Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G21.49 Capsicum annuum HOM05D006934 ORTHO05D008743 1.7e-309 1065.1 516 100.0
Sopen08g022340 Solanum pennellii HOM05D006934 ORTHO05D008743 5.8e-273 943.7 515 88.5
Solyc08g068580.4 Solanum lycopersicum HOM05D006934 ORTHO05D008743 6.4e-272 940.3 515 88.0
Nitab4.5_0006202g0030 Nicotiana tabacum HOM05D006934 ORTHO05D008743 1.0e-269 932.9 515 87.8
PGSC0003DMG400029048 Solanum tuberosum HOM05D006934 ORTHO05D008743 3.8e-264 914.4 473 92.4
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 5.0e-248 860.9 461 88.9
Dinv11656 Davidia involucrata HOM05D006934 ORTHO05D008743 6.7e-237 823.9 518 76.3
Rhsim02G0213000 Rhododendron simsii HOM05D006934 ORTHO05D008743 8.2e-235 817.0 515 75.7
CSS0048576 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 4.5e-233 811.2 509 75.8
CSS0041678 Camellia sinensis var. sinensis HOM05D006934 ORTHO05D008743 5.9e-233 810.8 509 75.8
Hma1.2p1_0706F.1_g207020 Hydrangea macrophylla HOM05D006934 ORTHO05D008743 6.5e-232 807.4 511 75.7
Cc08_g06990 Coffea canephora HOM05D006934 ORTHO05D008743 5.5e-231 804.3 487 77.2
GSVIVG01035967001 Vitis vinifera HOM05D006934 ORTHO05D008743 2.6e-228 795.4 515 75.1
Haze_21418 Corylus avellana HOM05D006934 ORTHO05D008743 4.4e-228 794.7 516 73.1
Aqoxy5G03587 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 9.7e-228 793.5 511 74.0
Actinidia10522 Actinidia chinensis HOM05D006934 ORTHO05D008743 3.7e-227 791.6 518 73.6
Prupe.1G393700 Prunus persica HOM05D006934 ORTHO05D008743 5.3e-226 787.7 516 73.4
MD15G1040400 Malus domestica HOM05D006934 ORTHO05D008743 1.2e-225 786.6 503 73.8
Migut.A00351 Erythranthe guttata HOM05D006934 ORTHO05D008743 1.6e-225 786.2 516 73.6
MSTRG.25834 Avicennia marina HOM05D006934 ORTHO05D008743 1.0e-224 783.5 511 74.0
vmacro11241 Vaccinium macrocarpon HOM05D006934 ORTHO05D008743 1.7e-224 782.7 547 70.0
Manes.03G008700 Manihot esculenta HOM05D006934 ORTHO05D008743 1.1e-223 780.0 509 73.7
TAR626G1595 Trochodendron aralioides HOM05D006934 ORTHO05D008743 3.2e-223 778.5 513 72.3
Atru.chr7.2565 Acer truncatum HOM05D006934 ORTHO05D008743 1.4e-221 773.1 503 72.8
Cfa013059 Carpinus fangiana HOM05D006934 ORTHO05D008743 4.0e-221 771.5 503 72.8
Cpa.g.sc127.37 Carica papaya HOM05D006934 ORTHO05D008743 8.8e-221 770.4 507 71.4
Potri.018G018700 Populus trichocarpa HOM05D006934 ORTHO05D008743 1.2e-220 770.0 506 72.5
TWI34G0497 Tripterygium wilfordii HOM05D006934 ORTHO05D008743 1.2e-220 770.0 507 71.8
Ciclev10008002m.g Citrus clementina HOM05D006934 ORTHO05D008743 1.5e-220 769.6 507 72.2
ECA236G4849 Erigeron canadensis HOM05D006934 ORTHO05D008743 3.3e-220 768.5 492 73.6
Lalb_Chr23g0268221 Lupinus albus HOM05D006934 ORTHO05D008743 5.7e-220 767.7 504 70.4
RcHm_v2.0_Chr6g0299421 Rosa chinensis HOM05D006934 ORTHO05D008743 7.5e-220 767.3 491 73.9
PGR044G1250 Punica granatum HOM05D006934 ORTHO05D008743 1.3e-219 766.5 490 74.5
FvH4_2g41120 Fragaria vesca HOM05D006934 ORTHO05D008743 1.7e-219 766.1 510 71.8
Eucgr.C02612 Eucalyptus grandis HOM05D006934 ORTHO05D008743 2.2e-219 765.8 487 74.3
HanXRQChr06g0176741 Helianthus annuus HOM05D006934 ORTHO05D008743 1.4e-218 763.1 516 70.7
AUR62032410 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.1e-218 761.9 508 71.9
Sabra18G0021400 Salix brachista HOM05D006934 ORTHO05D008743 4.1e-218 761.5 506 71.9
Psat5g033000 Pisum sativum HOM05D006934 ORTHO05D008743 5.3e-218 761.1 499 71.5
Lsat_1_v5_gn_8_82201 Lactuca sativa HOM05D006934 ORTHO05D008743 1.6e-217 759.6 521 70.1
CANSAT25G0127 Cannabis sativa HOM05D006934 ORTHO05D008743 2.0e-217 759.2 512 70.7
Duzib168G1051 Durio zibethinus HOM05D006934 ORTHO05D008743 2.7e-217 758.8 507 71.6
Thecc.09G015800 Theobroma cacao HOM05D006934 ORTHO05D008743 2.7e-217 758.8 508 71.5
MBI15_g19327_MAGBIO Magnolia biondii HOM05D006934 ORTHO05D008743 3.5e-217 758.4 503 70.8
Gorai.001G038100 Gossypium raimondii HOM05D006934 ORTHO05D008743 1.3e-216 756.5 508 70.7
EL10Ac2g02505 Beta vulgaris HOM05D006934 ORTHO05D008743 1.7e-216 756.1 517 69.6
FAN27G3133 Fragaria x ananassa HOM05D006934 ORTHO05D008743 2.2e-216 755.7 504 72.0
AUR62024810 Chenopodium quinoa HOM05D006934 ORTHO05D008743 3.8e-216 755.0 517 69.6
Gohir.D07G036200 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.1e-215 753.4 508 70.5
COL.COLO4_18949 Corchorus olitorius HOM05D006934 ORTHO05D008743 1.5e-215 753.1 509 70.5
Phvul.009G087000 Phaseolus vulgaris HOM05D006934 ORTHO05D008743 3.2e-215 751.9 501 69.9
Lj1g0027414 Lotus japonicus HOM05D006934 ORTHO05D008743 4.2e-215 751.5 514 69.8
Ca_15778_v3 Cicer arietinum L. HOM05D006934 ORTHO05D008743 5.5e-215 751.1 497 70.4
Eucgr.C02611 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.5e-215 751.1 501 71.1
TPR.G1832 Trifolium pratense HOM05D006934 ORTHO05D008743 1.2e-214 750.0 503 69.6
QL02p018881 Quercus lobata HOM05D006934 ORTHO05D008743 3.6e-214 748.4 512 69.5
unitig_32.g11664 Utricularia gibba HOM05D006934 ORTHO05D008743 4.7e-214 748.0 482 71.4
VMungo1309G2247 Vigna mungo HOM05D006934 ORTHO05D008743 6.1e-214 747.7 486 72.0
arahy.Tifrunner.gnm1.ann1.XZ9AUI Arachis hypogaea HOM05D006934 ORTHO05D008743 1.8e-213 746.1 510 69.2
Eucgr.C02525 Eucalyptus grandis HOM05D006934 ORTHO05D008743 3.0e-213 745.3 501 70.5
Glyma.06G061500 Glycine max HOM05D006934 ORTHO05D008743 6.8e-213 744.2 504 69.4
Medtr3g105980 Medicago truncatula HOM05D006934 ORTHO05D008743 1.2e-212 743.4 513 68.8
Glyma.04G060900 Glycine max HOM05D006934 ORTHO05D008743 2.6e-212 742.3 504 69.2
ATR0739G024 Amborella trichopoda HOM05D006934 ORTHO05D008743 5.7e-212 741.1 500 70.8
Hund02990 Selenicereus undatus HOM05D006934 ORTHO05D008743 5.7e-212 741.1 510 70.2
Os06g0649900 Oryza sativa ssp. japonica HOM05D006934 ORTHO05D008743 1.6e-209 733.0 478 71.1
CDE02G1998 Ceratophyllum demersum HOM05D006934 ORTHO05D008743 2.7e-209 732.3 483 70.4
Lj7C734G21 Lonicera japonica HOM05D006934 ORTHO05D008743 2.7e-209 732.3 456 75.0
PSO017G3817 Papaver somniferum HOM05D006934 ORTHO05D008743 6.5e-208 727.6 509 68.2
Eucgr.C02526 Eucalyptus grandis HOM05D006934 ORTHO05D008743 5.5e-207 724.5 478 72.4
BcaNung03200 Brassica carinata HOM05D006934 ORTHO05D008743 2.3e-205 719.2 507 67.7
Gorai.010G118800 Gossypium raimondii HOM05D006934 ORTHO05D008743 3.0e-205 718.8 508 68.1
PSO170G6733 Papaver somniferum HOM05D006934 ORTHO05D008743 6.8e-205 717.6 509 67.6
Sp2g22420 Schrenkiella parvula HOM05D006934 ORTHO05D008743 2.6e-204 715.7 496 69.0
Gohir.D06G103800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.2e-203 712.6 508 67.7
Ah.12g060980 Amaranthus hybridus HOM05D006934 ORTHO05D008743 4.9e-203 711.4 461 72.9
HPP92_004696 Vanilla planifolia HOM05D006934 ORTHO05D008743 1.4e-202 709.9 507 66.9
BraA06t26511Z Brassica rapa HOM05D006934 ORTHO05D008743 1.8e-202 709.5 494 68.6
CiPaw.07G230200 Carya illinoinensis HOM05D006934 ORTHO05D008743 4.1e-202 708.4 469 71.4
THA.LOC104799020 Tarenaya hassleriana HOM05D006934 ORTHO05D008743 1.6e-201 706.4 517 66.0
C07p42720 Brassica napus HOM05D006934 ORTHO05D008743 3.5e-201 705.3 494 68.2
BcaNung02296 Brassica carinata HOM05D006934 ORTHO05D008743 4.5e-201 704.9 494 68.0
BolC7t44802H Brassica oleracea HOM05D006934 ORTHO05D008743 4.5e-201 704.9 494 68.0
Aqoxy2G03820 Aquilegia oxysepala HOM05D006934 ORTHO05D008743 5.9e-201 704.5 514 66.9
AL6G36750 Arabidopsis lyrata HOM05D006934 ORTHO05D008743 1.3e-200 703.4 500 67.8
Sed0006653 Sechium edule HOM05D006934 ORTHO05D008743 2.5e-199 699.1 506 65.8
Aa31LG11G4330 Aethionema arabicum HOM05D006934 ORTHO05D008743 3.3e-199 698.7 497 67.2
CsaV3_4G036540 Cucumis sativus L. HOM05D006934 ORTHO05D008743 2.8e-198 695.7 513 65.1
SEGI_09290 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 1.0e-197 693.7 495 65.7
MELO3C016958.2 Cucumis melo HOM05D006934 ORTHO05D008743 4.0e-197 691.8 519 64.5
A06p35860 Brassica napus HOM05D006934 ORTHO05D008743 2.4e-194 682.6 541 62.8
ClCG05G016280 Citrullus lanatus HOM05D006934 ORTHO05D008743 9.5e-191 670.6 541 61.4
Nn2g12390 Nelumbo nucifera HOM05D006934 ORTHO05D008743 6.8e-189 664.5 487 66.1
BcaNung06716 Brassica carinata HOM05D006934 ORTHO05D008743 2.2e-187 659.4 482 66.0
arahy.Tifrunner.gnm1.ann1.G1SIKM Arachis hypogaea HOM05D006934 ORTHO05D008743 2.6e-172 609.4 510 59.8
Pp3c3_35450 Physcomitrium patens HOM05D006934 ORTHO05D008743 1.9e-170 603.2 510 56.7
Peaxi162Scf00822g00212 Petunia axillaris HOM05D006934 ORTHO05D008743 4.1e-170 602.1 368 79.6
Thhalv10004366m.g Eutrema salsugineum HOM05D006934 ORTHO05D008743 2.3e-160 569.7 395 70.9
CARHR188390 Cardamine hirsuta HOM05D006934 ORTHO05D008743 7.4e-151 538.1 371 69.5
Sc09g0010640 Simmondsia chinensis HOM05D006934 ORTHO05D008743 8.1e-150 534.6 340 74.7
Nn8g39897 Nelumbo nucifera HOM05D006934 ORTHO05D008743 1.9e-135 486.9 361 63.2
Eucgr.C02635 Eucalyptus grandis HOM05D006934 ORTHO05D008743 1.3e-118 431.0 498 49.2
Gohir.A07G032950 Gossypium hirsutum HOM05D006934 ORTHO05D008743 7.7e-116 421.8 300 65.3
Gohir.A06G101800 Gossypium hirsutum HOM05D006934 ORTHO05D008743 1.4e-112 411.0 310 61.9
Zm00001eb275030 Zea mays HOM05D006934 ORTHO05D008743 4.8e-102 375.9 249 66.7
Zm00001eb334470 Zea mays HOM05D006934 ORTHO05D008743 2.7e-92 343.6 214 69.2
QL02p018870 Quercus lobata HOM05D006934 ORTHO05D008743 6.2e-73 279.3 186 67.7
Gohir.A06G101702 Gossypium hirsutum HOM05D006934 ORTHO05D008743 2.9e-70 270.4 179 76.0
Zm00001eb337170 Zea mays HOM05D006934 ORTHO05D008743 3.4e-63 246.9 148 73.0
SGA_v2.0_scaffold22G09909 Striga asiatica HOM05D006934 ORTHO05D008743 1.7e-62 244.6 168 69.6
Lsat_1_v5_gn_5_171641 Lactuca sativa HOM05D006934 ORTHO05D008743 4.0e-24 117.1 104 60.6
Cfa012861 Carpinus fangiana HOM05D006934 ORTHO05D008743 6.9e-16 89.7 53 66.0
Lsat_1_v5_gn_2_108800 Lactuca sativa HOM05D006934 ORTHO05D003550 7.2e-13 79.7 79 51.9
SEGI_28803 Sequoiadendron giganteum HOM05D006934 ORTHO05D008743 7.2e-13 79.7 77 53.2
Oeu030220.2 Olea europaea HOM05D006934 ORTHO05D008743 8.5e-06 56.2 44 59.1


User provided reference genes

Program Settings