Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G21.48 Capsicum annuum HOM05D007122 ORTHO05D008918 2.8e-149 531.9 275 100.0
Sopen08g022350 Solanum pennellii HOM05D007122 ORTHO05D008918 6.1e-136 487.6 271 90.8
Solyc08g068590.4 Solanum lycopersicum HOM05D007122 ORTHO05D008918 1.7e-133 479.6 273 88.6
PGSC0003DMG400029047 Solanum tuberosum HOM05D007122 ORTHO05D008918 4.1e-132 474.9 301 81.7
Nitab4.5_0006202g0020 Nicotiana tabacum HOM05D007122 ORTHO05D008918 5.9e-131 471.1 273 89.4
Peaxi162Scf00822g00313 Petunia axillaris HOM05D007122 ORTHO05D008918 9.4e-129 463.8 272 86.4
Nitab4.5_0000406g0060 Nicotiana tabacum HOM05D006934 ORTHO05D008743 2.3e-103 379.4 215 89.8
Cc02_g30330 Coffea canephora HOM05D007122 ORTHO05D008918 1.6e-99 366.7 264 68.9
CiPaw.01G090900 Carya illinoinensis HOM05D007122 ORTHO05D008918 1.8e-95 353.2 280 64.6
TAR629G1569 Trochodendron aralioides HOM05D007122 ORTHO05D008918 6.8e-95 351.3 257 69.3
QL05p084392 Quercus lobata HOM05D007122 ORTHO05D008918 8.9e-95 350.9 257 67.7
Sp4g28930 Schrenkiella parvula HOM05D007122 ORTHO05D008918 5.8e-94 348.2 246 70.3
AT2G46910 Arabidopsis thaliana HOM05D007122 ORTHO05D008918 9.8e-94 347.4 273 65.2
Atru.chr5.816 Acer truncatum HOM05D007122 ORTHO05D008918 1.7e-93 346.7 227 74.4
Nn1g00501 Nelumbo nucifera HOM05D007122 ORTHO05D008918 1.7e-93 346.7 243 71.6
Carub.0004s2963 Capsella rubella HOM05D007122 ORTHO05D008918 2.2e-93 346.3 274 64.2
MBI12_g33188_MAGBIO Magnolia biondii HOM05D007122 ORTHO05D008918 2.9e-93 345.9 224 74.6
TWI59G0863 Tripterygium wilfordii HOM05D007122 ORTHO05D008918 2.9e-93 345.9 271 65.7
Thhalv10001577m.g Eutrema salsugineum HOM05D007122 ORTHO05D008918 3.7e-93 345.5 246 69.5
Potri.002G183700 Populus trichocarpa HOM05D007122 ORTHO05D008918 3.7e-93 345.5 265 67.2
PSO782G5442 Papaver somniferum HOM05D007122 ORTHO05D008918 6.4e-93 344.7 269 66.2
MSTRG.12208 Avicennia marina HOM05D007122 ORTHO05D008918 1.4e-92 343.6 272 65.4
CARHR142260 Cardamine hirsuta HOM05D007122 ORTHO05D008918 2.4e-92 342.8 231 72.7
EL10Ac5g10570 Beta vulgaris HOM05D007122 ORTHO05D008918 4.1e-92 342.0 228 74.6
CANSAT01G1971 Cannabis sativa HOM05D007122 ORTHO05D008918 5.4e-92 341.7 247 68.0
AUR62028625 Chenopodium quinoa HOM05D007122 ORTHO05D008918 5.4e-92 341.7 261 67.0
A05p00930 Brassica napus HOM05D007122 ORTHO05D008918 7.0e-92 341.3 246 67.9
GSVIVG01027487001 Vitis vinifera HOM05D007122 ORTHO05D008918 9.2e-92 340.9 255 68.6
Lj3g0016159 Lotus japonicus HOM05D007122 ORTHO05D008918 1.6e-91 340.1 234 70.9
Prupe.3G022800 Prunus persica HOM05D007122 ORTHO05D008918 2.0e-91 339.7 262 65.6
RcHm_v2.0_Chr2g0149531 Rosa chinensis HOM05D007122 ORTHO05D008918 2.0e-91 339.7 243 70.0
Cpa.g.sc57.60 Carica papaya HOM05D007122 ORTHO05D008918 2.7e-91 339.3 240 72.5
Oeu050289.1 Olea europaea HOM05D007122 ORTHO05D008918 4.6e-91 338.6 277 62.8
BcaC02g12634 Brassica carinata HOM05D007122 ORTHO05D008918 6.0e-91 338.2 271 64.2
Phvul.010G164100 Phaseolus vulgaris HOM05D007122 ORTHO05D008918 6.0e-91 338.2 224 72.3
MD17G1162500 Malus domestica HOM05D007122 ORTHO05D008918 1.0e-90 337.4 241 68.9
BraA05t19094Z Brassica rapa HOM05D007122 ORTHO05D008918 1.3e-90 337.0 247 67.6
AUR62008050 Chenopodium quinoa HOM05D007122 ORTHO05D008918 1.3e-90 337.0 225 73.3
Gohir.D11G107500 Gossypium hirsutum HOM05D007122 ORTHO05D008918 1.7e-90 336.7 229 72.5
Gorai.007G115100 Gossypium raimondii HOM05D007122 ORTHO05D008918 1.7e-90 336.7 234 71.4
COL.COLO4_23084 Corchorus olitorius HOM05D007122 ORTHO05D008918 2.3e-90 336.3 227 73.6
Medtr4g005390 Medicago truncatula HOM05D007122 ORTHO05D008918 3.9e-90 335.5 255 66.3
Aa31LG1G28270 Aethionema arabicum HOM05D007122 ORTHO05D008918 5.6e-89 331.6 266 65.4
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea HOM05D007122 ORTHO05D008918 5.6e-89 331.6 235 69.4
C04p01080 Brassica napus HOM05D006867 ORTHO05D008676 7.3e-89 331.3 237 69.2
FAN05G3936 Fragaria x ananassa HOM05D007122 ORTHO05D008918 7.3e-89 331.3 243 68.7
Thecc.01G329100 Theobroma cacao HOM05D007122 ORTHO05D008918 7.3e-89 331.3 229 71.6
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea HOM05D007122 ORTHO05D008918 9.5e-89 330.9 235 68.9
FAN14G1589 Fragaria x ananassa HOM05D007122 ORTHO05D008918 9.5e-89 330.9 243 68.3
FvH4_6g36990 Fragaria vesca HOM05D007122 ORTHO05D008918 2.1e-88 329.7 243 68.3
Glyma.07G002100 Glycine max HOM05D007122 ORTHO05D008918 2.1e-88 329.7 238 68.1
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 2.1e-88 329.7 243 69.5
Lj9A610T61 Lonicera japonica HOM05D007122 ORTHO05D008918 2.1e-88 329.7 228 74.6
Ca_20970_v3 Cicer arietinum L. HOM05D007122 ORTHO05D008918 6.2e-88 328.2 248 65.3
THA.LOC104802109 Tarenaya hassleriana HOM05D007122 ORTHO05D008918 1.1e-87 327.4 284 61.3
Lalb_Chr04g0264851 Lupinus albus HOM05D007122 ORTHO05D008918 8.9e-87 324.3 232 66.8
Hund02816 Selenicereus undatus HOM05D007122 ORTHO05D008918 2.0e-86 323.2 226 72.6
TPR.G38811 Trifolium pratense HOM05D007122 ORTHO05D008918 2.0e-86 323.2 229 69.4
Eucgr.E00013 Eucalyptus grandis HOM05D007122 ORTHO05D008918 2.6e-86 322.8 239 68.2
HPP92_007409 Vanilla planifolia HOM05D007122 ORTHO05D008918 2.6e-86 322.8 255 65.1
Ciclev10021604m.g Citrus clementina HOM05D007122 ORTHO05D008918 4.4e-86 322.0 264 64.0
HanXRQChr16g0524441 Helianthus annuus HOM05D007122 ORTHO05D008918 4.4e-86 322.0 243 67.5
ClCG07G014660 Citrullus lanatus HOM05D007122 ORTHO05D008918 3.7e-85 318.9 242 66.5
CsaV3_3G030490 Cucumis sativus L. HOM05D007122 ORTHO05D008918 4.9e-85 318.5 242 67.8
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 6.4e-85 318.2 221 73.3
CDE02G4652 Ceratophyllum demersum HOM05D007122 ORTHO05D008918 3.2e-84 315.8 244 67.6
MELO3C026712.2 Cucumis melo HOM05D007122 ORTHO05D008918 5.4e-84 315.1 245 66.1
ATR0579G047 Amborella trichopoda HOM05D007122 ORTHO05D008918 2.1e-83 313.2 261 60.2
unitig_0.g1006 Utricularia gibba HOM05D007122 ORTHO05D003998 1.3e-82 310.5 236 62.7
Actinidia33027 Actinidia chinensis HOM05D007122 ORTHO05D008918 1.7e-82 310.1 254 64.6
Zm00001eb220590 Zea mays HOM05D007122 ORTHO05D008918 7.3e-81 304.7 236 65.3
Os10g0509200 Oryza sativa ssp. japonica HOM05D007122 ORTHO05D008918 1.1e-79 300.8 277 57.8
Sabra02G0131900 Salix brachista HOM05D007122 ORTHO05D008918 1.5e-78 297.0 352 50.0
vmacro08515 Vaccinium macrocarpon HOM05D007122 ORTHO05D008918 2.0e-78 296.6 236 64.8
Rhsim04G0175900 Rhododendron simsii HOM05D007122 ORTHO05D008918 2.4e-76 289.7 259 58.3
Dinv25395 Davidia involucrata HOM05D007122 ORTHO05D008918 1.0e-74 284.3 254 61.0
Manes.01G237100 Manihot esculenta HOM05D007122 ORTHO05D008918 1.1e-73 280.8 224 63.4
VMungo0331G0463 Vigna mungo HOM05D000070 ORTHO05D003491 6.2e-72 275.0 229 60.3
Sed0017612 Sechium edule HOM05D007122 ORTHO05D008918 4.0e-71 272.3 190 70.5
Gohir.A11G103000 Gossypium hirsutum HOM05D007122 ORTHO05D008918 8.9e-71 271.2 182 73.6
PGR042G2951 Punica granatum HOM05D007122 ORTHO05D008918 1.2e-70 270.8 240 60.0
Lsat_1_v5_gn_4_31280 Lactuca sativa HOM05D007122 ORTHO05D008918 2.9e-69 266.2 217 65.0
Ah.11g050690 Amaranthus hybridus HOM05D007122 ORTHO05D008918 1.1e-68 264.2 261 55.2
Psat7g265240 Pisum sativum HOM05D007122 ORTHO05D008918 1.9e-68 263.5 194 64.4
Mapoly0069s0014 Marchantia polymorpha HOM05D007122 ORTHO05D008918 1.2e-67 260.8 247 55.1
SGA_v2.0_scaffold104G30244 Striga asiatica HOM05D007122 ORTHO05D008918 6.2e-64 248.4 269 50.6
SMO232G0083 Selaginella moellendorffii HOM05D007122 ORTHO05D008918 2.4e-63 246.5 240 53.8
Aqoxy5G04392 Aquilegia oxysepala HOM05D007122 ORTHO05D008918 9.0e-63 244.6 217 59.9
Dinv32665 Davidia involucrata HOM05D007122 ORTHO05D008918 1.1e-55 221.1 169 66.3
Duzib133G0914 Durio zibethinus HOM05D007122 ORTHO05D008918 1.1e-55 221.1 189 59.8
PSO063G7482 Papaver somniferum HOM05D007122 ORTHO05D008918 2.0e-54 216.9 148 72.3
Pp3c11_15290 Physcomitrium patens HOM05D007122 ORTHO05D008918 3.4e-54 216.1 283 43.1
Glyma.08G224600 Glycine max HOM05D007122 ORTHO05D008918 5.5e-52 208.8 152 66.4
Sc05g0001590 Simmondsia chinensis HOM05D007122 ORTHO05D008918 5.1e-50 202.2 157 63.7
Haze_16258 Corylus avellana HOM05D007122 ORTHO05D008918 2.5e-49 199.9 349 40.1
Migut.N02127 Erythranthe guttata HOM05D007122 ORTHO05D008918 1.6e-48 197.2 148 66.2
FAN02G0509 Fragaria x ananassa HOM05D007122 ORTHO05D008918 6.2e-48 195.3 199 53.8
Glyma.14G134000 Glycine max HOM05D007122 ORTHO05D008918 1.2e-46 191.0 166 56.6
QL05p083819 Quercus lobata HOM05D007122 ORTHO05D008918 9.7e-33 144.8 234 39.3
Pp3c2_10460 Physcomitrium patens HOM05D007122 ORTHO05D008918 7.7e-30 135.2 149 43.6
MCO07G119 Micromonas commoda HOM05D007122 ORTHO05D008918 5.5e-28 129.0 298 34.2
Zm00001eb094490 Zea mays HOM05D007122 ORTHO05D008918 2.1e-27 127.1 96 65.6
Cre01.g039550 Chlamydomonas reinhardtii HOM05D007122 ORTHO05D008918 3.6e-27 126.3 241 36.1
Psat7g265400 Pisum sativum HOM05D007122 ORTHO05D008918 3.9e-26 122.9 86 70.9
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla HOM05D007122 ORTHO05D008918 1.0e-18 98.2 60 80.0
SGA_v2.0_scaffold159G37569 Striga asiatica HOM05D007122 ORTHO05D008918 1.2e-11 74.7 114 38.6
FAN05G3242 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.1e-09 68.2 36 88.9
FAN14G0283 Fragaria x ananassa HOM05D007122 ORTHO05D008918 1.1e-09 68.2 36 88.9
FvH4_6g35960 Fragaria vesca HOM05D007122 ORTHO05D008918 5.7e-09 65.9 36 86.1
MSTRG.13126 Avicennia marina HOM05D002234 ORTHO05D002254 2.4e-07 60.5 241 22.4
SMO367G0795 Selaginella moellendorffii HOM05D002234 ORTHO05D002254 1.6e-06 57.8 244 25.4
COL.COLO4_31843 Corchorus olitorius HOM05D002234 ORTHO05D002254 2.7e-06 57.0 240 26.2
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 3.5e-06 56.6 218 25.7
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 3.5e-06 56.6 218 26.1
Cre14.g618050 Chlamydomonas reinhardtii HOM05D006988 ORTHO05D008731 3.5e-06 56.6 132 31.8
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 4.5e-06 56.2 218 25.7
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 5.9e-06 55.8 218 25.7


User provided reference genes

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