Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 7.0e-56 220.3 107 100.0
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.7e-36 154.5 107 69.2
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 6.2e-36 154.1 102 70.6
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.1e-35 153.3 102 69.6
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 4.0e-35 151.4 104 68.3
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 9.9e-34 146.7 104 66.3
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 7.1e-32 140.6 104 59.6
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 1.6e-31 139.4 103 62.1
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 3.0e-30 135.2 104 57.7
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 6.6e-30 134.0 107 56.1
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 6.6e-30 134.0 107 57.0
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.1e-29 133.3 101 57.4
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.1e-29 133.3 103 54.4
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.1e-29 133.3 103 54.4
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.5e-29 132.9 107 56.1
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.5e-29 132.9 107 56.1
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.9e-29 132.5 107 57.0
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.5e-29 132.1 107 55.1
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 3.3e-29 131.7 106 54.7
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 4.3e-29 131.3 102 55.9
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 5.6e-29 131.0 96 59.4
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 7.3e-29 130.6 101 58.4
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 7.3e-29 130.6 103 56.3
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 9.6e-29 130.2 101 53.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 1.3e-28 129.8 101 54.5
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.3e-28 129.8 104 51.9
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 1.6e-28 129.4 107 55.1
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.6e-28 129.4 105 56.2
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.6e-28 129.4 100 57.0
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.6e-28 129.4 107 54.2
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 2.1e-28 129.0 103 57.3
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 2.1e-28 129.0 103 55.3
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 4.8e-28 127.9 102 55.9
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 6.2e-28 127.5 105 56.2
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 6.2e-28 127.5 103 54.4
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 8.1e-28 127.1 108 53.7
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 8.1e-28 127.1 103 52.4
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-27 126.7 102 56.9
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 1.1e-27 126.7 102 56.9
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.1e-27 126.7 104 54.8
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-27 126.3 102 55.9
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.4e-27 126.3 100 54.0
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.4e-27 126.3 102 54.9
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 1.8e-27 125.9 103 54.4
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 2.4e-27 125.6 101 53.5
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 3.1e-27 125.2 106 51.9
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 3.1e-27 125.2 103 49.5
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 4.0e-27 124.8 106 51.9
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 4.0e-27 124.8 102 55.9
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 4.0e-27 124.8 108 52.8
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 4.0e-27 124.8 109 55.0
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 5.3e-27 124.4 106 50.9
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 5.3e-27 124.4 109 51.4
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 5.3e-27 124.4 104 51.9
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 6.9e-27 124.0 101 55.4
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 6.9e-27 124.0 108 51.9
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 9.0e-27 123.6 107 54.2
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 9.0e-27 123.6 102 52.9
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.2e-26 123.2 102 54.9
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 2.0e-26 122.5 102 52.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 3.4e-26 121.7 106 50.9
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 4.5e-26 121.3 106 47.2
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.5e-26 121.3 105 47.6
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 4.5e-26 121.3 104 54.8
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 4.5e-26 121.3 103 51.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 4.5e-26 121.3 102 52.9
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 5.8e-26 120.9 106 50.0
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 9.9e-26 120.2 103 55.3
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.3e-25 119.8 106 49.1
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 4.9e-25 117.9 95 51.6
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 4.9e-25 117.9 95 51.6
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 4.9e-25 117.9 95 51.6
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 4.9e-25 117.9 106 48.1
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 6.4e-25 117.5 107 53.3
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 6.4e-25 117.5 109 49.5
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.1e-24 116.7 111 52.3
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.9e-24 115.9 112 47.3
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.9e-24 115.9 111 47.7
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 4.2e-24 114.8 115 44.3
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 5.4e-24 114.4 109 46.8
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 5.4e-24 114.4 99 48.5
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 7.1e-24 114.0 104 48.1
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 9.3e-24 113.6 97 50.5
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.2e-23 113.2 94 52.1
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.2e-23 113.2 142 42.3
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 3.5e-23 111.7 113 45.1
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 3.5e-23 111.7 105 46.7
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 4.6e-23 111.3 102 47.1
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.0e-22 110.2 105 46.7
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 6.7e-22 107.5 102 46.1
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-21 106.7 102 45.1
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 1.1e-21 106.7 108 46.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 2.5e-21 105.5 97 47.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 4.3e-21 104.8 102 45.1
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 4.3e-21 104.8 102 45.1
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.6e-20 102.8 102 45.1
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.6e-20 102.8 108 47.2
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 1.4e-19 99.8 82 56.1
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 1.4e-19 99.8 83 53.0
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 3.1e-19 98.6 80 53.8
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 4.5e-18 94.7 68 60.3
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 7.6e-18 94.0 66 60.6
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 1.7e-17 92.8 80 50.0
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 3.8e-17 91.7 68 55.9
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 1.4e-16 89.7 82 53.7
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 4.6e-15 84.7 68 54.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 1.8e-14 82.8 95 41.1
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 6.7e-14 80.9 116 35.3
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 1.1e-13 80.1 64 53.1
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.7e-12 75.1 98 36.7
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 1.3e-09 66.6 82 40.2
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 1.7e-09 66.2 112 28.6
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 3.2e-08 62.0 58 41.4
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.6e-07 59.7 50 50.0
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 3.5e-07 58.5 67 38.8
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.0e-06 57.0 90 34.4
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 3.9e-06 55.1 52 44.2


User provided reference genes

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