Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.3e-88 329.7 165 100.0
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 9.1e-79 297.0 165 89.7
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.9e-77 292.0 165 88.5
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 3.6e-75 285.0 154 91.6
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.8e-74 282.7 167 86.8
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.2e-73 280.0 152 90.1
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 5.7e-73 277.7 167 85.6
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.4e-71 273.1 167 83.8
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 3.8e-69 265.0 168 79.8
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 6.8e-66 254.2 153 81.7
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.2e-65 253.4 165 77.0
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 6.4e-64 247.7 157 79.0
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 1.4e-63 246.5 165 72.7
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 3.2e-63 245.4 153 78.4
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 5.9e-62 241.1 154 77.9
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 7.8e-62 240.7 163 72.4
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 1.3e-61 240.0 153 77.8
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.7e-61 239.6 153 79.1
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 6.6e-61 237.7 153 73.9
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 6.6e-61 237.7 157 72.6
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 1.1e-60 236.9 153 75.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 1.9e-60 236.1 153 75.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.5e-60 235.7 154 72.7
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.5e-60 235.7 154 72.7
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.3e-60 235.3 153 77.1
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 3.3e-60 235.3 153 77.1
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 7.3e-60 234.2 153 73.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 7.3e-60 234.2 153 77.8
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.6e-59 233.0 153 73.9
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 1.6e-59 233.0 153 75.2
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 3.6e-59 231.9 153 75.8
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 4.7e-59 231.5 153 76.5
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 6.2e-59 231.1 157 71.3
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 6.2e-59 231.1 153 72.5
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 8.0e-59 230.7 153 73.9
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 1.8e-58 229.6 153 73.9
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.8e-58 229.6 153 73.9
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 3.1e-58 228.8 155 73.5
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.0e-58 228.4 153 72.5
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 4.0e-58 228.4 157 70.7
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 4.0e-58 228.4 158 69.6
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 4.0e-58 228.4 153 73.2
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 5.2e-58 228.0 153 73.2
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 8.9e-58 227.3 156 72.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 8.9e-58 227.3 154 70.8
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 8.9e-58 227.3 167 74.3
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.2e-57 226.9 159 69.8
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.2e-57 226.9 159 69.8
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 1.2e-57 226.9 158 69.0
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 3.4e-57 225.3 153 70.6
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 5.8e-57 224.6 153 70.6
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 5.8e-57 224.6 153 71.9
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 7.5e-57 224.2 153 71.9
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 7.5e-57 224.2 158 68.4
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 7.5e-57 224.2 157 69.4
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 9.8e-57 223.8 152 71.7
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 3.7e-56 221.9 193 62.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 3.7e-56 221.9 166 64.5
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 4.9e-56 221.5 153 71.2
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 8.3e-56 220.7 152 69.1
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.4e-55 219.9 157 68.2
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 3.2e-55 218.8 187 60.4
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 7.0e-55 217.6 152 69.1
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 1.2e-54 216.9 151 68.2
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 1.2e-54 216.9 153 68.0
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.2e-54 216.9 153 68.6
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 2.7e-54 215.7 154 70.1
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 2.7e-54 215.7 153 70.6
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 3.5e-54 215.3 153 69.9
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 3.0e-53 212.2 153 69.9
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 3.0e-53 212.2 153 71.2
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 5.0e-53 211.5 153 71.2
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 1.5e-52 209.9 155 69.0
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.5e-52 209.9 223 54.3
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 9.5e-52 207.2 153 66.7
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 1.2e-51 206.8 149 69.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.6e-51 206.5 153 66.0
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 1.6e-51 206.5 151 67.5
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 2.1e-51 206.1 153 66.0
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 3.6e-51 205.3 153 65.4
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 4.7e-51 204.9 153 66.0
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 8.1e-51 204.1 133 76.7
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 4.0e-50 201.8 153 65.4
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 5.2e-50 201.4 170 60.6
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 2.0e-49 199.5 157 64.3
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 4.4e-49 198.4 152 62.5
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 7.5e-49 197.6 157 63.1
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 1.1e-44 183.7 123 69.1
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 1.1e-44 183.7 114 74.6
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.5e-44 183.3 165 58.2
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 2.5e-44 182.6 151 59.6
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 3.3e-44 182.2 113 74.3
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.9e-40 168.3 113 68.1
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 4.6e-38 161.8 126 62.7
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 1.0e-37 160.6 108 74.1
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 8.6e-37 157.5 110 72.7
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 9.6e-36 154.1 89 77.5
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 6.2e-35 151.4 153 58.2
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 8.1e-35 151.0 91 78.0
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.6e-30 136.7 75 89.3
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.2e-24 116.3 63 90.5
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 3.2e-23 112.5 153 42.5
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 1.2e-14 84.0 65 64.6
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.7e-14 82.8 81 64.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 5.6e-12 75.1 53 66.0
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 4.0e-10 68.9 47 61.7


User provided reference genes

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