Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G21.12 Capsicum annuum HOM05D005137 ORTHO05D006478 3.7e-82 308.1 156 100.0
CAN.G623.4 Capsicum annuum HOM05D005137 ORTHO05D006478 1.1e-44 183.7 102 94.1
Sopen08g021770 Solanum pennellii HOM05D005137 ORTHO05D006478 4.5e-43 178.3 98 93.9
PGSC0003DMG400033629 Solanum tuberosum HOM05D005137 ORTHO05D006478 4.5e-43 178.3 98 93.9
Solyc08g067830.3 Solanum lycopersicum HOM05D005137 ORTHO05D006478 1.3e-42 176.8 98 92.9
Peaxi162Scf00020g02234 Petunia axillaris HOM05D005137 ORTHO05D006478 5.5e-41 171.4 98 89.8
Nitab4.5_0000125g0160 Nicotiana tabacum HOM05D005137 ORTHO05D006478 9.7e-38 160.6 98 86.7
Manes.02G220500 Manihot esculenta HOM05D005137 ORTHO05D006478 1.6e-37 159.8 96 84.4
Migut.N03340 Erythranthe guttata HOM05D005137 ORTHO05D006478 5.3e-36 154.8 98 81.6
PGR004G0411 Punica granatum HOM05D005137 ORTHO05D006478 1.5e-35 153.3 98 79.6
SalBow6G2431 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.5e-35 153.3 97 81.4
SalBow6G5561 Salvia bowleyana HOM05D005137 ORTHO05D006478 1.5e-35 153.3 97 81.4
Cc10_g11140 Coffea canephora HOM05D005137 ORTHO05D006478 5.9e-35 151.4 97 80.4
Oeu039592.1 Olea europaea HOM05D005137 ORTHO05D006478 5.9e-35 151.4 96 81.2
Sabra13G0097100 Salix brachista HOM05D005137 ORTHO05D006478 5.9e-35 151.4 98 75.5
Oeu021007.1 Olea europaea HOM05D005137 ORTHO05D006478 7.7e-35 151.0 96 80.2
Cpa.g.sc66.58 Carica papaya HOM05D005137 ORTHO05D006478 1.0e-34 150.6 96 78.1
A08p08280 Brassica napus HOM05D005137 ORTHO05D006478 1.3e-34 150.2 98 73.5
Sp1g29570 Schrenkiella parvula HOM05D005137 ORTHO05D006478 1.3e-34 150.2 98 74.5
SGA_v2.0_scaffold149G36609 Striga asiatica HOM05D005137 ORTHO05D006478 1.3e-34 150.2 97 79.4
Nn5g27795 Nelumbo nucifera HOM05D005137 ORTHO05D006478 1.7e-34 149.8 96 76.0
unitig_52.g17664 Utricularia gibba HOM05D005137 ORTHO05D006478 1.7e-34 149.8 97 77.3
C06p11610 Brassica napus HOM05D005137 ORTHO05D006478 2.2e-34 149.4 98 73.5
Dinv41687 Davidia involucrata HOM05D005137 ORTHO05D006478 2.2e-34 149.4 98 77.6
BcaB03g13677 Brassica carinata HOM05D005137 ORTHO05D006478 3.8e-34 148.7 98 73.5
Carub.0001s3248 Capsella rubella HOM05D005137 ORTHO05D006478 3.8e-34 148.7 98 74.5
Atru.chr13.1812 Acer truncatum HOM05D005137 ORTHO05D006478 8.5e-34 147.5 98 74.5
AT1G34350 Arabidopsis thaliana HOM05D005137 ORTHO05D006478 8.5e-34 147.5 98 74.5
Cfa018205 Carpinus fangiana HOM05D005137 ORTHO05D006478 8.5e-34 147.5 98 75.5
Ciclev10002730m.g Citrus clementina HOM05D005137 ORTHO05D006478 8.5e-34 147.5 98 76.5
MD10G1046500 Malus domestica HOM05D005137 ORTHO05D006478 1.1e-33 147.1 98 77.6
Prupe.8G054100 Prunus persica HOM05D005137 ORTHO05D006478 1.1e-33 147.1 98 74.5
Eucgr.F04136 Eucalyptus grandis HOM05D005137 ORTHO05D006478 1.4e-33 146.7 98 75.5
TWI34G1514 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 1.4e-33 146.7 98 74.5
CSS0031544 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.9e-33 146.4 98 79.6
CSS0044586 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 1.9e-33 146.4 98 79.6
TAR628G0708 Trochodendron aralioides HOM05D005137 ORTHO05D006478 1.9e-33 146.4 96 72.9
MSTRG.22441 Avicennia marina HOM05D005137 ORTHO05D006478 2.5e-33 146.0 102 73.5
BcaB07g33131 Brassica carinata HOM05D005137 ORTHO05D006478 2.5e-33 146.0 98 70.4
AL1G48900 Arabidopsis lyrata HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 73.5
BcaC08g43783 Brassica carinata HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 70.4
BolC6t36295H Brassica oleracea HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 70.4
ECA248G1561 Erigeron canadensis HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 74.5
HanXRQChr01g0027021 Helianthus annuus HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 73.5
MD05G1040400 Malus domestica HOM05D005137 ORTHO05D006478 4.2e-33 145.2 98 76.5
CSS0049152 Camellia sinensis var. sinensis HOM05D005137 ORTHO05D006478 5.5e-33 144.8 98 78.6
AUR62023580 Chenopodium quinoa HOM05D005137 ORTHO05D006478 5.5e-33 144.8 98 74.5
FvH4_2g12231 Fragaria vesca HOM05D005137 ORTHO05D006478 5.5e-33 144.8 98 72.4
Glyma.09G166500 Glycine max HOM05D005137 ORTHO05D006478 5.5e-33 144.8 97 74.2
Thhalv10008956m.g Eutrema salsugineum HOM05D005137 ORTHO05D006478 7.2e-33 144.4 98 70.4
Potri.013G114800 Populus trichocarpa HOM05D005137 ORTHO05D006478 7.2e-33 144.4 96 71.9
CANSAT25G3131 Cannabis sativa HOM05D005137 ORTHO05D006478 9.4e-33 144.1 98 73.5
FAN20G1842 Fragaria x ananassa HOM05D005137 ORTHO05D006478 9.4e-33 144.1 98 72.4
Peaxi162Scf00105g01425 Petunia axillaris HOM05D005137 ORTHO05D006478 9.4e-33 144.1 84 88.1
RcHm_v2.0_Chr6g0272201 Rosa chinensis HOM05D005137 ORTHO05D006478 9.4e-33 144.1 98 72.4
Hund27077 Selenicereus undatus HOM05D005137 ORTHO05D006478 9.4e-33 144.1 102 69.6
Nitab4.5_0006579g0080 Nicotiana tabacum HOM05D005137 ORTHO05D006478 2.1e-32 142.9 76 92.1
Duzib177G1119 Durio zibethinus HOM05D005137 ORTHO05D006478 2.7e-32 142.5 96 76.0
Glyma.16G156600 Glycine max HOM05D005137 ORTHO05D006478 2.7e-32 142.5 97 72.2
Sed0020054 Sechium edule HOM05D005137 ORTHO05D006478 2.7e-32 142.5 98 70.4
Aqoxy5G03157 Aquilegia oxysepala HOM05D005137 ORTHO05D006478 3.6e-32 142.1 100 68.0
Gohir.A05G250700 Gossypium hirsutum HOM05D005137 ORTHO05D006478 3.6e-32 142.1 96 76.0
Sc01g0001710 Simmondsia chinensis HOM05D005137 ORTHO05D006478 3.6e-32 142.1 102 69.6
arahy.Tifrunner.gnm1.ann1.UQ6TGS Arachis hypogaea HOM05D005137 ORTHO05D006478 4.6e-32 141.7 98 71.4
CANSAT64G0780 Cannabis sativa HOM05D005137 ORTHO05D006478 4.6e-32 141.7 98 72.4
CsaV3_2G035870 Cucumis sativus L. HOM05D005137 ORTHO05D006478 4.6e-32 141.7 98 70.4
Lj1g0006567 Lotus japonicus HOM05D005137 ORTHO05D006478 4.6e-32 141.7 97 73.2
Psat5g109360 Pisum sativum HOM05D005137 ORTHO05D006478 4.6e-32 141.7 113 65.5
arahy.Tifrunner.gnm1.ann1.RF3N8D Arachis hypogaea HOM05D005137 ORTHO05D006478 6.1e-32 141.4 98 70.4
BcaC05g27759 Brassica carinata HOM05D005137 ORTHO05D006478 6.1e-32 141.4 98 70.4
C05p37550 Brassica napus HOM05D005137 ORTHO05D006478 6.1e-32 141.4 98 70.4
Gohir.D05G253100 Gossypium hirsutum HOM05D005137 ORTHO05D006478 6.1e-32 141.4 96 76.0
Potri.019G085500 Populus trichocarpa HOM05D005137 ORTHO05D006478 6.1e-32 141.4 98 70.4
THA.LOC104813096 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 6.1e-32 141.4 98 71.4
Duzib116G0364 Durio zibethinus HOM05D005137 ORTHO05D006478 1.0e-31 140.6 96 75.0
Glyma.02G074600 Glycine max HOM05D005137 ORTHO05D006478 1.0e-31 140.6 97 71.1
PSO210G7193 Papaver somniferum HOM05D005137 ORTHO05D006478 1.4e-31 140.2 95 74.7
THA.LOC104806781 Tarenaya hassleriana HOM05D005137 ORTHO05D006478 1.4e-31 140.2 98 71.4
VMungo0464G1968 Vigna mungo HOM05D005137 ORTHO05D006478 1.4e-31 140.2 97 72.2
MELO3C024753.2 Cucumis melo HOM05D005137 ORTHO05D006478 1.8e-31 139.8 98 68.4
FAN27G0578 Fragaria x ananassa HOM05D005137 ORTHO05D006478 1.8e-31 139.8 98 70.4
Gorai.009G263900 Gossypium raimondii HOM05D005137 ORTHO05D006478 1.8e-31 139.8 99 74.7
PSO238G0018 Papaver somniferum HOM05D005137 ORTHO05D006478 1.8e-31 139.8 95 73.7
TWI32G0414 Tripterygium wilfordii HOM05D005137 ORTHO05D006478 1.8e-31 139.8 98 71.4
Phvul.004G084500 Phaseolus vulgaris HOM05D005137 ORTHO05D006478 2.3e-31 139.4 95 72.6
EL10Ac1g00786 Beta vulgaris HOM05D005137 ORTHO05D006478 3.0e-31 139.0 102 67.6
DCAR_006419 Daucus carota HOM05D005137 ORTHO05D006478 3.0e-31 139.0 98 69.4
Thecc.08G201900 Theobroma cacao HOM05D005137 ORTHO05D006478 3.0e-31 139.0 98 72.4
Ca_16220_v3 Cicer arietinum L. HOM05D005137 ORTHO05D006478 3.9e-31 138.7 97 71.1
Medtr3g078663 Medicago truncatula HOM05D005137 ORTHO05D006478 3.9e-31 138.7 97 71.1
Lsat_1_v5_gn_1_53501 Lactuca sativa HOM05D005137 ORTHO05D006478 5.1e-31 138.3 96 70.8
Lalb_Chr01g0009971 Lupinus albus HOM05D005137 ORTHO05D006478 8.8e-31 137.5 97 70.1
CiPaw.15G082700 Carya illinoinensis HOM05D005137 ORTHO05D006478 1.1e-30 137.1 96 74.0
CDE05G2425 Ceratophyllum demersum HOM05D005137 ORTHO05D006478 1.1e-30 137.1 93 71.0
Aa31LG6G8420 Aethionema arabicum HOM05D005137 ORTHO05D006478 7.4e-30 134.4 107 61.7
ClCG02G007860 Citrullus lanatus HOM05D005137 ORTHO05D006478 9.7e-30 134.0 98 68.4
GSVIVG01023270001 Vitis vinifera HOM05D005137 ORTHO05D006478 9.7e-30 134.0 96 69.8
BolC8t47866H Brassica oleracea HOM05D005137 ORTHO05D006478 1.3e-29 133.7 119 58.0
BraA08t32846Z Brassica rapa HOM05D005137 ORTHO05D006478 1.3e-29 133.7 127 55.9
Lalb_Chr03g0035851 Lupinus albus HOM05D005137 ORTHO05D006478 1.3e-29 133.7 97 69.1
Hund16805 Selenicereus undatus HOM05D005137 ORTHO05D006478 1.3e-29 133.7 102 65.7
Haze_17904 Corylus avellana HOM05D005137 ORTHO05D006478 8.2e-29 131.0 122 60.7
Glyma.16G216600 Glycine max HOM05D005137 ORTHO05D006478 8.2e-29 131.0 97 69.1
ATR0584G018 Amborella trichopoda HOM05D005137 ORTHO05D006478 1.1e-28 130.6 98 68.4
BolC5t32496H Brassica oleracea HOM05D005137 ORTHO05D006478 2.6e-27 125.9 125 54.4
unitig_62.g23355 Utricularia gibba HOM05D005137 ORTHO05D006478 2.6e-27 125.9 79 77.2
Zm00001eb174480 Zea mays HOM05D005137 ORTHO05D006478 2.6e-27 125.9 97 63.9
QL02p034100 Quercus lobata HOM05D005137 ORTHO05D006478 5.9e-27 124.8 82 74.4
Medtr1g083990 Medicago truncatula HOM05D001444 ORTHO05D006478 1.7e-26 123.2 109 61.5
HPP92_025038 Vanilla planifolia HOM05D005137 ORTHO05D006478 2.2e-26 122.9 96 62.5
PSO063G4111 Papaver somniferum HOM05D005137 ORTHO05D006478 2.9e-26 122.5 95 64.2
Os08g0104100 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 6.5e-26 121.3 97 59.8
SEGI_32859 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 6.5e-26 121.3 98 63.3
SEGI_32911 Sequoiadendron giganteum HOM05D005137 ORTHO05D006478 6.5e-26 121.3 98 63.3
Lj7P297T42 Lonicera japonica HOM05D005137 ORTHO05D006478 2.5e-25 119.4 76 77.6
Rhsim06G0097400 Rhododendron simsii HOM05D005137 ORTHO05D006478 2.5e-25 119.4 75 78.7
AUR62004663 Chenopodium quinoa HOM05D005137 ORTHO05D006478 3.2e-25 119.0 97 63.9
COL.COLO4_35446 Corchorus olitorius HOM05D005137 ORTHO05D006478 2.1e-24 116.3 75 73.3
Os05g0432500 Oryza sativa ssp. japonica HOM05D005137 ORTHO05D006478 5.1e-23 111.7 96 53.1
SGA_v2.0_scaffold386G50489 Striga asiatica HOM05D005137 ORTHO05D006478 3.3e-22 109.0 90 64.4
Actinidia32879 Actinidia chinensis HOM05D005137 ORTHO05D006478 4.4e-22 108.6 80 71.2
Mapoly0118s0004 Marchantia polymorpha HOM05D005137 ORTHO05D006478 7.4e-22 107.8 103 54.4
AagrBONN_evm.TU.Sc2ySwM_117.1441 Anthoceros agrestis HOM05D005137 ORTHO05D006478 9.7e-22 107.5 97 54.6
SMO304G0014 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 1.3e-21 107.1 100 55.0
arahy.Tifrunner.gnm1.ann1.T3MISZ Arachis hypogaea HOM05D005137 ORTHO05D006478 2.8e-21 105.9 66 72.7
SMO115G0137 Selaginella moellendorffii HOM05D005137 ORTHO05D006478 8.2e-21 104.4 99 51.5
Pp3c12_6500 Physcomitrium patens HOM05D005137 ORTHO05D006478 3.1e-20 102.4 103 48.5
FAN24G3447 Fragaria x ananassa HOM05D004393 ORTHO05D004897 1.2e-19 100.5 73 67.1
CARHR033800 Cardamine hirsuta HOM05D005137 ORTHO05D006478 3.5e-19 99.0 74 67.6
Cre02.g142150 Chlamydomonas reinhardtii HOM05D005137 ORTHO05D006478 9.7e-14 80.9 97 46.4
arahy.Tifrunner.gnm1.ann1.84LCSI Arachis hypogaea HOM05D005137 ORTHO05D013367 1.8e-12 76.6 46 73.9
arahy.Tifrunner.gnm1.ann1.T6GVNL Arachis hypogaea HOM05D005137 ORTHO05D006478 7.0e-12 74.7 53 64.2
Medtr2g069440 Medicago truncatula HOM05D003000 ORTHO05D003699 2.9e-10 69.3 89 42.7
arahy.Tifrunner.gnm1.ann1.A3G9LL Arachis hypogaea HOM05D005137 ORTHO05D006478 8.5e-10 67.8 42 76.2
MCO05G717 Micromonas commoda HOM05D005137 ORTHO05D006478 3.2e-09 65.9 95 35.8
SGA_v2.0_scaffold1053G53813 Striga asiatica HOM05D005137 ORTHO05D006478 7.2e-09 64.7 68 54.4


User provided reference genes

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