Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G216.8 Capsicum annuum HOM05D005369 ORTHO05D006955 3.2e-54 214.9 114 100.0
CAN.G184.84 Capsicum annuum HOM05D005369 ORTHO05D006955 4.9e-39 164.5 109 82.6
Solyc05g009910.3 Solanum lycopersicum HOM05D005369 ORTHO05D006955 6.2e-34 147.5 104 78.8
Sopen05g005710 Solanum pennellii HOM05D005369 ORTHO05D006955 6.2e-34 147.5 104 78.8
PGSC0003DMG400000806 Solanum tuberosum HOM05D005369 ORTHO05D006955 5.2e-33 144.4 104 77.9
Nitab4.5_0011812g0010 Nicotiana tabacum HOM05D005369 ORTHO05D006955 6.8e-33 144.1 104 77.9
Nitab4.5_0005803g0060 Nicotiana tabacum HOM05D005369 ORTHO05D006955 2.0e-32 142.5 104 76.9
QL01p001045 Quercus lobata HOM05D005369 ORTHO05D006955 1.8e-25 119.4 110 60.0
Potri.010G130300 Populus trichocarpa HOM05D005369 ORTHO05D006955 5.2e-25 117.9 108 63.0
Peaxi162Scf00367g00088 Petunia axillaris HOM05D005369 ORTHO05D006955 2.0e-24 115.9 95 67.4
Lj3A1020T60 Lonicera japonica HOM05D005369 ORTHO05D006955 3.8e-23 111.7 105 57.1
Cpa.g.sc53.119 Carica papaya HOM05D005369 ORTHO05D006955 6.4e-23 110.9 108 60.2
Cc11_g10670 Coffea canephora HOM05D005369 ORTHO05D006955 6.4e-23 110.9 101 63.4
arahy.Tifrunner.gnm1.ann1.1BLX98 Arachis hypogaea HOM05D005369 ORTHO05D006955 1.1e-22 110.2 113 57.5
arahy.Tifrunner.gnm1.ann1.DD8P8M Arachis hypogaea HOM05D005369 ORTHO05D006955 1.1e-22 110.2 113 57.5
Phvul.001G005600 Phaseolus vulgaris HOM05D005369 ORTHO05D006955 1.9e-22 109.4 106 62.3
Hma1.2p1_0862F.1_g229880 Hydrangea macrophylla HOM05D005369 ORTHO05D006955 2.4e-22 109.0 106 58.5
Lalb_Chr21g0313361 Lupinus albus HOM05D005369 ORTHO05D006955 2.4e-22 109.0 113 55.8
Cfa018636 Carpinus fangiana HOM05D005369 ORTHO05D006955 3.2e-22 108.6 109 57.8
Lalb_Chr02g0151791 Lupinus albus HOM05D005369 ORTHO05D006955 3.2e-22 108.6 113 56.6
Potri.008G115700 Populus trichocarpa HOM05D005369 ORTHO05D006955 3.2e-22 108.6 107 58.9
Ciclev10032187m.g Citrus clementina HOM05D005369 ORTHO05D006955 5.4e-22 107.8 105 58.1
Rhsim09G0113000 Rhododendron simsii HOM05D005369 ORTHO05D006955 5.4e-22 107.8 107 57.9
CSS0041757 Camellia sinensis var. sinensis HOM05D005369 ORTHO05D006955 7.1e-22 107.5 107 59.8
FvH4_4g28180 Fragaria vesca HOM05D005369 ORTHO05D006955 7.1e-22 107.5 105 59.0
FAN12G2281 Fragaria x ananassa HOM05D005369 ORTHO05D006955 7.1e-22 107.5 105 59.0
SalBow8G4109 Salvia bowleyana HOM05D005369 ORTHO05D006955 7.1e-22 107.5 108 56.5
TPR.G18699 Trifolium pratense HOM05D005369 ORTHO05D006955 7.1e-22 107.5 108 58.3
ClCG05G023060 Citrullus lanatus HOM05D005369 ORTHO05D006955 9.3e-22 107.1 108 57.4
FAN07G1070 Fragaria x ananassa HOM05D005369 ORTHO05D006955 9.3e-22 107.1 105 59.0
FAN22G1382 Fragaria x ananassa HOM05D005369 ORTHO05D006955 9.3e-22 107.1 105 58.1
Psat6g179520 Pisum sativum HOM05D005369 ORTHO05D006955 9.3e-22 107.1 108 59.3
THA.LOC104800064 Tarenaya hassleriana HOM05D005369 ORTHO05D006955 9.3e-22 107.1 108 58.3
RcHm_v2.0_Chr4g0435941 Rosa chinensis HOM05D005369 ORTHO05D006955 1.2e-21 106.7 105 58.1
VMungo1215G0010 Vigna mungo HOM05D005369 ORTHO05D006955 1.2e-21 106.7 108 61.1
FAN17G2107 Fragaria x ananassa HOM05D005369 ORTHO05D006955 2.1e-21 105.9 105 58.1
CiPaw.15G002800 Carya illinoinensis HOM05D005369 ORTHO05D006955 2.7e-21 105.5 109 58.7
CsaV3_5G033930 Cucumis sativus L. HOM05D005369 ORTHO05D006955 6.0e-21 104.4 106 57.5
TAR622G0781 Trochodendron aralioides HOM05D005369 ORTHO05D006955 6.0e-21 104.4 101 60.4
TAR622G1222 Trochodendron aralioides HOM05D005369 ORTHO05D006955 6.0e-21 104.4 101 60.4
MELO3C012211.2 Cucumis melo HOM05D005369 ORTHO05D006955 7.8e-21 104.0 106 57.5
Phvul.003G026300 Phaseolus vulgaris HOM05D005369 ORTHO05D006955 7.8e-21 104.0 108 60.2
Prupe.1G304600 Prunus persica HOM05D005369 ORTHO05D006955 7.8e-21 104.0 106 57.5
Sabra08G0087600 Salix brachista HOM05D005369 ORTHO05D006955 1.0e-20 103.6 107 56.1
CANSAT64G0649 Cannabis sativa HOM05D005369 ORTHO05D006955 1.3e-20 103.2 107 54.2
COL.COLO4_07861 Corchorus olitorius HOM05D005369 ORTHO05D006955 1.7e-20 102.8 104 56.7
Actinidia14846 Actinidia chinensis HOM05D005369 ORTHO05D006955 2.3e-20 102.4 107 55.1
Glyma.01G089100 Glycine max HOM05D005369 ORTHO05D006955 2.3e-20 102.4 107 57.9
PGR119G0805 Punica granatum HOM05D005369 ORTHO05D006955 2.3e-20 102.4 110 55.5
Sed0002723 Sechium edule HOM05D005369 ORTHO05D006955 2.3e-20 102.4 105 56.2
Ca_10520_v3 Cicer arietinum L. HOM05D005369 ORTHO05D006955 3.0e-20 102.1 109 56.0
Glyma.02G100900 Glycine max HOM05D005369 ORTHO05D006955 3.0e-20 102.1 107 57.0
Medtr1g093770 Medicago truncatula HOM05D005369 ORTHO05D006955 3.0e-20 102.1 104 58.7
unitig_744.g24076 Utricularia gibba HOM05D005369 ORTHO05D006955 3.0e-20 102.1 109 54.1
Lj2g0009483 Lotus japonicus HOM05D005369 ORTHO05D006955 3.9e-20 101.7 106 57.5
CDE08G0426 Ceratophyllum demersum HOM05D005369 ORTHO05D006955 5.1e-20 101.3 105 57.1
MD13G1047300 Malus domestica HOM05D005369 ORTHO05D006955 5.1e-20 101.3 103 56.3
Thecc.02G362000 Theobroma cacao HOM05D005369 ORTHO05D006955 5.1e-20 101.3 113 53.1
Duzib248G0106 Durio zibethinus HOM05D005369 ORTHO05D006955 6.6e-20 100.9 101 59.4
MD16G1049100 Malus domestica HOM05D005369 ORTHO05D006955 6.6e-20 100.9 108 55.6
EL10Ac6g14509 Beta vulgaris HOM05D005369 ORTHO05D006955 8.7e-20 100.5 108 54.6
DCAR_030087 Daucus carota HOM05D005369 ORTHO05D006955 8.7e-20 100.5 105 55.2
Migut.L01099 Erythranthe guttata HOM05D005369 ORTHO05D006955 8.7e-20 100.5 107 56.1
Atru.chr11.1367 Acer truncatum HOM05D005369 ORTHO05D006955 1.1e-19 100.1 106 56.6
AUR62035293 Chenopodium quinoa HOM05D005369 ORTHO05D006955 1.9e-19 99.4 106 55.7
TAR374G0397 Trochodendron aralioides HOM05D005369 ORTHO05D006955 1.9e-19 99.4 104 57.7
TAR374G1244 Trochodendron aralioides HOM05D005369 ORTHO05D006955 1.9e-19 99.4 104 57.7
Duzib251G0390 Durio zibethinus HOM05D005369 ORTHO05D006955 3.3e-19 98.6 101 58.4
Zm00001eb431600 Zea mays HOM05D005369 ORTHO05D006955 3.3e-19 98.6 106 53.8
MSTRG.7694 Avicennia marina HOM05D005369 ORTHO05D006955 5.6e-19 97.8 107 55.1
C03p72750 Brassica napus HOM05D005369 ORTHO05D006955 5.6e-19 97.8 110 54.5
A08p27110 Brassica napus HOM05D005369 ORTHO05D006955 7.3e-19 97.4 109 55.0
BraA08t34656Z Brassica rapa HOM05D005369 ORTHO05D006955 7.3e-19 97.4 109 55.0
Carub.0001s2489 Capsella rubella HOM05D005369 ORTHO05D006955 7.3e-19 97.4 107 56.1
CDE09G0148 Ceratophyllum demersum HOM05D005369 ORTHO05D009095 7.3e-19 97.4 105 54.3
DCAR_007223 Daucus carota HOM05D005369 ORTHO05D006955 7.3e-19 97.4 106 53.8
GSVIVG01011963001 Vitis vinifera HOM05D000398 ORTHO05D000551 7.3e-19 97.4 109 53.2
Actinidia16612 Actinidia chinensis HOM05D005369 ORTHO05D006955 9.6e-19 97.1 107 54.2
BcaC05g26649 Brassica carinata HOM05D005369 ORTHO05D006955 9.6e-19 97.1 109 54.1
BolC3t19573H Brassica oleracea HOM05D005369 ORTHO05D006955 9.6e-19 97.1 110 55.5
Manes.14G096800 Manihot esculenta HOM05D005369 ORTHO05D006955 9.6e-19 97.1 101 55.4
BolC5t31214H Brassica oleracea HOM05D005369 ORTHO05D006955 1.6e-18 96.3 108 55.6
TWI31G0309 Tripterygium wilfordii HOM05D005369 ORTHO05D006955 1.6e-18 96.3 104 54.8
AUR62002925 Chenopodium quinoa HOM05D005369 ORTHO05D006955 2.1e-18 95.9 106 55.7
Thhalv10008252m.g Eutrema salsugineum HOM05D005369 ORTHO05D006955 2.1e-18 95.9 107 54.2
Gohir.D12G174200 Gossypium hirsutum HOM05D005369 ORTHO05D006955 2.1e-18 95.9 104 55.8
Gorai.008G186900 Gossypium raimondii HOM05D005369 ORTHO05D006955 2.1e-18 95.9 104 55.8
AL1G39700 Arabidopsis lyrata HOM05D005369 ORTHO05D006955 2.8e-18 95.5 112 54.5
A09p39670 Brassica napus HOM05D005369 ORTHO05D006955 2.8e-18 95.5 108 54.6
BraA09t39463Z Brassica rapa HOM05D005369 ORTHO05D006955 2.8e-18 95.5 108 54.6
ECA246G2775 Erigeron canadensis HOM05D005369 ORTHO05D006955 2.8e-18 95.5 99 57.6
HanXRQChr02g0043381 Helianthus annuus HOM05D005369 ORTHO05D006955 2.8e-18 95.5 106 54.7
Gohir.A12G171800 Gossypium hirsutum HOM05D005369 ORTHO05D006955 3.6e-18 95.1 104 55.8
Sp1g22610 Schrenkiella parvula HOM05D005369 ORTHO05D006955 3.6e-18 95.1 107 54.2
ATR0681G333 Amborella trichopoda HOM05D005369 ORTHO05D006955 4.8e-18 94.7 104 54.8
AT1G25682 Arabidopsis thaliana HOM05D005369 ORTHO05D006955 4.8e-18 94.7 104 55.8
BcaB03g12082 Brassica carinata HOM05D005369 ORTHO05D006955 4.8e-18 94.7 108 55.6
Haze_17433 Corylus avellana HOM05D005369 ORTHO05D006955 1.1e-17 93.6 109 52.3
C05p24850 Brassica napus HOM05D005369 ORTHO05D006955 1.4e-17 93.2 108 53.7
Os02g0324300 Oryza sativa ssp. japonica HOM05D005369 ORTHO05D006955 1.8e-17 92.8 106 53.8
Nn4g23711 Nelumbo nucifera HOM05D005369 ORTHO05D006955 2.4e-17 92.4 103 54.4
SGA_v2.0_scaffold16G07883 Striga asiatica HOM05D005369 ORTHO05D006955 3.1e-17 92.0 103 52.4
Lsat_1_v5_gn_3_58161 Lactuca sativa HOM05D005369 ORTHO05D006955 4.0e-17 91.7 103 54.4
Sc11g0003050 Simmondsia chinensis HOM05D005369 ORTHO05D006955 4.0e-17 91.7 107 52.3
BcaNung06366 Brassica carinata HOM05D005369 ORTHO05D006955 5.3e-17 91.3 110 54.5
CARHR025850 Cardamine hirsuta HOM05D005369 ORTHO05D006955 6.9e-17 90.9 108 53.7
Eucgr.G02355 Eucalyptus grandis HOM05D005369 ORTHO05D006955 9.0e-17 90.5 107 54.2
HPP92_005307 Vanilla planifolia HOM05D005369 ORTHO05D006955 1.5e-16 89.7 108 50.0
FAN28G2319 Fragaria x ananassa HOM05D005369 ORTHO05D006955 9.9e-16 87.0 106 50.9
Ah.03g137930 Amaranthus hybridus HOM05D005369 ORTHO05D006955 3.8e-15 85.1 95 55.8
SEGI_22738 Sequoiadendron giganteum HOM05D005369 ORTHO05D006955 3.8e-15 85.1 103 51.5
PSO063G4132 Papaver somniferum HOM05D005369 ORTHO05D006955 4.9e-15 84.7 102 51.0
SMO353G0425 Selaginella moellendorffii HOM05D005369 ORTHO05D006955 1.1e-14 83.6 102 52.0
PSO782G4917 Papaver somniferum HOM05D005369 ORTHO05D006955 1.4e-14 83.2 102 50.0
Pp3c18_5500 Physcomitrium patens HOM05D005369 ORTHO05D006955 3.3e-11 72.0 107 45.8
FAN26G1965 Fragaria x ananassa HOM05D005369 ORTHO05D006955 9.6e-11 70.5 87 50.6
Mapoly0084s0019 Marchantia polymorpha HOM05D005369 ORTHO05D006955 1.3e-10 70.1 109 44.0
AagrBONN_evm.TU.Sc2ySwM_362.2009 Anthoceros agrestis HOM05D005369 ORTHO05D006955 1.6e-10 69.7 114 45.6
Aqoxy5G00581 Aquilegia oxysepala HOM05D005369 ORTHO05D006955 3.6e-10 68.6 107 39.3
Aa31LG7G8920 Aethionema arabicum HOM05D005369 ORTHO05D006955 4.8e-10 68.2 107 42.1
vmacro11462 Vaccinium macrocarpon HOM05D005369 ORTHO05D006955 1.1e-09 67.0 107 41.1
Sabra10G0099400 Salix brachista HOM05D005369 ORTHO05D006955 2.9e-07 58.9 44 68.2


User provided reference genes

Program Settings