Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2197.1 Capsicum annuum HOM05D008200 ORTHO05D010849 7.3e-123 443.7 200 100.0
PGSC0003DMG400004548 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.6e-101 372.9 206 82.5
PGSC0003DMG400015289 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.0e-100 370.2 206 82.5
Sopen03g029540 Solanum pennellii HOM05D008200 ORTHO05D010849 4.0e-97 358.2 207 78.3
Solyc03g020060.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.9e-95 352.1 207 76.3
Solyc03g020050.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 7.1e-94 347.4 205 77.1
PGSC0003DMG400015290 Solanum tuberosum HOM05D008200 ORTHO05D010849 3.9e-92 341.7 205 76.1
Sopen03g029570 Solanum pennellii HOM05D008200 ORTHO05D010849 1.4e-89 333.2 174 82.2
Nitab4.5_0003324g0100 Nicotiana tabacum HOM05D008200 ORTHO05D010849 3.8e-87 325.1 196 73.0
Nitab4.5_0000363g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.2e-86 321.6 191 73.3
Solyc03g020040.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 2.6e-80 302.4 203 66.5
CAN.G861.41 Capsicum annuum HOM05D008200 ORTHO05D010849 1.3e-79 300.1 227 62.1
Solyc03g020030.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.3e-79 300.1 203 65.5
PGSC0003DMG400015287 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.5e-79 297.7 203 66.0
CAN.G861.42 Capsicum annuum HOM05D008200 ORTHO05D010849 2.5e-78 295.8 202 67.8
Sopen03g029600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.3e-74 283.5 170 71.2
PGSC0003DMG400039762 Solanum tuberosum HOM05D008200 ORTHO05D010849 4.2e-70 268.5 166 68.1
Solyc03g020070.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 5.7e-67 258.1 147 77.6
PGSC0003DMG400004547 Solanum tuberosum HOM05D008200 ORTHO05D010849 6.3e-66 254.6 148 77.0
Sopen03g029560 Solanum pennellii HOM05D008200 ORTHO05D010849 1.8e-65 253.1 147 76.2
Sopen03g029530 Solanum pennellii HOM05D008200 ORTHO05D010849 5.3e-65 251.5 143 78.3
Solyc03g020080.4 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.6e-64 250.0 147 75.5
CAN.G861.46 Capsicum annuum HOM05D008200 ORTHO05D010849 5.7e-59 231.5 197 57.4
PGSC0003DMG400030593 Solanum tuberosum HOM05D008200 ORTHO05D010849 9.7e-59 230.7 144 70.8
CAN.G861.44 Capsicum annuum HOM05D008200 ORTHO05D010849 5.0e-55 218.4 198 55.6
Nitab4.5_0014015g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.2e-53 213.8 194 52.1
Nitab4.5_0010009g0010 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.6e-53 213.4 175 54.3
Peaxi162Scf00391g00728 Petunia axillaris HOM05D008200 ORTHO05D010849 4.1e-49 198.7 226 46.9
Solyc11g020990.3 Solanum lycopersicum HOM05D008200 ORTHO05D010849 4.7e-45 185.3 223 44.4
Solyc11g021060.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.5e-43 180.3 214 43.5
Nitab4.5_0004437g0040 Nicotiana tabacum HOM05D008200 ORTHO05D010849 1.3e-39 167.2 208 40.9
Sopen11g011140 Solanum pennellii HOM05D008200 ORTHO05D010849 2.8e-37 159.5 138 56.5
Nitab4.5_0005255g0020 Nicotiana tabacum HOM05D008200 ORTHO05D010849 4.7e-37 158.7 123 58.5
Sopen03g029590 Solanum pennellii HOM05D008200 ORTHO05D010849 2.0e-35 153.3 103 67.0
Peaxi162Scf00391g00620 Petunia axillaris HOM05D008200 ORTHO05D010849 2.6e-35 152.9 170 44.7
Solyc03g098795.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.6e-32 143.7 147 51.7
Solyc11g020960.2 Solanum lycopersicum HOM05D008200 ORTHO05D010849 8.0e-29 131.3 137 50.4
Sopen11g011150 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-27 127.5 128 46.9
PGSC0003DMG400009267 Solanum tuberosum HOM05D008200 ORTHO05D010849 1.5e-27 127.1 137 49.6
Peaxi162Scf00071g00435 Petunia axillaris HOM05D008200 ORTHO05D010849 1.3e-23 114.0 115 47.0
Sopen03g029580 Solanum pennellii HOM05D008200 ORTHO05D010849 6.6e-23 111.7 76 60.5
Solyc11g021020.1 Solanum lycopersicum HOM05D008200 ORTHO05D010849 1.1e-14 84.3 82 48.8
PGSC0003DMG400024075 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.3e-14 82.8 56 64.3
PGSC0003DMG400009268 Solanum tuberosum HOM05D008200 ORTHO05D010849 7.3e-14 81.6 125 39.2
Solyc03g031895.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.2e-13 80.9 60 60.0
Solyc06g065073.1 Solanum lycopersicum HOM05D008200 ORTHO05D007342 1.2e-13 80.9 56 62.5
Sopen06g023600 Solanum pennellii HOM05D008200 ORTHO05D010849 1.2e-13 80.9 56 62.5
PGSC0003DMG400024067 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.1e-13 80.1 56 62.5
PGSC0003DMG400031328 Solanum tuberosum HOM05D008200 ORTHO05D007342 2.1e-13 80.1 56 62.5
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 2.8e-13 79.7 56 58.9
Peaxi162Scf00071g00049 Petunia axillaris HOM05D008200 ORTHO05D007342 3.6e-13 79.3 56 60.7
PGSC0003DMG400002110 Solanum tuberosum HOM05D008200 ORTHO05D007342 3.6e-13 79.3 51 68.6
CAN.G201.41 Capsicum annuum HOM05D008200 ORTHO05D007342 6.2e-13 78.6 51 64.7
Peaxi162Scf00391g00729 Petunia axillaris HOM05D008200 ORTHO05D007342 8.1e-13 78.2 53 64.2
CAN.G201.40 Capsicum annuum HOM05D008200 ORTHO05D007342 1.1e-12 77.8 51 66.7
Peaxi162Scf00268g00024 Petunia axillaris HOM05D008200 ORTHO05D007342 1.4e-12 77.4 56 62.5
Peaxi162Scf00071g00425 Petunia axillaris HOM05D008200 ORTHO05D007342 2.4e-12 76.6 51 62.7
Nitab4.5_0005382g0020 Nicotiana tabacum HOM05D008200 ORTHO05D007342 4.0e-12 75.9 51 64.7
Nitab4.5_0006133g0030 Nicotiana tabacum HOM05D008200 ORTHO05D007342 7.6e-11 71.6 51 64.7
Peaxi162Scf00391g00730 Petunia axillaris HOM05D008200 ORTHO05D007342 9.9e-11 71.2 53 60.4
Peaxi162Scf00391g00074 Petunia axillaris HOM05D008200 ORTHO05D007342 1.7e-10 70.5 56 51.8
Solyc06g061210.4 Solanum lycopersicum HOM05D001063 ORTHO05D000986 3.2e-09 66.2 41 70.7
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 2.3e-07 60.1 56 44.6
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 5.1e-07 58.9 53 50.9
Solyc07g054720.2 Solanum lycopersicum HOM05D008200 ORTHO05D007342 5.1e-07 58.9 60 41.7
PGSC0003DMG400018328 Solanum tuberosum HOM05D008200 ORTHO05D007342 1.1e-06 57.8 60 40.0
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 1.5e-06 57.4 51 54.9
RcHm_v2.0_Chr7g0228221 Rosa chinensis HOM05D007628 ORTHO05D007342 1.5e-06 57.4 63 46.0
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 2.5e-06 56.6 55 47.3
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 3.3e-06 56.2 57 47.4
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 4.3e-06 55.8 64 45.3
Sopen07g028650 Solanum pennellii HOM05D008200 ORTHO05D010849 5.6e-06 55.5 60 38.3
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 7.3e-06 55.1 55 45.5
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 7.3e-06 55.1 52 46.2


User provided reference genes

Program Settings