Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2081.2 Capsicum annuum HOM05D000007 ORTHO05D005385 3.9e-60 234.6 115 100.0
CAN.G2181.1 Capsicum annuum HOM05D000007 ORTHO05D005385 7.3e-51 203.8 107 94.4
CAN.G1201.5 Capsicum annuum HOM05D000007 ORTHO05D005385 3.9e-44 181.4 107 84.1
CAN.G11057.1 Capsicum annuum HOM05D000007 ORTHO05D005385 1.3e-42 176.4 107 83.2
CAN.G1333.15 Capsicum annuum HOM05D000007 ORTHO05D005385 1.3e-42 176.4 107 83.2
CAN.G1944.1 Capsicum annuum HOM05D000007 ORTHO05D005385 1.8e-41 172.6 107 82.2
CAN.G1607.3 Capsicum annuum HOM05D000007 ORTHO05D005385 1.2e-40 169.9 104 82.7
CAN.G1007.21 Capsicum annuum HOM05D000185 ORTHO05D005385 9.3e-38 160.2 107 78.5
CAN.G1201.3 Capsicum annuum HOM05D000007 ORTHO05D005385 9.3e-38 160.2 103 79.6
CAN.G2081.1 Capsicum annuum HOM05D000007 ORTHO05D005385 3.0e-36 155.2 113 72.6
CAN.G1800.6 Capsicum annuum HOM05D000007 ORTHO05D005385 3.3e-35 151.8 107 74.8
CAN.G1201.9 Capsicum annuum HOM05D000007 ORTHO05D005385 1.3e-31 139.8 108 66.7
CAN.G1800.3 Capsicum annuum HOM05D000007 ORTHO05D005385 3.8e-31 138.3 108 65.7
CAN.G1201.6 Capsicum annuum HOM05D000007 ORTHO05D005385 7.1e-30 134.0 108 63.9
PGSC0003DMG400038083 Solanum tuberosum HOM05D000007 ORTHO05D005385 2.9e-23 112.1 108 56.5
CAN.G1607.2 Capsicum annuum HOM05D000002 ORTHO05D005385 7.2e-22 107.5 105 55.2
CAN.G1904.1 Capsicum annuum HOM05D000007 ORTHO05D005385 7.2e-22 107.5 105 55.2
CAN.G1904.4 Capsicum annuum HOM05D000007 ORTHO05D005385 1.2e-21 106.7 105 55.2
PGSC0003DMG400035723 Solanum tuberosum HOM05D000007 ORTHO05D005385 6.1e-21 104.4 109 53.2
PGSC0003DMG400041009 Solanum tuberosum HOM05D000007 ORTHO05D005385 7.9e-21 104.0 103 55.3
CAN.G1904.2 Capsicum annuum HOM05D000007 ORTHO05D005385 1.1e-19 100.1 68 72.1
CAN.G1155.4 Capsicum annuum HOM05D000007 ORTHO05D005385 1.5e-19 99.8 108 51.9
Nitab4.5_0000792g0160 Nicotiana tabacum HOM05D000007 ORTHO05D005385 7.4e-19 97.4 101 48.5
Nitab4.5_0006461g0050 Nicotiana tabacum HOM05D000007 ORTHO05D005385 1.3e-18 96.7 101 49.5
Nitab4.5_0001418g0080 Nicotiana tabacum HOM05D000007 ORTHO05D005385 2.8e-18 95.5 111 44.1
CAN.G1635.1 Capsicum annuum HOM05D000007 ORTHO05D005385 4.1e-17 91.7 73 61.6
CAN.G1565.8 Capsicum annuum HOM05D000007 ORTHO05D005385 2.6e-16 89.0 109 46.8
CAN.G298.22 Capsicum annuum HOM05D000007 ORTHO05D005385 4.5e-16 88.2 108 46.3
CAN.G766.4 Capsicum annuum HOM05D000007 ORTHO05D005385 3.8e-15 85.1 99 49.5
PGSC0003DMG400046609 Solanum tuberosum HOM05D000007 ORTHO05D005385 1.4e-14 83.2 101 45.5
CAN.G1684.3 Capsicum annuum HOM05D000007 ORTHO05D005385 1.9e-14 82.8 106 50.0
PGSC0003DMG400037487 Solanum tuberosum HOM05D000007 ORTHO05D005385 2.5e-14 82.4 101 45.5
PGSC0003DMG400013435 Solanum tuberosum HOM05D000007 ORTHO05D005385 7.2e-14 80.9 93 44.1
CAN.G1796.1 Capsicum annuum HOM05D000007 ORTHO05D005385 1.4e-12 76.6 107 43.0
CAN.G1958.1 Capsicum annuum HOM05D000007 ORTHO05D005385 6.7e-12 74.3 90 46.7
CAN.G812.16 Capsicum annuum HOM05D000007 ORTHO05D005385 1.1e-11 73.6 90 46.7
Nitab4.5_0006210g0090 Nicotiana tabacum HOM05D000007 ORTHO05D005385 2.5e-11 72.4 110 41.8
PGSC0003DMG400026429 Solanum tuberosum HOM05D000007 ORTHO05D005385 1.3e-10 70.1 96 40.6
Nitab4.5_0007416g0100 Nicotiana tabacum HOM05D000007 ORTHO05D005385 2.2e-10 69.3 84 48.8
PGSC0003DMG400039553 Solanum tuberosum HOM05D000007 ORTHO05D005385 4.8e-10 68.2 100 45.0
Dinv29578 Davidia involucrata HOM05D000007 ORTHO05D005385 1.4e-09 66.6 89 37.1
CAN.G1796.2 Capsicum annuum HOM05D000007 ORTHO05D005385 3.1e-09 65.5 94 40.4
Hma1.2p1_0691F.1_g204065 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 6.9e-09 64.3 107 34.6
Migut.N00630 Erythranthe guttata HOM05D000007 ORTHO05D005385 3.4e-08 62.0 86 44.2
Migut.N00350 Erythranthe guttata HOM05D000007 ORTHO05D005385 7.7e-08 60.8 84 40.5
FvH4_2g33500 Fragaria vesca HOM05D000007 ORTHO05D000017 7.7e-08 60.8 78 41.0
Nitab4.5_0007416g0080 Nicotiana tabacum HOM05D000007 ORTHO05D005385 1.7e-07 59.7 86 45.3
CAN.G1201.7 Capsicum annuum HOM05D000007 ORTHO05D005385 2.2e-07 59.3 94 39.4
Migut.M00250 Erythranthe guttata HOM05D000007 ORTHO05D005385 2.2e-07 59.3 75 44.0
FvH4_1g18870 Fragaria vesca HOM05D000007 ORTHO05D000017 3.8e-07 58.5 76 44.7
Thecc.04G270700 Theobroma cacao HOM05D000007 ORTHO05D000017 3.8e-07 58.5 97 39.2
COL.COLO4_12871 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.0e-07 58.2 98 34.7
Migut.N00594 Erythranthe guttata HOM05D000007 ORTHO05D005385 5.0e-07 58.2 92 38.0
RcHm_v2.0_Chr5g0031741 Rosa chinensis HOM05D000007 ORTHO05D000039 8.5e-07 57.4 106 34.0
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 8.5e-07 57.4 98 39.8
Dinv29580 Davidia involucrata HOM05D000007 ORTHO05D005385 1.1e-06 57.0 81 37.0
Migut.L00550 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.1e-06 57.0 89 38.2
Migut.N00564 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.1e-06 57.0 89 37.1
Hma1.2p1_0187F.1_g081880 Hydrangea macrophylla HOM05D000007 ORTHO05D005385 1.1e-06 57.0 97 32.0
Lj2C989T8 Lonicera japonica HOM05D000007 ORTHO05D000039 1.4e-06 56.6 68 42.6
vmacro08249 Vaccinium macrocarpon HOM05D000845 ORTHO05D001925 1.4e-06 56.6 64 45.3
vmacro23506 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.4e-06 56.6 85 42.4
Migut.N00592 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.9e-06 56.2 89 38.2
Migut.N00608 Erythranthe guttata HOM05D000007 ORTHO05D005385 1.9e-06 56.2 95 36.8
Migut.N00587 Erythranthe guttata HOM05D000007 ORTHO05D005385 2.5e-06 55.8 63 42.9
Hma1.2p1_0187F.1_g081860 Hydrangea macrophylla HOM05D000007 ORTHO05D005385 2.5e-06 55.8 80 30.0
CiPaw.07G037900 Carya illinoinensis HOM05D000007 ORTHO05D000017 3.2e-06 55.5 68 41.2
Migut.H02219 Erythranthe guttata HOM05D000007 ORTHO05D005385 3.2e-06 55.5 89 37.1
Migut.N00599 Erythranthe guttata HOM05D000007 ORTHO05D005385 3.2e-06 55.5 61 42.6
Lj1g0023827 Lotus japonicus HOM05D000007 ORTHO05D000017 3.2e-06 55.5 92 37.0
CSS0042068 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.5e-06 54.7 98 35.7
CAN.G1034.48 Capsicum annuum HOM05D000007 ORTHO05D000017 5.5e-06 54.7 95 36.8
Ciclev10006809m.g Citrus clementina HOM05D000007 ORTHO05D000017 5.5e-06 54.7 95 34.7
Migut.N00396 Erythranthe guttata HOM05D000007 ORTHO05D005385 5.5e-06 54.7 101 34.7
Migut.N00583 Erythranthe guttata HOM05D000007 ORTHO05D005385 5.5e-06 54.7 89 37.1
TWI56G1392 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 5.5e-06 54.7 72 37.5
VMungo1215G3363 Vigna mungo HOM05D000007 ORTHO05D000017 5.5e-06 54.7 88 37.5
CAN.G1201.2 Capsicum annuum HOM05D000026 ORTHO05D007400 7.2e-06 54.3 73 42.5
CAN.G1652.19 Capsicum annuum HOM05D000007 ORTHO05D000017 7.2e-06 54.3 95 36.8
Duzib264G1130 Durio zibethinus HOM05D000007 ORTHO05D000039 7.2e-06 54.3 58 41.4
Migut.N00584 Erythranthe guttata HOM05D000007 ORTHO05D005385 7.2e-06 54.3 92 37.0
Glyma.08G098000 Glycine max HOM05D000007 ORTHO05D000017 7.2e-06 54.3 89 36.0
Peaxi162Scf00526g00073 Petunia axillaris HOM05D000007 ORTHO05D000017 7.2e-06 54.3 75 44.0
Thecc.04G270600 Theobroma cacao HOM05D000007 ORTHO05D000017 7.2e-06 54.3 92 39.1
CAN.G2485.2 Capsicum annuum HOM05D000007 ORTHO05D000017 9.4e-06 53.9 80 37.5
CAN.G567.38 Capsicum annuum HOM05D000007 ORTHO05D000017 9.4e-06 53.9 80 37.5
COL.COLO4_11925 Corchorus olitorius HOM05D000007 ORTHO05D000039 9.4e-06 53.9 78 37.2
Migut.J01328 Erythranthe guttata HOM05D000007 ORTHO05D005385 9.4e-06 53.9 61 47.5
Migut.L00546 Erythranthe guttata HOM05D000007 ORTHO05D005385 9.4e-06 53.9 84 38.1
Migut.N00326 Erythranthe guttata HOM05D000007 ORTHO05D005385 9.4e-06 53.9 95 36.8
Glyma.16G163966 Glycine max HOM05D000007 ORTHO05D000017 9.4e-06 53.9 89 36.0
PSO135G0864 Papaver somniferum HOM05D000007 ORTHO05D000039 9.4e-06 53.9 42 59.5
PSO724G0143 Papaver somniferum HOM05D000007 ORTHO05D000039 9.4e-06 53.9 42 59.5
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 9.4e-06 53.9 66 40.9
PGSC0003DMG400040613 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.4e-06 53.9 95 31.6
VMungo1215G3073 Vigna mungo HOM05D000007 ORTHO05D000017 9.4e-06 53.9 90 34.4


User provided reference genes

Program Settings