Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.6e-250 868.2 430 100.0
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 2.0e-210 735.7 430 85.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.8e-172 608.2 347 87.3
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.9e-161 572.4 409 73.1
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.4e-140 501.5 409 67.0
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 7.0e-131 471.5 350 69.4
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 3.8e-92 342.8 436 47.9
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 7.4e-80 302.0 434 42.9
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 1.5e-77 294.3 437 43.9
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.4e-70 271.2 405 43.5
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 2.4e-70 270.4 414 43.2
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 5.9e-69 265.8 436 41.1
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 7.7e-69 265.4 437 39.4
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 2.2e-68 263.8 440 40.0
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 6.5e-68 262.3 443 38.6
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.1e-67 261.5 443 40.2
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 9.4e-67 258.5 435 39.5
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.7e-66 256.9 423 41.8
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.8e-65 254.2 439 40.8
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.3e-63 248.1 431 39.9
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 6.3e-63 245.7 433 38.3
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.4e-62 243.8 424 42.5
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 2.4e-62 243.8 445 36.9
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 5.3e-62 242.7 430 38.4
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 7.0e-62 242.3 435 36.6
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 7.7e-61 238.8 420 37.4
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 1.7e-60 237.7 353 41.6
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.7e-60 237.7 421 37.8
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 2.9e-60 236.9 440 37.5
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 5.5e-59 232.6 440 35.5
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.0e-57 228.4 437 39.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.8e-57 227.6 329 41.9
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.3e-52 211.5 342 40.9
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.7e-52 211.1 348 40.8
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 2.2e-52 210.7 433 34.9
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 2.2e-52 210.7 442 37.3
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 1.1e-51 208.4 434 34.8
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 1.5e-51 208.0 516 33.5
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 8.0e-50 202.2 445 36.2
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.0e-49 201.8 477 33.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.0e-49 201.8 436 32.6
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 5.2e-49 199.5 316 40.8
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 8.3e-47 192.2 432 31.2
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 1.8e-46 191.0 452 33.8
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.4e-46 190.7 446 32.1
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 5.4e-46 189.5 316 39.2
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 7.0e-46 189.1 437 33.6
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 5.9e-45 186.0 441 31.1
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 7.7e-45 185.7 434 32.5
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.0e-44 185.3 426 35.2
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.3e-44 184.9 196 52.6
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 2.9e-44 183.7 426 34.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.9e-44 183.7 427 32.1
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 3.8e-44 183.3 310 40.3
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.8e-44 183.3 426 34.5
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 5.0e-44 183.0 432 34.0
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.5e-43 181.4 439 33.5
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 4.2e-43 179.9 170 55.3
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.2e-43 179.9 424 34.4
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.5e-43 179.5 426 34.3
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 3.6e-42 176.8 310 37.1
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.0e-41 173.7 488 30.9
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 2.0e-40 171.0 178 50.6
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 2.6e-40 170.6 309 37.2
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 4.4e-40 169.9 405 34.6
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 4.4e-40 169.9 437 30.2
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 9.8e-40 168.7 477 29.1
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 1.7e-39 167.9 404 33.4
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 2.2e-39 167.5 417 32.4
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 4.9e-39 166.4 350 32.3
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.4e-38 164.9 230 43.0
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 3.1e-38 163.7 303 36.6
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 8.0e-34 149.1 129 58.1
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 4.0e-33 146.7 353 32.6
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 1.2e-32 145.2 310 33.2
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 4.4e-32 143.3 327 33.3
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.9e-31 140.6 495 27.9
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 3.2e-30 137.1 93 67.7
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 5.9e-29 132.9 354 31.9
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.3e-28 131.0 425 30.1
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 5.2e-25 119.8 90 60.0
PGSC0003DMG402010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 8.9e-25 119.0 62 87.1
Solyc01g067690.4 Solanum lycopersicum HOM05D007369 ORTHO05D051100 1.7e-23 114.8 67 80.6
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 5.4e-22 109.8 372 26.3
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 3.0e-20 104.0 154 39.0
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 8.1e-18 95.9 169 39.6
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.4e-17 95.1 257 32.3
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 4.0e-17 93.6 148 43.2
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 4.4e-16 90.1 169 36.7
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 7.5e-16 89.4 433 25.6
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 7.1e-14 82.8 51 82.4
PGSC0003DMG403010654 Solanum tuberosum HOM05D007369 ORTHO05D051100 4.6e-13 80.1 50 72.0
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.1e-11 75.5 246 29.3
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 3.6e-10 70.5 106 36.8
HanXRQChr03g0080081 Helianthus annuus HOM05D007369 ORTHO05D009369 7.1e-06 56.2 68 47.1
CBR_g38889 Chara braunii HOM05D007369 ORTHO05D009369 9.2e-06 55.8 50 50.0


User provided reference genes

Program Settings