Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2148.2 Capsicum annuum HOM05D004263 ORTHO05D004931 2.7e-200 701.8 358 100.0
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 2.6e-118 429.5 268 86.2
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 5.7e-118 428.3 268 85.8
Nitab4.5_0001514g0010 Nicotiana tabacum HOM05D004263 ORTHO05D004931 5.3e-116 421.8 266 84.6
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 3.2e-113 412.5 268 83.2
Nitab4.5_0000025g0490 Nicotiana tabacum HOM05D004263 ORTHO05D004931 9.4e-113 411.0 298 75.8
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 8.2e-109 397.9 267 78.3
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.7e-106 390.2 268 74.6
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.7e-106 390.2 267 75.7
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 3.8e-106 389.0 267 77.2
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 6.5e-106 388.3 268 75.7
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 1.1e-105 387.5 274 73.7
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 1.5e-105 387.1 268 74.3
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 1.9e-105 386.7 269 76.2
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 1.9e-105 386.7 268 74.6
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 2.5e-105 386.3 268 74.6
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 2.5e-105 386.3 268 76.5
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 2.5e-105 386.3 268 74.6
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 3.2e-105 386.0 268 74.3
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 3.2e-105 386.0 269 75.1
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 7.2e-105 384.8 268 75.0
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 9.4e-105 384.4 268 75.0
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 9.4e-105 384.4 268 73.5
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 1.6e-104 383.6 268 73.5
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 1.6e-104 383.6 268 74.3
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.6e-104 383.6 268 74.3
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.6e-104 383.6 268 74.3
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.6e-104 383.6 268 74.3
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 2.1e-104 383.3 268 72.8
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 2.7e-104 382.9 267 74.9
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 4.7e-104 382.1 268 75.0
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 6.1e-104 381.7 268 74.3
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 8.0e-104 381.3 268 73.1
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 8.0e-104 381.3 268 72.8
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 1.0e-103 380.9 266 73.3
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 1.4e-103 380.6 268 73.1
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 2.3e-103 379.8 268 73.5
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 2.3e-103 379.8 268 74.3
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 2.3e-103 379.8 269 73.2
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 3.0e-103 379.4 277 72.9
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 3.0e-103 379.4 268 74.3
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 3.0e-103 379.4 274 72.6
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 3.0e-103 379.4 268 73.5
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 4.0e-103 379.0 268 73.9
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 4.0e-103 379.0 267 74.9
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 5.2e-103 378.6 268 73.9
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 5.2e-103 378.6 268 73.9
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 5.2e-103 378.6 267 74.5
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 5.2e-103 378.6 268 73.1
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 5.2e-103 378.6 268 72.8
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 6.8e-103 378.3 268 73.9
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 1.2e-102 377.5 268 72.8
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 1.5e-102 377.1 268 73.5
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 1.5e-102 377.1 268 73.9
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 1.5e-102 377.1 268 72.4
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 2.0e-102 376.7 268 72.8
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 2.6e-102 376.3 268 72.4
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 2.6e-102 376.3 268 73.9
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 3.4e-102 375.9 268 73.5
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 3.4e-102 375.9 268 73.9
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 3.4e-102 375.9 268 72.0
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 7.5e-102 374.8 268 73.5
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 9.8e-102 374.4 268 73.1
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 2.8e-101 372.9 268 73.1
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 2.8e-101 372.9 268 73.1
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 3.7e-101 372.5 268 72.8
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 6.3e-101 371.7 267 73.4
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 6.3e-101 371.7 268 71.6
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 8.3e-101 371.3 270 71.1
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 1.4e-100 370.5 268 70.9
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 1.4e-100 370.5 268 72.8
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.4e-100 370.5 267 73.8
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.8e-100 370.2 268 71.3
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 1.8e-100 370.2 268 71.6
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 2.4e-100 369.8 268 72.4
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 2.4e-100 369.8 268 70.9
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 3.1e-100 369.4 268 72.0
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 3.1e-100 369.4 268 71.6
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 4.1e-100 369.0 268 71.3
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 5.4e-100 368.6 268 72.0
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 5.4e-100 368.6 268 72.0
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 1.6e-99 367.1 286 67.8
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 1.6e-99 367.1 286 67.8
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 1.6e-99 367.1 268 71.6
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 2.0e-99 366.7 268 73.1
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 2.0e-99 366.7 268 71.3
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 2.0e-99 366.7 268 71.3
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 2.0e-99 366.7 268 69.4
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 4.5e-99 365.5 268 72.0
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 1.0e-98 364.4 298 67.1
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 3.8e-98 362.5 268 72.4
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 6.5e-98 361.7 268 72.8
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 6.5e-98 361.7 268 69.4
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 8.6e-98 361.3 268 70.9
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 9.5e-97 357.8 268 71.6
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 9.5e-97 357.8 268 72.8
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 1.6e-96 357.1 290 67.6
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 4.7e-96 355.5 306 62.7
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 8.0e-96 354.8 268 69.4
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 2.3e-95 353.2 306 62.4
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 5.7e-94 348.6 274 65.3
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 5.4e-92 342.0 274 66.4
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 2.3e-90 336.7 274 65.3
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 4.3e-89 332.4 268 66.4
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 2.1e-88 330.1 268 66.4
SHI10474 Sapria himalayana HOM05D004263 ORTHO05D004931 2.8e-88 329.7 260 64.2
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 8.0e-88 328.2 268 67.9
QL08p037237 Quercus lobata HOM05D004263 ORTHO05D004931 5.2e-87 325.5 303 60.1
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 3.4e-86 322.8 268 67.2
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 4.4e-86 322.4 265 66.0
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.9e-85 319.7 291 63.2
TPR.G26159 Trifolium pratense HOM05D004263 ORTHO05D004931 2.9e-85 319.7 240 69.6
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 4.3e-81 305.8 309 55.3
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 6.4e-77 292.0 268 58.6
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 1.9e-76 290.4 275 55.6
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 3.0e-74 283.1 276 54.7
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 1.7e-66 257.3 278 50.7
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 1.3e-58 231.1 166 72.9
CSS0002414 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.3e-42 177.2 196 55.1
VMungo1080G0385 Vigna mungo HOM05D004263 ORTHO05D004931 4.3e-41 172.9 110 76.4
CAN.G224.17 Capsicum annuum HOM05D004263 ORTHO05D004931 8.2e-32 142.1 83 88.0
PRCOL_00001544 Prasinoderma coloniale HOM05D004263 ORTHO05D004931 1.6e-27 127.9 282 31.6
Oeu001695.1 Olea europaea HOM05D004263 ORTHO05D004931 1.1e-25 121.7 74 81.1
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 1.1e-23 115.2 269 28.6
SEGI_10945 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 6.9e-23 112.5 81 65.4
SEGI_22414 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 1.0e-21 108.6 137 48.9
SEGI_06467 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 1.3e-21 108.2 120 53.3
CBR_g40703 Chara braunii HOM05D004263 ORTHO05D004931 2.1e-19 100.9 82 63.4
Dinv23715 Davidia involucrata HOM05D004263 ORTHO05D004931 4.3e-17 93.2 54 83.3
CBR_g40701 Chara braunii HOM05D004263 ORTHO05D004931 3.7e-16 90.1 117 46.2
MD02G1222100 Malus domestica HOM05D004263 ORTHO05D004931 7.7e-14 82.4 52 76.9
Cre07.g328550 Chlamydomonas reinhardtii HOM05D004263 ORTHO05D004931 1.0e-13 82.0 358 25.1
Manes.13G151750 Manihot esculenta HOM05D004263 ORTHO05D004931 9.4e-12 75.5 158 33.5
Glyma.08G214950 Glycine max HOM05D004263 ORTHO05D004931 2.2e-08 64.3 61 57.4


User provided reference genes

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