Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 8.4e-225 783.5 429 100.0
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 2.1e-204 715.7 430 93.5
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 1.1e-203 713.4 425 93.6
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 1.4e-203 713.0 430 93.0
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.8e-187 659.4 425 87.3
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.0e-178 629.4 421 85.3
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 2.0e-165 586.3 421 81.2
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.1e-144 517.3 414 73.7
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 3.0e-142 509.2 415 71.3
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 3.0e-142 509.2 429 70.4
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 1.4e-139 500.4 430 68.6
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 4.5e-138 495.4 428 68.2
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 8.6e-137 491.1 425 68.9
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 2.5e-136 489.6 414 69.8
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 3.1e-134 482.6 425 67.3
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 2.2e-132 476.5 432 66.4
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 2.9e-132 476.1 416 68.8
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.1e-131 474.2 413 69.0
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 2.4e-131 473.0 418 69.1
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 3.2e-131 472.6 416 68.5
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 1.3e-129 467.2 431 66.4
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 1.5e-128 463.8 434 65.4
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 3.3e-128 462.6 433 64.2
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 4.7e-127 458.8 430 65.3
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 1.4e-126 457.2 416 65.6
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 1.8e-126 456.8 422 65.2
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 2.3e-126 456.4 443 63.4
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 4.0e-126 455.7 428 64.0
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 5.2e-126 455.3 450 60.0
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 6.8e-126 454.9 443 65.0
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 8.9e-126 454.5 430 66.3
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.2e-125 454.1 419 65.6
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 1.5e-125 453.8 393 69.7
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 1.5e-125 453.8 430 64.4
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 2.6e-125 453.0 393 69.7
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 9.8e-125 451.1 431 64.0
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.7e-124 449.1 380 69.7
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 8.3e-124 448.0 393 69.0
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 5.4e-123 445.3 425 64.0
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 3.5e-122 442.6 390 67.9
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 3.5e-122 442.6 438 63.5
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 8.6e-121 438.0 405 65.9
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 1.5e-120 437.2 412 66.7
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.5e-120 437.2 424 64.6
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 4.3e-120 435.6 342 75.4
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 4.3e-120 435.6 453 57.4
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 9.5e-120 434.5 437 62.9
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.6e-119 433.7 437 62.9
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.1e-119 433.3 424 63.9
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 6.2e-119 431.8 434 63.4
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 8.3e-116 421.4 428 62.1
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 2.4e-115 419.9 427 61.6
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 2.7e-114 416.4 367 68.9
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 7.8e-114 414.8 392 64.0
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 2.3e-113 413.3 379 66.0
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 5.1e-113 412.1 374 67.1
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 1.5e-112 410.6 378 65.9
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 3.3e-112 409.5 413 61.3
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 4.3e-112 409.1 373 68.1
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.2e-111 407.5 392 62.8
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 1.2e-111 407.5 382 65.7
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 4.7e-111 405.6 387 63.3
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 8.1e-111 404.8 427 60.0
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 3.1e-110 402.9 374 67.6
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 4.0e-110 402.5 420 59.8
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 6.8e-110 401.7 312 76.3
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 8.9e-110 401.4 426 60.8
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 8.9e-110 401.4 375 67.7
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 8.9e-110 401.4 447 57.0
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 5.8e-109 398.7 351 69.2
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 5.8e-109 398.7 364 67.9
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 9.9e-109 397.9 424 59.4
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.7e-108 397.1 359 69.4
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 4.9e-108 395.6 349 70.2
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 4.9e-108 395.6 349 70.2
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 4.9e-108 395.6 390 61.8
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 6.4e-108 395.2 367 65.7
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 6.4e-108 395.2 358 69.6
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 6.4e-108 395.2 349 70.5
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 4.2e-107 392.5 360 69.2
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 1.6e-106 390.6 359 69.4
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 1.6e-106 390.6 359 69.4
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.6e-106 390.6 416 61.1
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 2.1e-106 390.2 383 64.0
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 6.0e-106 388.7 359 66.0
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 1.3e-105 387.5 384 60.7
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 2.3e-105 386.7 340 70.3
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 5.1e-105 385.6 362 63.8
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 8.7e-105 384.8 340 70.9
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 2.6e-101 373.2 409 59.2
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 5.8e-101 372.1 414 58.7
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 9.9e-101 371.3 324 71.6
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 1.4e-99 367.5 396 59.8
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 2.8e-95 353.2 243 75.7
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 3.6e-95 352.8 292 64.7
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 6.2e-95 352.1 393 57.8
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 8.1e-95 351.7 254 72.4
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 3.4e-93 346.3 308 67.2
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 2.2e-92 343.6 320 67.5
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 9.6e-88 328.2 335 62.4
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 1.6e-87 327.4 386 57.0
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 1.8e-81 307.4 299 67.9
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 1.3e-79 301.2 323 61.9
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 6.3e-71 272.3 181 79.6
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 6.5e-68 262.3 422 41.9
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 8.2e-63 245.4 228 62.7
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 3.1e-62 243.4 257 62.6
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 5.1e-57 226.1 368 43.5
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 9.7e-56 221.9 276 57.6
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.6e-53 213.8 233 51.5
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 6.1e-50 202.6 309 46.3
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 1.8e-49 201.1 117 87.2
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 2.3e-49 200.7 299 50.2
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.0e-49 200.3 221 51.1
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.9e-43 181.0 249 51.4
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 2.8e-39 167.2 244 41.0
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 7.7e-37 159.1 208 56.2
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 1.7e-36 157.9 125 69.6
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 8.0e-34 149.1 207 41.1
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 5.4e-30 136.3 77 90.9
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 5.6e-19 99.8 60 83.3
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 6.8e-17 92.8 159 44.7
unitig_736.g22595 Utricularia gibba HOM05D006243 ORTHO05D007688 8.6e-12 75.9 137 35.0
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 1.9e-11 74.7 101 50.5
Hund13037 Selenicereus undatus HOM05D006243 ORTHO05D007688 1.1e-09 68.9 96 39.6


User provided reference genes

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