Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G225.16 Capsicum annuum HOM05D001135 ORTHO05D001005 8.9e-90 333.6 167 100.0
CAN.G865.10 Capsicum annuum HOM05D001135 ORTHO05D001005 1.6e-30 136.7 139 55.4
Solyc03g117680.4 Solanum lycopersicum HOM05D001135 ORTHO05D001005 8.2e-27 124.4 139 51.1
Nitab4.5_0004738g0080 Nicotiana tabacum HOM05D001135 ORTHO05D001005 2.6e-25 119.4 139 51.1
Nitab4.5_0002700g0030 Nicotiana tabacum HOM05D001135 ORTHO05D001005 7.7e-25 117.9 139 50.4
Sopen03g036590 Solanum pennellii HOM05D001135 ORTHO05D001005 1.7e-24 116.7 139 48.9
PGSC0003DMG400014214 Solanum tuberosum HOM05D001135 ORTHO05D001005 9.4e-23 110.9 137 48.9
Peaxi162Scf00314g01029 Petunia axillaris HOM05D001135 ORTHO05D001005 3.7e-19 99.0 141 48.9
Peaxi162Scf00207g00338 Petunia axillaris HOM05D001135 ORTHO05D001005 3.5e-17 92.4 145 43.4
Nitab4.5_0000886g0090 Nicotiana tabacum HOM05D001135 ORTHO05D001005 1.0e-16 90.9 145 44.8
Nitab4.5_0007797g0010 Nicotiana tabacum HOM05D001135 ORTHO05D001005 3.2e-15 85.9 145 42.8
Cc04_g05310 Coffea canephora HOM05D001135 ORTHO05D001005 4.2e-15 85.5 141 42.6
Hma1.2p1_0329F.1_g127300 Hydrangea macrophylla HOM05D001135 ORTHO05D001005 1.8e-13 80.1 129 41.9
CAN.G1598.6 Capsicum annuum HOM05D001135 ORTHO05D001005 3.0e-13 79.3 145 40.0
CSS0026809 Camellia sinensis var. sinensis HOM05D001135 ORTHO05D001005 1.2e-12 77.4 133 41.4
Dinv23268 Davidia involucrata HOM05D001135 ORTHO05D001005 1.5e-12 77.0 145 36.6
Hma1.2p1_1914F.1_g307400 Hydrangea macrophylla HOM05D001135 ORTHO05D001005 4.4e-12 75.5 118 43.2
Rhsim12G0185300 Rhododendron simsii HOM05D001135 ORTHO05D001005 5.7e-12 75.1 137 35.8
PGSC0003DMG400028923 Solanum tuberosum HOM05D001135 ORTHO05D001005 5.7e-12 75.1 145 38.6
Cc04_g13280 Coffea canephora HOM05D001135 ORTHO05D001005 7.5e-12 74.7 92 48.9
Solyc06g068540.3 Solanum lycopersicum HOM05D001135 ORTHO05D001005 1.1e-10 70.9 145 37.2
Rhsim08G0203000 Rhododendron simsii HOM05D001135 ORTHO05D001005 3.1e-10 69.3 145 37.2
Sopen06g025800 Solanum pennellii HOM05D001135 ORTHO05D001005 3.1e-10 69.3 145 37.2
Lj9C491T6 Lonicera japonica HOM05D001135 ORTHO05D001005 5.3e-10 68.6 132 37.1
CSS0028633 Camellia sinensis var. sinensis HOM05D001135 ORTHO05D001005 1.6e-09 67.0 144 36.1
vmacro16841 Vaccinium macrocarpon HOM05D001135 ORTHO05D001005 2.0e-09 66.6 136 36.8
Migut.D01144 Erythranthe guttata HOM05D001135 ORTHO05D001005 4.5e-09 65.5 114 38.6
Oeu035064.1 Olea europaea HOM05D001135 ORTHO05D001005 4.5e-09 65.5 73 50.7
SalBow1G6428 Salvia bowleyana HOM05D001135 ORTHO05D001005 4.5e-09 65.5 73 47.9
vmacro19073 Vaccinium macrocarpon HOM05D001135 ORTHO05D001005 4.5e-09 65.5 145 35.9
MSTRG.4669 Avicennia marina HOM05D001135 ORTHO05D001005 7.7e-09 64.7 52 59.6
DCAR_021375 Daucus carota HOM05D001135 ORTHO05D001005 1.0e-08 64.3 145 35.2
Dinv21427 Davidia involucrata HOM05D001135 ORTHO05D001005 2.9e-08 62.8 78 42.3
CsaV3_3G032660 Cucumis sativus L. HOM05D001135 ORTHO05D001005 5.0e-08 62.0 122 35.2
Sed0014764 Sechium edule HOM05D001135 ORTHO05D001005 5.0e-08 62.0 92 41.3
MELO3C024885.2 Cucumis melo HOM05D001135 ORTHO05D001005 6.5e-08 61.6 120 35.0
MSTRG.11220 Avicennia marina HOM05D001135 ORTHO05D001005 1.1e-07 60.8 43 65.1
Oeu043863.1 Olea europaea HOM05D001135 ORTHO05D001005 1.1e-07 60.8 78 43.6
CDE02G0672 Ceratophyllum demersum HOM05D001135 ORTHO05D001005 1.9e-07 60.1 70 45.7
Lsat_1_v5_gn_4_85040 Lactuca sativa HOM05D001135 ORTHO05D001005 1.9e-07 60.1 120 40.8
unitig_52.g17021 Utricularia gibba HOM05D001135 ORTHO05D001005 1.9e-07 60.1 118 38.1
DCAR_016317 Daucus carota HOM05D001135 ORTHO05D001005 2.5e-07 59.7 136 34.6
Duzib150G1425 Durio zibethinus HOM05D001135 ORTHO05D001005 2.5e-07 59.7 60 48.3
Thecc.09G154000 Theobroma cacao HOM05D001135 ORTHO05D001005 2.5e-07 59.7 91 40.7
Migut.I00627 Erythranthe guttata HOM05D001135 ORTHO05D001005 3.2e-07 59.3 58 55.2
Thecc.06G046700 Theobroma cacao HOM05D001135 ORTHO05D001005 3.2e-07 59.3 47 57.4
MSTRG.9394 Avicennia marina HOM05D001135 ORTHO05D001005 4.2e-07 58.9 47 59.6
ClCG10G012820 Citrullus lanatus HOM05D001135 ORTHO05D001005 4.2e-07 58.9 66 45.5
MBI15_g08405_MAGBIO Magnolia biondii HOM05D001135 ORTHO05D001005 4.2e-07 58.9 47 55.3
CDE04G1307 Ceratophyllum demersum HOM05D001135 ORTHO05D001005 7.2e-07 58.2 46 58.7
SGA_v2.0_scaffold74G24594 Striga asiatica HOM05D001135 ORTHO05D001005 7.2e-07 58.2 101 38.6
arahy.Tifrunner.gnm1.ann1.JM6T1X Arachis hypogaea HOM05D001135 ORTHO05D001005 9.4e-07 57.8 56 51.8
arahy.Tifrunner.gnm1.ann1.MX1ZBV Arachis hypogaea HOM05D001135 ORTHO05D001005 9.4e-07 57.8 56 51.8
COL.COLO4_26778 Corchorus olitorius HOM05D001135 ORTHO05D001005 9.4e-07 57.8 65 50.8
HanXRQChr16g0499451 Helianthus annuus HOM05D001135 ORTHO05D001005 9.4e-07 57.8 123 35.8
Potri.018G102800 Populus trichocarpa HOM05D001135 ORTHO05D001005 1.2e-06 57.4 49 53.1
HPP92_020614 Vanilla planifolia HOM05D001135 ORTHO05D001005 1.2e-06 57.4 81 39.5
GSVIVG01016101001 Vitis vinifera HOM05D001135 ORTHO05D001005 1.2e-06 57.4 37 73.0
Manes.11G069400 Manihot esculenta HOM05D001135 ORTHO05D001005 2.1e-06 56.6 47 59.6
Nn8g40088 Nelumbo nucifera HOM05D001135 ORTHO05D001005 2.1e-06 56.6 63 52.4
PSO063G4052 Papaver somniferum HOM05D001135 ORTHO05D001005 2.7e-06 56.2 71 45.1
PSO782G2293 Papaver somniferum HOM05D001135 ORTHO05D001005 2.7e-06 56.2 71 45.1
Duzib235G0183 Durio zibethinus HOM05D001135 ORTHO05D001005 3.6e-06 55.8 59 45.8
Gohir.D10G000600 Gossypium hirsutum HOM05D001135 ORTHO05D001005 3.6e-06 55.8 68 41.2
Gorai.011G001000 Gossypium raimondii HOM05D001135 ORTHO05D001005 3.6e-06 55.8 68 41.2
Nn8g40080 Nelumbo nucifera HOM05D001135 ORTHO05D001005 3.6e-06 55.8 63 50.8
Cpa.g.sc199.18 Carica papaya HOM05D001135 ORTHO05D001005 4.7e-06 55.5 80 41.2
ECA232G0265 Erigeron canadensis HOM05D001135 ORTHO05D002177 4.7e-06 55.5 79 43.0
Medtr4g130310 Medicago truncatula HOM05D001135 ORTHO05D001005 4.7e-06 55.5 48 47.9
Lalb_Chr12g0198831 Lupinus albus HOM05D001135 ORTHO05D001005 6.1e-06 55.1 55 45.5
Oeu023307.2 Olea europaea HOM05D001135 ORTHO05D001005 6.1e-06 55.1 84 41.7
Sed0015225 Sechium edule HOM05D001135 ORTHO05D001005 6.1e-06 55.1 72 45.8
DCAR_025540 Daucus carota HOM05D001135 ORTHO05D001005 8.0e-06 54.7 39 64.1
SHI02834 Sapria himalayana HOM05D001135 ORTHO05D001005 8.0e-06 54.7 48 56.2


User provided reference genes

Program Settings