Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 0.0e+00 1117.8 658 100.0
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 2.2e-216 756.1 633 76.8
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 1.3e-213 746.9 631 76.4
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 2.3e-213 746.1 633 76.3
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 1.4e-191 673.7 703 63.9
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.2e-191 672.2 645 69.9
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.5e-190 669.1 646 69.2
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 5.7e-164 582.0 636 67.0
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 2.3e-149 533.5 659 53.4
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 7.7e-145 518.5 656 56.1
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 5.0e-144 515.8 655 53.4
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 7.5e-140 501.9 657 51.6
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 1.7e-139 500.7 646 51.4
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.2e-137 494.6 674 51.9
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 1.6e-134 484.2 677 52.0
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 2.7e-134 483.4 644 52.5
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 3.0e-133 479.9 644 53.1
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.8e-133 478.4 650 54.2
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 1.7e-131 474.2 660 50.6
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 2.4e-130 470.3 650 52.6
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.6e-129 467.6 648 50.0
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 1.2e-126 458.0 615 51.4
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 4.0e-125 453.0 650 52.2
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 5.7e-124 449.1 589 61.5
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 5.7e-124 449.1 665 45.7
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 2.8e-123 446.8 656 49.5
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 4.1e-122 443.0 527 56.9
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 4.5e-121 439.5 656 49.8
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 2.3e-120 437.2 631 48.8
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 8.6e-120 435.3 696 46.4
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.1e-119 434.9 592 47.8
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.1e-119 434.9 531 58.9
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 1.6e-118 431.0 656 48.3
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 1.4e-117 427.9 680 47.5
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 3.0e-117 426.8 654 48.9
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 3.4e-116 423.3 648 47.1
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 2.9e-115 420.2 668 43.7
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 3.7e-115 419.9 682 44.9
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 1.1e-114 418.3 672 48.4
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 2.4e-114 417.2 652 51.5
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 4.6e-113 412.9 606 46.2
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 1.5e-111 407.9 647 47.1
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 3.3e-111 406.8 685 47.3
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 7.3e-111 405.6 684 45.2
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.1e-110 404.1 669 46.8
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 4.7e-110 402.9 647 45.0
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 4.7e-110 402.9 608 45.9
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 4.7e-110 402.9 668 44.0
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 4.0e-109 399.8 691 44.6
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.5e-108 397.9 666 45.0
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 9.8e-108 395.2 628 46.0
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 5.4e-106 389.4 680 44.3
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 7.0e-106 389.0 655 46.7
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 1.6e-105 387.9 656 45.1
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 7.8e-105 385.6 647 47.3
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 3.0e-104 383.6 667 44.8
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 5.6e-103 379.4 674 43.0
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 7.3e-103 379.0 673 46.2
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 9.5e-103 378.6 704 40.6
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 6.8e-101 372.5 665 46.5
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 5.8e-100 369.4 645 43.9
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 9.8e-100 368.6 595 46.7
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.1e-98 365.2 678 41.2
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 1.4e-98 364.8 679 41.4
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 2.4e-98 364.0 678 42.9
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 3.2e-98 363.6 583 48.5
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 9.2e-98 362.1 660 44.5
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 3.9e-96 356.7 640 45.8
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 6.6e-96 355.9 686 42.0
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 3.6e-94 350.1 623 41.1
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 1.4e-93 348.2 704 44.2
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 1.7e-91 341.3 658 42.1
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 1.7e-91 341.3 657 46.9
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 2.2e-91 340.9 644 43.2
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 5.4e-90 336.3 678 40.7
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 7.1e-90 335.9 655 45.3
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.7e-88 331.3 332 66.6
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 9.6e-87 325.5 632 44.9
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 1.8e-85 321.2 649 43.8
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 8.9e-85 318.9 683 42.5
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 1.2e-84 318.5 639 40.8
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 2.0e-84 317.8 654 43.0
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 2.6e-84 317.4 544 44.9
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.4e-84 316.6 632 43.5
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 1.3e-83 315.1 692 39.9
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.4e-82 311.6 565 41.9
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 7.1e-82 309.3 366 63.4
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 5.1e-80 303.1 509 44.6
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.1e-79 302.0 606 44.4
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 1.6e-78 298.1 659 41.3
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 2.8e-78 297.4 565 43.9
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.4e-77 294.3 583 40.8
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 4.0e-77 293.5 657 42.2
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 1.2e-76 292.0 573 44.7
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 1.3e-75 288.5 739 37.9
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.5e-71 274.2 337 52.8
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 1.6e-70 271.6 657 37.3
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 2.4e-69 267.7 479 43.6
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 2.6e-68 264.2 680 37.6
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.7e-67 261.5 434 43.5
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.1e-66 258.8 673 36.7
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 4.6e-65 253.4 678 34.5
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.1e-63 248.8 676 34.6
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 4.3e-63 246.9 631 42.0
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 2.0e-60 238.0 421 42.8
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.5e-58 231.1 460 42.2
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 1.2e-57 228.8 639 36.8
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 1.0e-51 209.1 646 33.6
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 2.5e-50 204.5 636 32.9
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.2e-49 202.2 643 32.8
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 1.0e-48 199.1 639 32.7
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 3.9e-48 197.2 636 32.2
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 7.4e-47 193.0 271 43.5
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 2.8e-46 191.0 320 49.1
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 5.0e-43 180.3 190 55.3
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 5.0e-43 180.3 590 36.4
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 2.4e-37 161.4 153 62.1
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 5.0e-35 153.7 672 31.2
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 1.4e-34 152.1 572 32.2
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 1.1e-31 142.5 232 52.2
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 2.8e-30 137.9 609 27.9
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 5.9e-28 130.2 169 46.7
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.7e-25 121.3 108 78.7
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 8.0e-25 119.8 284 38.0
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 3.1e-21 107.8 703 26.2
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 4.1e-21 107.5 137 49.6
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.5e-20 104.0 107 50.5
Nitab4.5_0005621g0100 Nicotiana tabacum HOM05D005724 ORTHO05D006636 4.5e-20 104.0 128 57.8
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 4.7e-17 94.0 512 28.1
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 6.1e-17 93.6 104 59.6
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 1.4e-16 92.4 104 54.8
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 4.8e-14 84.0 176 44.3
AagrBONN_evm.TU.Sc2ySwM_228.4909 Anthoceros agrestis HOM05D005724 ORTHO05D006636 6.8e-08 63.5 69 49.3
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 6.8e-08 63.5 568 26.1


User provided reference genes

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