7g35861 Nelumbo nucifera HOM05D002496 ORTHO05D002787 1.1e-16 90.1 106 61.3
Thecc.09G199700 Theobroma cacao HOM05D002496 ORTHO05D002787 1.9e-16 89.4 106 59.4
EL10Ac4g10386 Beta vulgaris HOM05D002496 ORTHO05D002787 2.4e-16 89.0 106 59.4
Ciclev10014012m.g Citrus clementina HOM05D002496 ORTHO05D002787 5.4e-16 87.8 106 61.3
Duzib168G0200 Durio zibethinus HOM05D002496 ORTHO05D002787 7.1e-16 87.4 106 59.4
TAR369G0007 Trochodendron aralioides HOM05D002496 ORTHO05D002787 7.1e-16 87.4 106 60.4
CAN.G743.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.6e-15 86.3 94 68.1
GSVIVG01025470001 Vitis vinifera HOM05D002496 ORTHO05D002787 2.1e-15 85.9 106 60.4
Actinidia30436 Actinidia chinensis HOM05D002496 ORTHO05D002787 1.7e-14 82.8 94 61.7
AUR62040902 Chenopodium quinoa HOM05D002496 ORTHO05D002787 1.7e-14 82.8 106 58.5
unitig_899.g15353 Utricularia gibba HOM05D002496 ORTHO05D002787 2.3e-14 82.4 92 59.8
CAN.G1353.9 Capsicum annuum HOM05D002048 ORTHO05D002146 3.0e-14 82.0 79 53.2
CAN.G309.128 Capsicum annuum HOM05D002496 ORTHO05D002146 3.9e-14 81.6 54 70.4
CAN.G1353.21 Capsicum annuum HOM05D002048 ORTHO05D002146 6.6e-14 80.9 54 70.4
Sc16g0012220 Simmondsia chinensis HOM05D002496 ORTHO05D002787 1.5e-13 79.7 106 58.5
CDE02G0627 Ceratophyllum demersum HOM05D002496 ORTHO05D002787 1.9e-13 79.3 106 56.6
Glyma.08G125500 Glycine max HOM05D002496 ORTHO05D002787 2.5e-13 79.0 107 55.1
ATR0827G153 Amborella trichopoda HOM05D002496 ORTHO05D002787 1.8e-11 72.8 106 52.8
TPR.G6803 Trifolium pratense HOM05D002496 ORTHO05D002787 1.8e-11 72.8 57 59.6
Lalb_Chr13g0295581 Lupinus albus HOM05D002496 ORTHO05D002787 3.1e-11 72.0 57 57.9
Psat7g064160 Pisum sativum HOM05D002496 ORTHO05D002787 3.1e-11 72.0 57 59.6
ClCG03G014540 Citrullus lanatus HOM05D002496 ORTHO05D002787 4.0e-11 71.6 106 55.7
Medtr8g088520 Medicago truncatula HOM05D002496 ORTHO05D002787 4.0e-11 71.6 57 57.9
PSO339G0705 Papaver somniferum HOM05D002496 ORTHO05D002787 4.0e-11 71.6 105 57.1
PSO384G1583 Papaver somniferum HOM05D002496 ORTHO05D002787 4.0e-11 71.6 105 57.1
SEGI_17528 Sequoiadendron giganteum HOM05D002496 ORTHO05D002787 4.0e-11 71.6 106 52.8
VMungo0251G3571 Vigna mungo HOM05D002496 ORTHO05D002787 4.0e-11 71.6 107 51.4
arahy.Tifrunner.gnm1.ann1.3G7H7K Arachis hypogaea HOM05D002496 ORTHO05D002787 5.2e-11 71.2 57 56.1
arahy.Tifrunner.gnm1.ann1.P751E4 Arachis hypogaea HOM05D002496 ORTHO05D002787 5.2e-11 71.2 57 56.1
CAN.G134.157 Capsicum annuum HOM05D002496 ORTHO05D002787 5.2e-11 71.2 70 78.6
AUR62019163 Chenopodium quinoa HOM05D002496 ORTHO05D002787 5.2e-11 71.2 106 54.7
MELO3C015577.2 Cucumis melo HOM05D002496 ORTHO05D002787 5.2e-11 71.2 106 55.7
CsaV3_1G041650 Cucumis sativus L. HOM05D002496 ORTHO05D002787 5.2e-11 71.2 106 55.7
Phvul.002G247600 Phaseolus vulgaris HOM05D002496 ORTHO05D002787 1.2e-10 70.1 57 54.4
Sed0022657 Sechium edule HOM05D002496 ORTHO05D002787 1.2e-10 70.1 106 53.8
Hund21627 Selenicereus undatus HOM05D002496 ORTHO05D002787 1.5e-10 69.7 109 52.3
Ca_17842_v3 Cicer arietinum L. HOM05D002496 ORTHO05D002787 4.4e-10 68.2 58 55.2
Lj4g0028195 Lotus japonicus HOM05D002496 ORTHO05D002787 4.4e-10 68.2 107 52.3
Sed0000966 Sechium edule HOM05D002496 ORTHO05D002787 4.4e-10 68.2 106 53.8
Os02g0709400 Oryza sativa ssp. japonica HOM05D002496 ORTHO05D002787 4.9e-09 64.7 104 39.4
HPP92_024699 Vanilla planifolia HOM05D002496 ORTHO05D002787 1.9e-08 62.8 104 49.0
CAN.G309.107 Capsicum annuum HOM05D002496 ORTHO05D002787 2.4e-08 62.4 83 63.9
AagrBONN_evm.TU.Sc2ySwM_344.939 Anthoceros agrestis HOM05D002496 ORTHO05D002787 6.0e-07 57.8 94 30.9
CAN.G134.146 Capsicum annuum HOM05D002518 ORTHO05D002630 6.0e-07 57.8 31 83.9
Zm00001eb014030 Zea mays HOM05D002496 ORTHO05D002787 1.7e-06 56.2 117 33.3
CAN.G309.103 Capsicum annuum HOM05D002496 ORTHO05D002787 5.1e-06 54.7 31 80.6


User provided reference genes

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