Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G209.8 Capsicum annuum HOM05D000002 ORTHO05D000001 1.2e-109 399.8 199 100.0
CAN.G906.1 Capsicum annuum HOM05D000002 ORTHO05D000001 6.8e-12 75.1 127 39.4
CSS0046072 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-10 70.5 147 35.4
PSO832G2657 Papaver somniferum HOM05D000002 ORTHO05D000001 8.3e-10 68.2 124 37.9
Rhsim02G0093500 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.3e-10 68.2 72 50.0
Nn2g10460 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.1e-09 67.8 119 37.0
CSS0040082 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-09 66.6 137 37.2
CSS0015841 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-09 66.2 147 34.7
Rhsim09G0033700 Rhododendron simsii HOM05D000002 ORTHO05D000001 4.1e-09 65.9 72 48.6
Rhsim01G0080600 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.4e-09 65.5 72 48.6
Rhsim08G0049500 Rhododendron simsii HOM05D004871 ORTHO05D005755 9.2e-09 64.7 72 47.2
Nn4g24384 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.0e-08 63.5 130 34.6
Rhsim13G0212300 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.0e-08 63.5 142 37.3
Sopen11g010290 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 63.5 136 35.3
CSS0012618 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-08 62.8 61 52.5
CSS0024331 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.0e-08 62.0 64 51.6
CSS0025880 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 61.2 149 34.9
CSS0035415 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-07 61.2 123 34.1
CSS0048686 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-07 60.5 151 34.4
RhsimUnG0229000 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.6e-07 58.5 77 41.6
CSS0012950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-07 58.2 152 33.6
CSS0032896 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-07 58.2 69 42.0
CSS0050078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-07 58.2 150 34.0
Nn6g34560 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-06 57.4 131 32.8
Nn6g34561 Nelumbo nucifera HOM05D000002 ORTHO05D000001 1.5e-06 57.4 131 32.8
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 1.9e-06 57.0 154 31.2
Sopen01g009150 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.0 67 49.3
CSS0036759 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-06 56.6 40 57.5
CSS0039281 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-06 56.2 87 37.9
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-06 55.5 55 50.9
Nn1g06669 Nelumbo nucifera HOM05D000002 ORTHO05D000001 5.6e-06 55.5 66 45.5
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.5e-06 54.7 62 50.0


User provided reference genes

Program Settings