Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.7e-257 892.1 436 100.0
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 5.7e-229 797.3 415 93.5
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 7.4e-229 797.0 415 93.3
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.0e-210 735.7 415 86.5
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 5.9e-210 734.2 415 82.9
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 4.2e-208 728.0 415 86.3
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 8.8e-206 720.3 421 79.8
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 3.4e-205 718.4 415 81.7
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 9.8e-205 716.8 415 80.5
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 3.7e-204 714.9 421 79.3
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.8e-203 712.6 421 79.1
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 1.2e-202 709.9 415 80.7
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.7e-202 708.8 421 78.6
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 2.5e-200 702.2 417 79.4
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 1.6e-199 699.5 409 78.7
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 2.8e-199 698.7 412 78.4
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 6.1e-199 697.6 415 76.9
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.4e-198 696.4 422 78.2
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.8e-198 696.0 415 76.9
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.8e-198 696.0 424 76.7
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 4.0e-198 694.9 421 77.7
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.2e-198 694.5 461 76.4
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 6.8e-198 694.1 415 77.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 8.9e-198 693.7 410 78.3
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 2.0e-197 692.6 415 78.1
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 2.6e-197 692.2 421 76.7
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 3.4e-197 691.8 419 76.6
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 4.4e-197 691.4 418 77.3
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 9.8e-197 690.3 440 75.0
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 6.3e-196 687.6 415 77.3
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 8.3e-196 687.2 421 75.8
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 4.1e-195 684.9 415 76.6
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 5.9e-194 681.0 421 74.8
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 1.3e-193 679.9 420 75.5
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 6.6e-193 677.6 410 76.1
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 6.6e-193 677.6 417 75.5
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 8.6e-193 677.2 415 75.2
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 8.6e-193 677.2 415 74.9
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.5e-192 676.4 415 74.7
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.3e-192 674.9 406 77.6
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 1.2e-191 673.3 412 76.0
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.6e-191 672.9 410 75.6
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.6e-191 672.9 416 74.0
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.8e-191 672.2 417 75.8
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 1.0e-190 670.2 416 73.6
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.0e-190 670.2 407 75.7
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.4e-190 669.8 419 75.4
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.8e-190 669.5 414 74.2
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 2.3e-190 669.1 415 74.9
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 2.3e-190 669.1 415 74.7
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 6.8e-190 667.5 421 73.6
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-189 666.4 414 74.2
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 2.0e-189 666.0 414 74.2
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.0e-189 666.0 414 74.2
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.0e-189 666.0 424 73.8
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 4.4e-189 664.8 414 73.4
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 7.5e-189 664.1 415 75.9
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 1.7e-188 662.9 414 73.9
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 2.2e-188 662.5 415 74.7
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 4.9e-188 661.4 395 77.2
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 8.3e-188 660.6 398 75.4
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 4.1e-187 658.3 406 73.9
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 5.4e-187 657.9 416 72.6
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 7.0e-187 657.5 415 74.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 1.2e-186 656.8 405 74.1
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.6e-186 656.4 426 72.5
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 3.5e-186 655.2 404 75.5
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.0e-185 653.7 414 73.2
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 8.6e-185 650.6 416 72.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 9.5e-184 647.1 430 71.9
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 9.5e-184 647.1 412 74.3
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 5.8e-181 637.9 545 59.1
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 7.5e-181 637.5 415 72.5
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 3.7e-180 635.2 412 70.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.1e-178 629.4 415 70.8
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.1e-178 629.4 410 71.2
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 1.1e-176 623.6 416 69.7
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.3e-176 622.1 410 71.7
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.3e-176 621.7 417 71.5
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.2e-175 620.2 399 72.2
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 8.1e-175 617.5 429 67.8
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 1.3e-169 600.1 459 63.8
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 9.5e-168 594.0 426 68.1
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.3e-164 583.6 404 67.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 9.6e-160 567.4 413 63.0
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 4.9e-156 555.1 412 65.3
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 1.1e-155 553.9 388 66.5
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 9.6e-152 540.8 373 70.0
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 1.6e-151 540.0 414 62.8
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 4.6e-146 521.9 363 68.0
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.3e-143 513.8 313 74.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 8.1e-143 511.1 387 66.9
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 3.4e-141 505.8 304 77.6
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 1.7e-132 476.9 415 60.5
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 1.0e-105 387.9 230 80.0
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.9e-92 343.2 200 80.0
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 4.2e-91 339.3 206 76.7
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 8.0e-90 335.1 350 43.7
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 1.3e-84 317.8 350 44.3
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 2.3e-84 317.0 378 41.3
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 3.4e-72 276.6 366 35.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 5.6e-59 232.6 282 41.1
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 2.9e-47 193.7 106 82.1
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 2.9e-39 167.2 103 71.8
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 4.6e-37 159.8 106 68.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 4.6e-37 159.8 106 68.9
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 7.9e-37 159.1 93 75.3
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 1.7e-36 157.9 103 68.9
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 3.1e-33 147.1 139 58.3
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 6.1e-13 79.7 50 70.0
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.9e-13 79.3 49 69.4
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.3e-12 77.8 49 69.4
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.6e-10 71.6 45 73.3
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 8.2e-10 69.3 48 64.6
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 2.6e-08 64.3 46 63.0


User provided reference genes

Program Settings