Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 2.6e-63 245.4 136 100.0
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 6.0e-52 207.6 120 90.0
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.0e-51 206.8 120 90.0
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 1.1e-48 196.8 119 87.4
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 9.0e-40 167.2 108 80.6
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 5.8e-39 164.5 112 73.2
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 5.8e-39 164.5 117 74.4
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 4.9e-38 161.4 118 68.6
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.1e-37 160.2 118 68.6
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.9e-37 159.5 120 66.7
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 3.2e-37 158.7 121 68.6
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 4.2e-37 158.3 108 72.2
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 9.3e-37 157.1 113 71.7
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 2.1e-36 156.0 103 73.8
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 2.7e-36 155.6 115 68.7
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 4.6e-36 154.8 113 71.7
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 4.6e-36 154.8 112 72.3
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.6e-36 154.8 121 65.3
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 4.6e-36 154.8 121 65.3
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 7.9e-36 154.1 112 71.4
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 7.9e-36 154.1 113 71.7
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 7.9e-36 154.1 113 71.7
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 7.9e-36 154.1 122 65.6
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.0e-35 153.7 118 67.8
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.3e-35 153.3 126 67.5
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.3e-35 153.3 109 74.3
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 1.3e-35 153.3 120 70.8
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.3e-35 153.3 120 70.8
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 2.3e-35 152.5 112 70.5
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 2.3e-35 152.5 120 63.3
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 3.9e-35 151.8 105 72.4
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 3.9e-35 151.8 134 61.2
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 3.9e-35 151.8 121 64.5
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 5.1e-35 151.4 117 68.4
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 6.7e-35 151.0 106 70.8
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 6.7e-35 151.0 119 69.7
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 6.7e-35 151.0 120 65.0
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 6.7e-35 151.0 110 70.0
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 8.7e-35 150.6 117 68.4
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 8.7e-35 150.6 112 67.0
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 1.5e-34 149.8 114 68.4
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 1.9e-34 149.4 108 73.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.9e-34 149.4 117 67.5
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 1.9e-34 149.4 119 67.2
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 2.5e-34 149.1 108 71.3
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 3.3e-34 148.7 118 65.3
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 3.3e-34 148.7 105 69.5
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 4.3e-34 148.3 121 62.0
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 4.3e-34 148.3 121 63.6
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 4.3e-34 148.3 134 61.2
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 9.6e-34 147.1 123 65.0
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 9.6e-34 147.1 120 62.5
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 1.3e-33 146.7 122 64.8
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.6e-33 146.4 120 63.3
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.6e-33 146.4 120 63.3
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 2.1e-33 146.0 104 70.2
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.1e-33 146.0 109 70.6
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 2.1e-33 146.0 110 67.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 8.2e-33 144.1 121 65.3
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 2.4e-32 142.5 109 63.3
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 5.3e-32 141.4 136 61.8
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 5.3e-32 141.4 103 68.0
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 1.2e-31 140.2 110 67.3
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.5e-31 139.8 121 62.8
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.0e-31 139.4 102 73.5
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 2.0e-31 139.4 103 67.0
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 3.4e-31 138.7 115 64.3
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 4.5e-31 138.3 116 61.2
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.0e-30 137.1 103 67.0
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.0e-30 137.1 108 65.7
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 1.3e-30 136.7 121 61.2
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.2e-30 136.0 121 62.0
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.2e-30 136.0 123 61.0
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.9e-30 135.6 121 62.0
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 3.8e-30 135.2 123 59.3
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 3.8e-30 135.2 121 60.3
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 3.8e-30 135.2 103 66.0
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 3.8e-30 135.2 109 66.1
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 4.9e-30 134.8 109 65.1
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 6.5e-30 134.4 123 62.6
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 6.5e-30 134.4 120 61.7
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 6.5e-30 134.4 120 61.7
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.1e-29 133.7 109 67.0
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.4e-29 133.3 135 57.0
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 1.9e-29 132.9 114 63.2
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 5.5e-29 131.3 134 56.7
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 1.6e-28 129.8 103 64.1
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 3.5e-28 128.6 126 62.7
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 1.8e-27 126.3 105 60.0
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 3.0e-27 125.6 111 60.4
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 3.0e-27 125.6 125 57.6
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.1e-26 123.6 119 59.7
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 1.1e-26 123.6 81 74.1
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 1.9e-26 122.9 129 62.0
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 7.4e-26 120.9 84 71.4
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 8.2e-25 117.5 140 50.0
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.1e-24 117.1 106 55.7
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 1.4e-24 116.7 81 67.9
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 2.6e-23 112.5 107 57.9
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.9e-23 111.3 87 63.2
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 1.0e-22 110.5 125 52.8
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.7e-22 109.8 85 63.5
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 1.1e-21 107.1 140 49.3
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 5.5e-21 104.8 119 52.9
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 9.4e-21 104.0 134 49.3
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 1.0e-19 100.5 109 49.5
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 9.7e-18 94.0 83 59.0
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 3.7e-17 92.0 130 45.4
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 4.8e-17 91.7 63 74.6
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 8.2e-17 90.9 120 50.8
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 1.0e-14 84.0 104 48.1
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 2.2e-14 82.8 81 59.3
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 5.0e-14 81.6 54 72.2
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.1e-13 80.5 123 51.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 2.7e-12 75.9 50 70.0
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 2.7e-12 75.9 50 70.0
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.7e-12 75.1 128 40.6
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.8e-11 73.2 92 50.0


User provided reference genes

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