Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G222.161 Capsicum annuum HOM05D000001 ORTHO05D115150 5.9e-58 227.3 109 100.0
CAN.G222.167 Capsicum annuum HOM05D000001 ORTHO05D010426 3.8e-25 118.2 86 74.4
Solyc11g011860.1 Solanum lycopersicum HOM05D000001 ORTHO05D010426 3.5e-18 95.1 71 67.6
Sopen11g006690 Solanum pennellii HOM05D000001 ORTHO05D010426 3.5e-18 95.1 71 67.6
PGSC0003DMG400013262 Solanum tuberosum HOM05D000001 ORTHO05D010426 5.0e-17 91.3 70 65.7
Nitab4.5_0002214g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010426 1.9e-16 89.4 72 63.9
Nitab4.5_0002465g0030 Nicotiana tabacum HOM05D000001 ORTHO05D010426 1.6e-15 86.3 72 62.5
Cc02_g09190 Coffea canephora HOM05D000001 ORTHO05D010426 4.4e-13 78.2 71 54.9
CSS0017180 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D010426 3.7e-12 75.1 71 53.5
Hma1.2p1_0158F.1_g069910 Hydrangea macrophylla HOM05D000001 ORTHO05D010426 8.3e-12 73.9 71 57.7
Potri.017G137200 Populus trichocarpa HOM05D000001 ORTHO05D010426 8.3e-12 73.9 73 56.2
Sabra17G0054800 Salix brachista HOM05D000001 ORTHO05D010426 8.3e-12 73.9 73 56.2
Sabra17G0111600 Salix brachista HOM05D000001 ORTHO05D010426 8.3e-12 73.9 73 56.2
Sabra17G0111900 Salix brachista HOM05D000001 ORTHO05D010426 8.3e-12 73.9 73 56.2
Sabra17G0114600 Salix brachista HOM05D000001 ORTHO05D010426 8.3e-12 73.9 73 56.2
Cfa007775 Carpinus fangiana HOM05D001684 ORTHO05D010426 1.1e-11 73.6 69 53.6
GSVIVG01000086001 Vitis vinifera HOM05D000001 ORTHO05D010426 2.4e-11 72.4 70 58.6
Lj2P515T36 Lonicera japonica HOM05D000001 ORTHO05D010426 3.2e-11 72.0 71 54.9
Prupe.3G163800 Prunus persica HOM05D000001 ORTHO05D010426 3.2e-11 72.0 71 56.3
MD17G1262400 Malus domestica HOM05D000001 ORTHO05D010426 5.4e-11 71.2 71 54.9
Manes.14G156200 Manihot esculenta HOM05D000001 ORTHO05D010426 7.0e-11 70.9 71 52.1
QL02p059847 Quercus lobata HOM05D000001 ORTHO05D010426 9.2e-11 70.5 73 52.1
Dinv28221 Davidia involucrata HOM05D000001 ORTHO05D010426 2.0e-10 69.3 71 52.1
Haze_14296 Corylus avellana HOM05D000001 ORTHO05D010426 2.7e-10 68.9 69 52.2
TWI36G0656 Tripterygium wilfordii HOM05D000001 ORTHO05D010426 4.6e-10 68.2 70 52.9
CiPaw.03G075200 Carya illinoinensis HOM05D000001 ORTHO05D010426 6.0e-10 67.8 69 53.6
DCAR_003419 Daucus carota HOM05D000001 ORTHO05D010426 1.0e-09 67.0 65 58.5
Oeu047805.3 Olea europaea HOM05D000001 ORTHO05D010426 3.0e-09 65.5 57 57.9
Lalb_Chr24g0393951 Lupinus albus HOM05D000001 ORTHO05D010426 6.6e-09 64.3 63 58.7
Eucgr.F02893 Eucalyptus grandis HOM05D000001 ORTHO05D010426 8.6e-09 63.9 73 47.9
Lj5g0010398 Lotus japonicus HOM05D000001 ORTHO05D010426 1.5e-08 63.2 71 54.9
Migut.A00478 Erythranthe guttata HOM05D000001 ORTHO05D010426 2.5e-08 62.4 70 51.4
CAN.G1273.31 Capsicum annuum HOM05D001606 ORTHO05D002266 3.3e-08 62.0 40 75.0
CAN.G1489.2 Capsicum annuum HOM05D001606 ORTHO05D002266 4.3e-08 61.6 40 75.0
TAR622G0589 Trochodendron aralioides HOM05D000833 ORTHO05D000969 5.6e-08 61.2 71 49.3
TAR622G1267 Trochodendron aralioides HOM05D000001 ORTHO05D010426 5.6e-08 61.2 71 49.3
VMungo0464G1880 Vigna mungo HOM05D000001 ORTHO05D010426 7.3e-08 60.8 65 53.8
CAN.G301.2 Capsicum annuum HOM05D001606 ORTHO05D002266 1.2e-07 60.1 40 75.0
CAN.G990.2 Capsicum annuum HOM05D000541 ORTHO05D000137 1.6e-07 59.7 40 75.0
FvH4_1g28620 Fragaria vesca HOM05D000001 ORTHO05D010426 2.8e-07 58.9 71 49.3
FAN19G0429 Fragaria x ananassa HOM05D000001 ORTHO05D010426 2.8e-07 58.9 71 49.3
Aa31LG9G5900 Aethionema arabicum HOM05D000001 ORTHO05D010426 3.6e-07 58.5 71 45.1
THA.LOC104823821 Tarenaya hassleriana HOM05D000001 ORTHO05D010426 8.0e-07 57.4 75 49.3
Carub.0003s1403 Capsella rubella HOM05D000001 ORTHO05D010426 1.4e-06 56.6 71 46.5
Phvul.004G172900 Phaseolus vulgaris HOM05D000001 ORTHO05D010426 1.8e-06 56.2 62 53.2
AL3G26660 Arabidopsis lyrata HOM05D000001 ORTHO05D010426 2.3e-06 55.8 71 45.1
AT3G14330 Arabidopsis thaliana HOM05D000001 ORTHO05D010426 2.3e-06 55.8 71 45.1
FAN23G1167 Fragaria x ananassa HOM05D000001 ORTHO05D010426 2.3e-06 55.8 71 46.5
Sc19g0000680 Simmondsia chinensis HOM05D000001 ORTHO05D010426 2.3e-06 55.8 71 45.1
CARHR089460 Cardamine hirsuta HOM05D000001 ORTHO05D010426 3.1e-06 55.5 71 47.9
Rhsim10G0182600 Rhododendron simsii HOM05D000001 ORTHO05D010426 5.2e-06 54.7 63 49.2
FAN28G0783 Fragaria x ananassa HOM05D000001 ORTHO05D010426 6.8e-06 54.3 63 50.8
vmacro20492 Vaccinium macrocarpon HOM05D000001 ORTHO05D010426 6.8e-06 54.3 70 47.1


User provided reference genes

Program Settings