Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2159.1 Capsicum annuum HOM05D004764 ORTHO05D005580 6.7e-213 743.8 394 100.0
CAN.G308.66 Capsicum annuum HOM05D004764 ORTHO05D005580 3.5e-161 572.0 318 96.9
Sopen03g006610 Solanum pennellii HOM05D004764 ORTHO05D005580 3.3e-159 565.5 318 95.3
Nitab4.5_0012769g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 6.4e-155 551.2 318 91.2
Nitab4.5_0000344g0160 Nicotiana tabacum HOM05D004764 ORTHO05D005580 2.4e-154 549.3 318 91.2
Solyc04g071730.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 1.6e-153 546.6 318 92.5
PGSC0003DMG400006372 Solanum tuberosum HOM05D004764 ORTHO05D005580 1.6e-153 546.6 318 92.8
Sopen04g027710 Solanum pennellii HOM05D004764 ORTHO05D005580 1.0e-152 543.9 318 91.8
Peaxi162Scf00064g00126 Petunia axillaris HOM05D004764 ORTHO05D005580 3.1e-141 505.8 318 86.2
Peaxi162Scf00010g01114 Petunia axillaris HOM05D004764 ORTHO05D005580 2.6e-140 502.7 318 85.8
Solyc03g033850.3 Solanum lycopersicum HOM05D004764 ORTHO05D005580 1.3e-136 490.3 281 93.2
Migut.F01566 Erythranthe guttata HOM05D004764 ORTHO05D005580 4.0e-133 478.8 319 79.0
SGA_v2.0_scaffold130G34221 Striga asiatica HOM05D004764 ORTHO05D005580 4.9e-131 471.9 330 76.4
Cc02_g20660 Coffea canephora HOM05D004764 ORTHO05D005580 3.2e-130 469.2 318 76.7
MSTRG.8305 Avicennia marina HOM05D004764 ORTHO05D005580 5.5e-130 468.4 318 77.4
vmacro01597 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.2e-129 467.2 318 77.7
CSS0016003 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 1.0e-128 464.2 318 76.7
CSS0010099 Camellia sinensis var. sinensis HOM05D004764 ORTHO05D005580 3.9e-128 462.2 318 76.4
Dinv20933 Davidia involucrata HOM05D004764 ORTHO05D005580 3.9e-128 462.2 318 75.8
Dinv21011 Davidia involucrata HOM05D004764 ORTHO05D005580 3.9e-128 462.2 318 75.8
Lj1A432T27 Lonicera japonica HOM05D004764 ORTHO05D005580 8.7e-128 461.1 318 76.4
SalBow6G7043 Salvia bowleyana HOM05D004764 ORTHO05D005580 2.5e-127 459.5 318 76.4
GSVIVG01016388001 Vitis vinifera HOM05D004764 ORTHO05D005580 4.3e-127 458.8 318 75.8
Lj1C949T1 Lonicera japonica HOM05D004764 ORTHO05D005580 1.3e-126 457.2 318 76.7
Ciclev10032191m.g Citrus clementina HOM05D004764 ORTHO05D005580 2.2e-126 456.4 318 74.8
QL07p043722 Quercus lobata HOM05D004764 ORTHO05D005580 9.0e-125 451.1 317 74.8
CANSAT21G1253 Cannabis sativa HOM05D004764 ORTHO05D005580 4.5e-124 448.7 318 74.5
TWI73G0601 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 5.9e-124 448.4 318 74.5
Cpa.g.sc19.234 Carica papaya HOM05D004764 ORTHO05D005580 7.6e-124 448.0 318 75.2
Potri.010G194300 Populus trichocarpa HOM05D004764 ORTHO05D005580 7.6e-124 448.0 318 74.2
Rhsim09G0171300 Rhododendron simsii HOM05D004764 ORTHO05D005580 6.5e-123 444.9 362 67.7
Cfa017589 Carpinus fangiana HOM05D004764 ORTHO05D005580 8.5e-123 444.5 318 73.0
Manes.10G019100 Manihot esculenta HOM05D004764 ORTHO05D005580 8.5e-123 444.5 318 74.5
TWI09G1390 Tripterygium wilfordii HOM05D004764 ORTHO05D005580 1.9e-122 443.4 318 73.6
MD02G1196300 Malus domestica HOM05D004764 ORTHO05D005580 7.2e-122 441.4 318 73.6
CiPaw.10G131000 Carya illinoinensis HOM05D004764 ORTHO05D005580 9.3e-122 441.0 318 72.6
HanXRQChr12g0369401 Helianthus annuus HOM05D004764 ORTHO05D005580 9.3e-122 441.0 318 72.6
Ciclev10016032m.g Citrus clementina HOM05D004764 ORTHO05D005580 3.6e-121 439.1 318 72.0
Medtr6g084580 Medicago truncatula HOM05D004764 ORTHO05D005580 4.6e-121 438.7 318 73.9
Psat1g037840 Pisum sativum HOM05D004764 ORTHO05D005580 6.1e-121 438.3 318 73.3
THA.LOC104816565 Tarenaya hassleriana HOM05D004764 ORTHO05D005580 6.1e-121 438.3 318 73.6
COL.COLO4_25609 Corchorus olitorius HOM05D004764 ORTHO05D005580 7.9e-121 438.0 318 73.3
Atru.chr12.285 Acer truncatum HOM05D004764 ORTHO05D005580 1.0e-120 437.6 318 71.7
Lj2g0017902 Lotus japonicus HOM05D004764 ORTHO05D005580 1.0e-120 437.6 318 73.6
Atru.chr12.324 Acer truncatum HOM05D004764 ORTHO05D005580 1.3e-120 437.2 318 71.4
DCAR_011775 Daucus carota HOM05D004764 ORTHO05D005580 1.3e-120 437.2 318 73.0
Prupe.2G152400 Prunus persica HOM05D004764 ORTHO05D005580 1.8e-120 436.8 318 72.0
Ca_25497_v3 Cicer arietinum L. HOM05D004764 ORTHO05D005580 2.3e-120 436.4 318 73.0
Duzib106G0320 Durio zibethinus HOM05D004764 ORTHO05D005580 6.7e-120 434.9 318 73.3
TAR369G1012 Trochodendron aralioides HOM05D004764 ORTHO05D005580 6.7e-120 434.9 324 72.2
ECA233G3311 Erigeron canadensis HOM05D004764 ORTHO05D005580 1.1e-119 434.1 319 72.7
Hund16007 Selenicereus undatus HOM05D004764 ORTHO05D005580 1.5e-119 433.7 318 72.3
TAR623G1788 Trochodendron aralioides HOM05D004764 ORTHO05D005580 1.5e-119 433.7 318 73.3
Gorai.011G278800 Gossypium raimondii HOM05D004764 ORTHO05D005580 3.3e-119 432.6 318 72.3
Lj1g0004796 Lotus japonicus HOM05D004764 ORTHO05D005580 4.3e-119 432.2 318 72.3
MD07G1124900 Malus domestica HOM05D004764 ORTHO05D005580 4.3e-119 432.2 318 71.7
VMungo0464G2049 Vigna mungo HOM05D004764 ORTHO05D005580 5.7e-119 431.8 318 71.1
Gohir.A10G228400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 9.7e-119 431.0 318 72.0
Aa31LG10G3070 Aethionema arabicum HOM05D004764 ORTHO05D005580 1.3e-118 430.6 319 72.7
Thecc.10G137500 Theobroma cacao HOM05D004764 ORTHO05D005580 3.7e-118 429.1 318 72.3
EL10Ac2g04766 Beta vulgaris HOM05D004764 ORTHO05D005580 8.2e-118 427.9 318 72.6
Phvul.004G157700 Phaseolus vulgaris HOM05D004764 ORTHO05D005580 8.2e-118 427.9 318 70.1
Glyma.09G184900 Glycine max HOM05D004764 ORTHO05D005580 2.4e-117 426.4 318 70.8
Sed0006926 Sechium edule HOM05D004764 ORTHO05D005580 1.2e-116 424.1 319 71.8
MELO3C008270.2 Cucumis melo HOM05D004764 ORTHO05D005580 1.5e-116 423.7 321 71.0
AL1G59680 Arabidopsis lyrata HOM05D004764 ORTHO05D005580 5.9e-116 421.8 322 70.8
CARHR041910 Cardamine hirsuta HOM05D004764 ORTHO05D005580 7.7e-116 421.4 318 69.5
PGR142G0534 Punica granatum HOM05D004764 ORTHO05D005580 1.0e-115 421.0 319 70.8
Lsat_1_v5_gn_8_14200 Lactuca sativa HOM05D004764 ORTHO05D005580 1.7e-115 420.2 315 71.1
Sp1g38390 Schrenkiella parvula HOM05D004764 ORTHO05D005580 3.8e-115 419.1 318 70.1
Lalb_Chr14g0371191 Lupinus albus HOM05D004764 ORTHO05D005580 5.0e-115 418.7 318 71.7
Lalb_Chr22g0353041 Lupinus albus HOM05D004764 ORTHO05D005580 6.5e-115 418.3 318 70.8
FAN10G3109 Fragaria x ananassa HOM05D004764 ORTHO05D005580 8.5e-115 417.9 318 69.8
RcHm_v2.0_Chr1g0351821 Rosa chinensis HOM05D004764 ORTHO05D005580 1.4e-114 417.2 318 69.5
ClCG11G006420 Citrullus lanatus HOM05D004764 ORTHO05D005580 1.9e-114 416.8 321 70.4
Aqoxy7G01280 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 2.5e-114 416.4 318 70.4
Thhalv10011542m.g Eutrema salsugineum HOM05D004764 ORTHO05D005580 3.2e-114 416.0 318 69.8
Ah.16g104720 Amaranthus hybridus HOM05D004764 ORTHO05D005580 4.2e-114 415.6 318 68.9
Aqoxy1G00756 Aquilegia oxysepala HOM05D004764 ORTHO05D005580 9.4e-114 414.5 318 69.2
FAN10G1216 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.2e-113 414.1 317 69.1
FvH4_7g12790 Fragaria vesca HOM05D004764 ORTHO05D005580 1.6e-113 413.7 318 68.9
AT1G51740 Arabidopsis thaliana HOM05D004764 ORTHO05D005580 4.7e-113 412.1 319 70.2
arahy.Tifrunner.gnm1.ann1.BR1H5V Arachis hypogaea HOM05D004764 ORTHO05D005580 6.1e-113 411.8 318 69.5
Carub.0001s4061 Capsella rubella HOM05D004764 ORTHO05D005580 1.4e-112 410.6 322 69.3
Eucgr.G03020 Eucalyptus grandis HOM05D004764 ORTHO05D005580 1.8e-112 410.2 318 71.1
Ah.02g115950 Amaranthus hybridus HOM05D004764 ORTHO05D005580 3.0e-112 409.5 318 67.9
Actinidia00927 Actinidia chinensis HOM05D004764 ORTHO05D005580 2.6e-111 406.4 374 62.8
BcaB02g11053 Brassica carinata HOM05D004764 ORTHO05D005580 4.4e-111 405.6 321 67.3
PSO585G0029 Papaver somniferum HOM05D004764 ORTHO05D005580 9.1e-109 397.9 318 67.0
FAN01G0026 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.2e-108 397.5 353 61.8
unitig_0.g2163 Utricularia gibba HOM05D004764 ORTHO05D005580 2.6e-108 396.4 321 67.9
arahy.Tifrunner.gnm1.ann1.V0Z2W7 Arachis hypogaea HOM05D004764 ORTHO05D005580 3.4e-108 396.0 318 67.0
PSO384G2817 Papaver somniferum HOM05D004764 ORTHO05D005580 7.7e-108 394.8 318 67.3
A06p02240 Brassica napus HOM05D004764 ORTHO05D005580 1.4e-106 390.6 302 70.2
BolC6t35797H Brassica oleracea HOM05D004764 ORTHO05D005580 1.4e-106 390.6 302 70.2
Os04g0530400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 2.5e-106 389.8 319 67.4
Os12g0154400 Oryza sativa ssp. japonica HOM05D004764 ORTHO05D005580 3.2e-106 389.4 319 67.1
BraA06t23434Z Brassica rapa HOM05D004764 ORTHO05D005580 4.2e-106 389.0 302 69.9
Gohir.D10G242400 Gossypium hirsutum HOM05D004764 ORTHO05D005580 1.2e-105 387.5 286 72.7
Oeu013001.1 Olea europaea HOM05D004764 ORTHO05D005580 1.2e-105 387.5 280 74.6
BcaB07g33630 Brassica carinata HOM05D004764 ORTHO05D005580 1.6e-105 387.1 305 69.5
Zm00001eb429110 Zea mays HOM05D004764 ORTHO05D005580 1.6e-105 387.1 320 66.6
CsaV3_6G001590 Cucumis sativus L. HOM05D004764 ORTHO05D005580 2.7e-105 386.3 293 71.3
Lsat_1_v5_gn_9_12660 Lactuca sativa HOM05D004764 ORTHO05D005580 1.0e-104 384.4 317 63.7
Nitab4.5_0011923g0010 Nicotiana tabacum HOM05D004764 ORTHO05D005580 1.1e-101 374.4 318 67.3
BcaC08g43344 Brassica carinata HOM05D004764 ORTHO05D005580 9.1e-101 371.3 294 68.4
C06p07040 Brassica napus HOM05D004764 ORTHO05D005580 1.2e-100 370.9 294 68.4
Haze_20561 Corylus avellana HOM05D004764 ORTHO05D005580 3.8e-99 365.9 270 70.7
Nitab4.5_0002828g0150 Nicotiana tabacum HOM05D004764 ORTHO05D005580 8.5e-99 364.8 391 58.6
ATR0736G027 Amborella trichopoda HOM05D004764 ORTHO05D005580 1.1e-98 364.4 322 62.1
Sabra10G0149400 Salix brachista HOM05D004764 ORTHO05D005580 1.1e-98 364.4 285 66.7
Lj1C433T7 Lonicera japonica HOM05D004764 ORTHO05D005580 9.4e-98 361.3 256 73.0
Sc11g0007530 Simmondsia chinensis HOM05D004764 ORTHO05D005580 4.7e-97 359.0 270 68.9
AUR62041843 Chenopodium quinoa HOM05D004764 ORTHO05D005580 1.1e-93 347.8 318 61.3
FAN06G0806 Fragaria x ananassa HOM05D004764 ORTHO05D005580 1.1e-93 347.8 264 70.1
SHI03532 Sapria himalayana HOM05D004764 ORTHO05D005580 1.4e-93 347.4 319 61.1
Nn5g27977 Nelumbo nucifera HOM05D004764 ORTHO05D005580 1.6e-92 344.0 318 64.2
Glyma.07G091000 Glycine max HOM05D004764 ORTHO05D005580 1.3e-91 340.9 318 61.9
SEGI_31890 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 3.2e-90 336.3 320 57.8
AUR62032348 Chenopodium quinoa HOM05D004764 ORTHO05D005580 3.6e-89 332.8 270 64.8
Lj1C435T9 Lonicera japonica HOM05D004764 ORTHO05D005580 3.4e-87 326.2 242 69.8
vmacro10073 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 1.2e-84 317.8 230 73.9
HPP92_027811 Vanilla planifolia HOM05D004764 ORTHO05D005580 8.0e-81 305.1 318 56.0
Potri.008G063100 Populus trichocarpa HOM05D004764 ORTHO05D005580 7.8e-76 288.5 227 64.8
Mapoly0024s0083 Marchantia polymorpha HOM05D004764 ORTHO05D005580 3.7e-70 269.6 321 50.8
TPR.G27934 Trifolium pratense HOM05D004764 ORTHO05D005580 3.7e-70 269.6 748 31.3
SMO356G0668 Selaginella moellendorffii HOM05D004764 ORTHO05D005580 1.1e-66 258.1 316 50.0
Pp3c6_24680 Physcomitrium patens HOM05D004764 ORTHO05D005580 8.9e-64 248.4 320 45.0
Oeu032670.1 Olea europaea HOM05D004764 ORTHO05D005580 3.5e-60 236.5 181 77.3
AagrBONN_evm.TU.Sc2ySwM_368.928 Anthoceros agrestis HOM05D004764 ORTHO05D005580 6.8e-56 222.2 295 46.1
PGSC0003DMG400022548 Solanum tuberosum HOM05D004764 ORTHO05D005580 2.2e-54 217.2 125 96.0
CDE09G0086 Ceratophyllum demersum HOM05D004764 ORTHO05D005580 3.9e-51 206.5 192 63.5
Actinidia27825 Actinidia chinensis HOM05D004764 ORTHO05D005580 1.8e-48 197.6 150 74.0
Zm00001eb427200 Zea mays HOM05D004764 ORTHO05D005580 2.6e-47 193.7 160 70.6
C06p13300 Brassica napus HOM05D001194 ORTHO05D005580 3.5e-44 183.3 255 49.0
Glyma.17G199500 Glycine max HOM05D004764 ORTHO05D005580 2.0e-39 167.5 120 79.2
PSO339G3467 Papaver somniferum HOM05D004764 ORTHO05D005580 1.4e-37 161.4 151 62.9
Sabra08G0046500 Salix brachista HOM05D004764 ORTHO05D005580 3.0e-35 153.7 252 40.5
HPP92_004405 Vanilla planifolia HOM05D004764 ORTHO05D005580 1.9e-34 151.0 121 62.0
BolC6t36490H Brassica oleracea HOM05D001194 ORTHO05D000015 5.3e-32 142.9 256 41.8
MCO05G144 Micromonas commoda HOM05D004764 ORTHO05D005580 3.8e-30 136.7 311 32.5
Eucgr.L03566 Eucalyptus grandis HOM05D004764 ORTHO05D005580 7.1e-29 132.5 91 72.5
vmacro10074 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 7.1e-29 132.5 112 64.3
CBR_g29687 Chara braunii HOM05D004764 ORTHO05D005580 1.6e-25 121.3 93 69.9
BcaC08g43936 Brassica carinata HOM05D004764 ORTHO05D005580 2.4e-24 117.5 99 60.6
BcaC08g43937 Brassica carinata HOM05D001194 ORTHO05D004786 2.4e-24 117.5 133 56.4
vmacro10891 Vaccinium macrocarpon HOM05D004764 ORTHO05D005580 5.3e-24 116.3 153 53.6
Actinidia13909 Actinidia chinensis HOM05D004764 ORTHO05D005580 1.7e-22 111.3 109 60.6
SEGI_41058 Sequoiadendron giganteum HOM05D004764 ORTHO05D005580 9.3e-21 105.5 89 57.3
Actinidia13908 Actinidia chinensis HOM05D004764 ORTHO05D005580 1.2e-15 88.6 68 64.7
Cre17.g711450 Chlamydomonas reinhardtii HOM05D004764 ORTHO05D005580 1.7e-14 84.7 397 26.4
Ah.16g102910 Amaranthus hybridus HOM05D004764 ORTHO05D005580 6.5e-14 82.8 57 73.7
Sc11g0007520 Simmondsia chinensis HOM05D004764 ORTHO05D005580 8.2e-09 65.9 92 45.7
PRCOL_00004763 Prasinoderma coloniale HOM05D001748 ORTHO05D001759 1.8e-08 64.7 126 35.7
HanXRQChr16g0528961 Helianthus annuus HOM05D004764 ORTHO05D005580 5.9e-07 59.7 95 41.1
BraA05t20843Z Brassica rapa HOM05D000051 ORTHO05D000015 1.7e-06 58.2 42 61.9


User provided reference genes

Program Settings