Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2187.1 Capsicum annuum HOM05D001123 ORTHO05D000966 5.5e-53 210.7 106 100.0
CAN.G5283.1 Capsicum annuum HOM05D001123 ORTHO05D000966 1.0e-46 189.9 106 89.6
CAN.G836.29 Capsicum annuum HOM05D001123 ORTHO05D000966 9.8e-42 173.3 91 94.5
Sopen02g034880 Solanum pennellii HOM05D001123 ORTHO05D000966 5.9e-39 164.1 92 91.3
Solyc02g090190.1 Solanum lycopersicum HOM05D001123 ORTHO05D000966 1.0e-38 163.3 92 90.2
PGSC0003DMG400010030 Solanum tuberosum HOM05D001123 ORTHO05D000966 1.7e-38 162.5 92 91.3
CAN.G21.15 Capsicum annuum HOM05D001123 ORTHO05D000966 5.4e-32 141.0 78 87.2
CAN.G1720.6 Capsicum annuum HOM05D001123 ORTHO05D000966 1.6e-31 139.4 106 72.6
Peaxi162Scf00535g00076 Petunia axillaris HOM05D001123 ORTHO05D000966 2.0e-31 139.0 92 80.4
Nitab4.5_0000108g0250 Nicotiana tabacum HOM05D001123 ORTHO05D000966 4.6e-31 137.9 96 78.1
Nitab4.5_0001014g0100 Nicotiana tabacum HOM05D001123 ORTHO05D000966 1.1e-29 133.3 96 76.0
Dinv39909 Davidia involucrata HOM05D001123 ORTHO05D000966 2.1e-20 102.4 106 55.7
Peaxi162Scf02201g00002 Petunia axillaris HOM05D001123 ORTHO05D000966 6.2e-20 100.9 97 59.8
Oeu039053.1 Olea europaea HOM05D001123 ORTHO05D000966 1.2e-18 96.7 102 57.8
Oeu032932.1 Olea europaea HOM05D001123 ORTHO05D000966 9.8e-18 93.6 97 56.7
Oeu003953.1 Olea europaea HOM05D001123 ORTHO05D000966 2.9e-17 92.0 102 53.9
MSTRG.3406 Avicennia marina HOM05D001123 ORTHO05D000966 8.3e-17 90.5 102 55.9
Atru.chr3.452 Acer truncatum HOM05D001123 ORTHO05D000966 1.1e-16 90.1 109 52.3
Oeu003946.1 Olea europaea HOM05D001123 ORTHO05D000966 1.4e-16 89.7 103 53.4
SalBow1G2401 Salvia bowleyana HOM05D001123 ORTHO05D000966 1.9e-16 89.4 93 58.1
SalBow1G7475 Salvia bowleyana HOM05D001123 ORTHO05D000966 7.1e-16 87.4 93 57.0
QL06p043882 Quercus lobata HOM05D001123 ORTHO05D000966 3.5e-15 85.1 109 49.5
Lj4g0020631 Lotus japonicus HOM05D001123 ORTHO05D000966 6.0e-15 84.3 101 50.5
Psat4g089720 Pisum sativum HOM05D001123 ORTHO05D000966 6.0e-15 84.3 104 51.9
Medtr8g079020 Medicago truncatula HOM05D001123 ORTHO05D000966 1.3e-14 83.2 104 50.0
VMungo0871G0001 Vigna mungo HOM05D001123 ORTHO05D000966 1.3e-14 83.2 99 51.5
Glyma.02G062200 Glycine max HOM05D001123 ORTHO05D000966 2.3e-14 82.4 99 50.5
Glyma.02G062500 Glycine max HOM05D001123 ORTHO05D000966 2.3e-14 82.4 99 50.5
Glyma.16G144500 Glycine max HOM05D001123 ORTHO05D000966 2.3e-14 82.4 99 50.5
Glyma.16G144800 Glycine max HOM05D001123 ORTHO05D000966 2.3e-14 82.4 99 50.5
Phvul.003G248700 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 2.3e-14 82.4 99 50.5
Phvul.003G249000 Phaseolus vulgaris HOM05D001123 ORTHO05D000966 3.0e-14 82.0 99 50.5
SalBow1G5865 Salvia bowleyana HOM05D001123 ORTHO05D000966 3.0e-14 82.0 100 51.0
SalBow1G8715 Salvia bowleyana HOM05D001123 ORTHO05D000966 3.0e-14 82.0 100 51.0
TPR.G11251 Trifolium pratense HOM05D001123 ORTHO05D000966 5.1e-14 81.3 104 50.0
TAR381G1074 Trochodendron aralioides HOM05D001123 ORTHO05D000966 6.6e-14 80.9 110 49.1
MSTRG.23797 Avicennia marina HOM05D001123 ORTHO05D000966 8.6e-14 80.5 101 52.5
Dinv26756 Davidia involucrata HOM05D001123 ORTHO05D000966 8.6e-14 80.5 101 50.5
Lalb_Chr09g0322891 Lupinus albus HOM05D001123 ORTHO05D000966 8.6e-14 80.5 105 48.6
CiPaw.02G012500 Carya illinoinensis HOM05D001123 ORTHO05D000966 1.1e-13 80.1 107 48.6
Ciclev10024810m.g Citrus clementina HOM05D001123 ORTHO05D000966 1.1e-13 80.1 108 48.1
Actinidia12080 Actinidia chinensis HOM05D001123 ORTHO05D000966 1.5e-13 79.7 101 45.5
Hma1.2p1_0546F.1_g176140 Hydrangea macrophylla HOM05D001123 ORTHO05D000966 4.3e-13 78.2 102 50.0
Lj4g0012437 Lotus japonicus HOM05D001123 ORTHO05D000966 4.3e-13 78.2 104 49.0
Ca_22218_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 5.6e-13 77.8 104 48.1
TWI73G0026 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 7.3e-13 77.4 109 49.5
TWI09G1248 Tripterygium wilfordii HOM05D001123 ORTHO05D000966 9.5e-13 77.0 109 50.5
Nn5g29396 Nelumbo nucifera HOM05D001123 ORTHO05D000966 1.2e-12 76.6 103 46.6
TAR625G0798 Trochodendron aralioides HOM05D001123 ORTHO05D000966 1.2e-12 76.6 109 48.6
MSTRG.15408 Avicennia marina HOM05D001123 ORTHO05D000966 1.6e-12 76.3 102 48.0
Ca_22216_v3 Cicer arietinum L. HOM05D001123 ORTHO05D000966 1.6e-12 76.3 104 49.0
Cc07_g05510 Coffea canephora HOM05D001123 ORTHO05D000966 2.1e-12 75.9 106 45.3
Haze_15181 Corylus avellana HOM05D001123 ORTHO05D000966 2.8e-12 75.5 109 47.7
Gohir.D11G195400 Gossypium hirsutum HOM05D001123 ORTHO05D000966 2.8e-12 75.5 108 48.1
MD02G1160800 Malus domestica HOM05D001123 ORTHO05D000966 2.8e-12 75.5 106 49.1
Potri.007G036100 Populus trichocarpa HOM05D001123 ORTHO05D000966 3.6e-12 75.1 101 46.5
Prupe.7G142800 Prunus persica HOM05D001123 ORTHO05D000966 3.6e-12 75.1 108 45.4
Sabra07G0031500 Salix brachista HOM05D001123 ORTHO05D000966 3.6e-12 75.1 101 47.5
CANSAT01G0896 Cannabis sativa HOM05D001123 ORTHO05D000966 4.7e-12 74.7 109 45.0
FAN23G1160 Fragaria x ananassa HOM05D001123 ORTHO05D000966 4.7e-12 74.7 107 48.6
arahy.Tifrunner.gnm1.ann1.Y5U0FM Arachis hypogaea HOM05D001123 ORTHO05D000966 6.2e-12 74.3 98 48.0
Gorai.007G209300 Gossypium raimondii HOM05D001123 ORTHO05D000966 6.2e-12 74.3 108 47.2
Duzib187G1163 Durio zibethinus HOM05D001123 ORTHO05D000966 8.1e-12 73.9 108 49.1
CSS0028279 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 1.1e-11 73.6 101 44.6
CSS0030273 Camellia sinensis var. sinensis HOM05D001123 ORTHO05D000966 1.1e-11 73.6 101 48.5
Lalb_Chr05g0213111 Lupinus albus HOM05D001123 ORTHO05D000966 1.1e-11 73.6 105 46.7
Thecc.01G047600 Theobroma cacao HOM05D001123 ORTHO05D000966 1.1e-11 73.6 108 49.1
arahy.Tifrunner.gnm1.ann1.9HQ4ZM Arachis hypogaea HOM05D001123 ORTHO05D000966 1.4e-11 73.2 98 46.9
FAN19G0422 Fragaria x ananassa HOM05D001123 ORTHO05D000966 1.4e-11 73.2 107 47.7
Potri.005G131300 Populus trichocarpa HOM05D001123 ORTHO05D000966 1.4e-11 73.2 103 49.5
CiPaw.01G026900 Carya illinoinensis HOM05D001123 ORTHO05D000966 1.8e-11 72.8 108 42.6
Gohir.A02G160600 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.8e-11 72.8 102 52.0
Gohir.A11G188900 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.8e-11 72.8 108 48.1
Gohir.D03G019800 Gossypium hirsutum HOM05D001123 ORTHO05D000966 1.8e-11 72.8 102 52.0
FAN26G2494 Fragaria x ananassa HOM05D001123 ORTHO05D000966 2.3e-11 72.4 107 44.9
Psat4g089640 Pisum sativum HOM05D001123 ORTHO05D000966 2.3e-11 72.4 104 48.1
FAN28G2464 Fragaria x ananassa HOM05D001123 ORTHO05D000966 3.1e-11 72.0 107 46.7
RcHm_v2.0_Chr2g0103701 Rosa chinensis HOM05D001123 ORTHO05D000966 3.1e-11 72.0 107 46.7
DCAR_025682 Daucus carota HOM05D001123 ORTHO05D000966 4.0e-11 71.6 101 46.5
Cpa.g.sc15.93 Carica papaya HOM05D001123 ORTHO05D000966 5.2e-11 71.2 107 46.7
MELO3C007525.2 Cucumis melo HOM05D001123 ORTHO05D000966 5.2e-11 71.2 90 47.8
FvH4_1g14760 Fragaria vesca HOM05D001123 ORTHO05D000966 5.2e-11 71.2 107 46.7
Gorai.003G020900 Gossypium raimondii HOM05D001123 ORTHO05D000966 5.2e-11 71.2 102 51.0
COL.COLO4_11320 Corchorus olitorius HOM05D001123 ORTHO05D000966 6.8e-11 70.9 101 48.5
MSTRG.2915 Avicennia marina HOM05D001123 ORTHO05D000966 8.9e-11 70.5 100 51.0
Cfa004220 Carpinus fangiana HOM05D001123 ORTHO05D000966 8.9e-11 70.5 112 44.6
Manes.13G130600 Manihot esculenta HOM05D001123 ORTHO05D000966 8.9e-11 70.5 109 45.9
Medtr8g079040 Medicago truncatula HOM05D001123 ORTHO05D000966 8.9e-11 70.5 104 47.1
SGA_v2.0_scaffold15G07226 Striga asiatica HOM05D001123 ORTHO05D000966 8.9e-11 70.5 91 49.5
MELO3C020927.2 Cucumis melo HOM05D001123 ORTHO05D000966 1.2e-10 70.1 110 46.4
Duzib147G1380 Durio zibethinus HOM05D001123 ORTHO05D000966 1.2e-10 70.1 108 48.1
CsaV3_2G017240 Cucumis sativus L. HOM05D001123 ORTHO05D000966 1.5e-10 69.7 109 45.0
QL06p043869 Quercus lobata HOM05D001123 ORTHO05D000966 2.0e-10 69.3 112 45.5
Duzib264G1054 Durio zibethinus HOM05D001123 ORTHO05D000966 3.4e-10 68.6 108 47.2
Sabra05G0106700 Salix brachista HOM05D001123 ORTHO05D000966 3.4e-10 68.6 103 47.6
Sed0018940 Sechium edule HOM05D001123 ORTHO05D000966 3.4e-10 68.6 103 48.5
Cc10_g03690 Coffea canephora HOM05D001123 ORTHO05D000966 4.4e-10 68.2 110 42.7
MBI16_g31476_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 5.8e-10 67.8 105 43.8
MD15G1274900 Malus domestica HOM05D001123 ORTHO05D000966 5.8e-10 67.8 107 46.7
Cfa018484 Carpinus fangiana HOM05D001123 ORTHO05D000966 7.6e-10 67.4 109 42.2
Haze_17589 Corylus avellana HOM05D001123 ORTHO05D000966 7.6e-10 67.4 109 41.3
MBI16_g19887_MAGBIO Magnolia biondii HOM05D001123 ORTHO05D000966 7.6e-10 67.4 110 43.6
Prupe.1G388400 Prunus persica HOM05D001123 ORTHO05D000966 7.6e-10 67.4 101 46.5
CsaV3_6G042860 Cucumis sativus L. HOM05D001123 ORTHO05D000966 9.9e-10 67.0 103 46.6
ClCG01G016550 Citrullus lanatus HOM05D001123 ORTHO05D000966 1.3e-09 66.6 103 43.7
ClCG02G013130 Citrullus lanatus HOM05D001123 ORTHO05D000966 1.3e-09 66.6 109 45.9
Sed0000471 Sechium edule HOM05D001123 ORTHO05D000966 1.7e-09 66.2 100 44.0
TAR376G0557 Trochodendron aralioides HOM05D001123 ORTHO05D000966 1.7e-09 66.2 109 42.2
Rhsim10G0125300 Rhododendron simsii HOM05D001123 ORTHO05D000966 2.2e-09 65.9 99 47.5
Dinv36013 Davidia involucrata HOM05D001123 ORTHO05D000966 2.9e-09 65.5 110 43.6
MD08G1039700 Malus domestica HOM05D001123 ORTHO05D000966 3.8e-09 65.1 101 43.6
Aqoxy6G00924 Aquilegia oxysepala HOM05D001123 ORTHO05D000966 4.9e-09 64.7 108 40.7
Atru.chr13.596 Acer truncatum HOM05D001123 ORTHO05D000966 8.4e-09 63.9 110 44.5
MD02G1160700 Malus domestica HOM05D001123 ORTHO05D000966 1.1e-08 63.5 107 44.9
MD15G1034300 Malus domestica HOM05D001123 ORTHO05D000966 1.1e-08 63.5 101 42.6
ECA232G2671 Erigeron canadensis HOM05D001123 ORTHO05D000966 1.9e-08 62.8 95 46.3
Eucgr.F00042 Eucalyptus grandis HOM05D001123 ORTHO05D000966 2.4e-08 62.4 106 45.3
PSO339G5770 Papaver somniferum HOM05D001123 ORTHO05D000966 2.4e-08 62.4 100 43.0
PSO801G0208 Papaver somniferum HOM05D001123 ORTHO05D000966 2.4e-08 62.4 101 43.6
Prupe.7G142900 Prunus persica HOM05D001123 ORTHO05D000966 2.4e-08 62.4 108 45.4
CiPaw.16G051500 Carya illinoinensis HOM05D001123 ORTHO05D000966 3.2e-08 62.0 107 40.2
Duzib093G0727 Durio zibethinus HOM05D001123 ORTHO05D000966 4.1e-08 61.6 103 43.7
PGR031G3222 Punica granatum HOM05D001123 ORTHO05D000966 4.1e-08 61.6 101 45.5
Thecc.08G016700 Theobroma cacao HOM05D001123 ORTHO05D000966 4.1e-08 61.6 103 44.7
CiPaw.16G051400 Carya illinoinensis HOM05D001123 ORTHO05D000966 1.2e-07 60.1 107 40.2
PSO675G1213 Papaver somniferum HOM05D001123 ORTHO05D000966 1.2e-07 60.1 109 42.2
Sed0023012 Sechium edule HOM05D001123 ORTHO05D000966 2.1e-07 59.3 103 45.6
Duzib116G0311 Durio zibethinus HOM05D001123 ORTHO05D000966 3.5e-07 58.5 100 43.0
HanXRQChr09g0264431 Helianthus annuus HOM05D001123 ORTHO05D000966 3.5e-07 58.5 96 45.8
GSVIVG01005083001 Vitis vinifera HOM05D001123 ORTHO05D000966 3.5e-07 58.5 101 40.6
RhsimUnG0104800 Rhododendron simsii HOM05D001123 ORTHO05D000966 4.6e-07 58.2 101 40.6
CiPaw.15G066300 Carya illinoinensis HOM05D001123 ORTHO05D000966 6.0e-07 57.8 102 39.2
Manes.12G095200 Manihot esculenta HOM05D001123 ORTHO05D000966 6.0e-07 57.8 108 40.7
SHI08738 Sapria himalayana HOM05D001123 ORTHO05D000966 6.0e-07 57.8 101 40.6
THA.LOC104807577 Tarenaya hassleriana HOM05D001123 ORTHO05D000966 7.8e-07 57.4 104 43.3
Lj4P137T28 Lonicera japonica HOM05D001123 ORTHO05D000966 1.0e-06 57.0 95 45.3
CANSAT25G0047 Cannabis sativa HOM05D001123 ORTHO05D000966 2.3e-06 55.8 96 43.8
HanXRQChr15g0489681 Helianthus annuus HOM05D001123 ORTHO05D000966 2.3e-06 55.8 96 43.8
EL10Ac6g15141 Beta vulgaris HOM05D001123 ORTHO05D000966 3.0e-06 55.5 92 40.2
RcHm_v2.0_Chr2g0103691 Rosa chinensis HOM05D001123 ORTHO05D000966 3.9e-06 55.1 102 43.1
COL.COLO4_26427 Corchorus olitorius HOM05D001123 ORTHO05D000966 5.1e-06 54.7 103 43.7
FAN01G0511 Fragaria x ananassa HOM05D001123 ORTHO05D000966 5.1e-06 54.7 103 40.8
SGA_v2.0_scaffold204G41616 Striga asiatica HOM05D001123 ORTHO05D000966 5.1e-06 54.7 102 46.1
unitig_899.g14646 Utricularia gibba HOM05D001123 ORTHO05D000966 5.1e-06 54.7 91 45.1
DCAR_010937 Daucus carota HOM05D001123 ORTHO05D000966 6.6e-06 54.3 44 63.6
Migut.H00489 Erythranthe guttata HOM05D001123 ORTHO05D000966 8.6e-06 53.9 99 41.4
RcHm_v2.0_Chr1g0372571 Rosa chinensis HOM05D001123 ORTHO05D000966 8.6e-06 53.9 103 43.7


User provided reference genes

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