Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G2071.4 Capsicum annuum HOM05D003229 ORTHO05D003835 8.7e-130 467.2 283 100.0
Nitab4.5_0000875g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 8.6e-69 264.6 336 54.2
Nitab4.5_0013078g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 8.6e-69 264.6 336 53.9
Peaxi162Scf00355g00005 Petunia axillaris HOM05D003229 ORTHO05D003835 9.2e-63 244.6 199 68.3
Nitab4.5_0002498g0020 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.0e-53 213.0 270 47.4
Nitab4.5_0010116g0010 Nicotiana tabacum HOM05D003229 ORTHO05D003835 1.4e-50 204.1 273 45.8
PGSC0003DMG400005910 Solanum tuberosum HOM05D003229 ORTHO05D003835 4.9e-48 195.7 354 45.5
Solyc06g073810.4 Solanum lycopersicum HOM05D003229 ORTHO05D003835 1.1e-47 194.5 203 55.7
Sopen06g030210 Solanum pennellii HOM05D003229 ORTHO05D003835 4.2e-47 192.6 354 45.2
PGSC0003DMG400002995 Solanum tuberosum HOM05D003229 ORTHO05D003835 5.3e-42 175.6 258 43.8
CAN.G10408.1 Capsicum annuum HOM05D003229 ORTHO05D003835 4.6e-38 162.5 80 92.5
Solyc11g071690.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 1.8e-37 160.6 275 40.0
CAN.G916.7 Capsicum annuum HOM05D003658 ORTHO05D003835 1.3e-29 134.4 129 64.3
CAN.G481.58 Capsicum annuum HOM05D004333 ORTHO05D005363 3.3e-28 129.8 165 47.3
Peaxi162Scf01091g00018 Petunia axillaris HOM05D003229 ORTHO05D003835 1.6e-27 127.5 258 36.8
Cc01_g08150 Coffea canephora HOM05D003229 ORTHO05D003835 6.0e-22 109.0 279 32.3
Oeu048812.1 Olea europaea HOM05D003229 ORTHO05D003835 1.3e-21 107.8 310 31.9
Oeu048813.5 Olea europaea HOM05D003229 ORTHO05D003835 1.3e-21 107.8 310 31.9
MELO3C017380.2 Cucumis melo HOM05D003229 ORTHO05D003835 2.4e-18 97.1 55 74.5
MSTRG.12405 Avicennia marina HOM05D003229 ORTHO05D003835 6.9e-18 95.5 133 45.9
Oeu058180.2 Olea europaea HOM05D003229 ORTHO05D003835 9.0e-18 95.1 205 35.6
Sopen11g029360 Solanum pennellii HOM05D003229 ORTHO05D003835 2.0e-17 94.0 215 32.6
vmacro04054 Vaccinium macrocarpon HOM05D003229 ORTHO05D003835 2.0e-17 94.0 240 32.9
Actinidia12901 Actinidia chinensis HOM05D003229 ORTHO05D003835 5.9e-17 92.4 228 35.1
Hma1.2p1_0218F.1_g092270 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 2.2e-16 90.5 315 27.6
Migut.N02427 Erythranthe guttata HOM05D003229 ORTHO05D003835 6.5e-16 89.0 282 28.4
GSVIVG01037516001 Vitis vinifera HOM05D003229 ORTHO05D003835 8.5e-16 88.6 289 30.1
QL01p018824 Quercus lobata HOM05D003229 ORTHO05D003835 2.5e-15 87.0 305 29.5
AUR62001585 Chenopodium quinoa HOM05D003229 ORTHO05D003835 3.6e-14 83.2 210 31.4
Haze_23616 Corylus avellana HOM05D003229 ORTHO05D003835 3.6e-14 83.2 281 30.6
SGA_v2.0_scaffold16G07545 Striga asiatica HOM05D003229 ORTHO05D003835 4.6e-14 82.8 275 29.1
AUR62020197 Chenopodium quinoa HOM05D003229 ORTHO05D003835 3.0e-13 80.1 205 31.7
MBI11_g25050_MAGBIO Magnolia biondii HOM05D003229 ORTHO05D003835 5.1e-13 79.3 54 59.3
Duzib128G1455 Durio zibethinus HOM05D003229 ORTHO05D003835 5.7e-12 75.9 55 60.0
COL.COLO4_29455 Corchorus olitorius HOM05D003229 ORTHO05D003835 9.7e-12 75.1 55 60.0
THA.LOC104799740 Tarenaya hassleriana HOM05D003229 ORTHO05D003835 2.2e-11 73.9 55 52.7
Prupe.6G179900 Prunus persica HOM05D003229 ORTHO05D003835 2.8e-11 73.6 232 31.5
Rhsim13G0199400 Rhododendron simsii HOM05D003229 ORTHO05D003835 3.7e-11 73.2 136 41.9
Sc21g0006640 Simmondsia chinensis HOM05D003229 ORTHO05D003835 3.7e-11 73.2 316 26.3
Manes.04G063962 Manihot esculenta HOM05D003229 ORTHO05D003835 8.2e-11 72.0 51 62.7
Cpa.g.sc103.35 Carica papaya HOM05D003229 ORTHO05D003835 5.3e-10 69.3 277 26.4
Ciclev10011928m.g Citrus clementina HOM05D003229 ORTHO05D003835 9.1e-10 68.6 56 51.8
Thhalv10023543m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 1.5e-09 67.8 54 53.7
Gohir.A13G089500 Gossypium hirsutum HOM05D003229 ORTHO05D003835 2.0e-09 67.4 54 51.9
CSS0043544 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 2.6e-09 67.0 133 42.1
Dinv32144 Davidia involucrata HOM05D003229 ORTHO05D003835 2.6e-09 67.0 72 50.0
CiPaw.13G105300 Carya illinoinensis HOM05D003229 ORTHO05D003835 4.5e-09 66.2 72 47.2
Ciclev10028298m.g Citrus clementina HOM05D003229 ORTHO05D003835 5.9e-09 65.9 55 47.3
arahy.Tifrunner.gnm1.ann1.M286MP Arachis hypogaea HOM05D003229 ORTHO05D003835 7.7e-09 65.5 42 69.0
Lsat_1_v5_gn_0_39260 Lactuca sativa HOM05D003229 ORTHO05D003835 1.0e-08 65.1 72 45.8
Nn2g14458 Nelumbo nucifera HOM05D003229 ORTHO05D003835 1.0e-08 65.1 72 45.8
GSVIVG01022494001 Vitis vinifera HOM05D003229 ORTHO05D003835 1.0e-08 65.1 56 50.0
Duzib177G0022 Durio zibethinus HOM05D003229 ORTHO05D003835 1.3e-08 64.7 72 45.8
Gohir.D04G093700 Gossypium hirsutum HOM05D003229 ORTHO05D003835 1.3e-08 64.7 55 47.3
arahy.Tifrunner.gnm1.ann1.B3GIUW Arachis hypogaea HOM05D003229 ORTHO05D003835 1.7e-08 64.3 72 47.2
HanXRQChr05g0137001 Helianthus annuus HOM05D003229 ORTHO05D003835 2.2e-08 63.9 72 45.8
Cfa010230 Carpinus fangiana HOM05D003229 ORTHO05D003835 5.0e-08 62.8 73 49.3
ECA238G1805 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.0e-08 62.8 72 44.4
Sed0028007 Sechium edule HOM05D003229 ORTHO05D003835 6.5e-08 62.4 41 68.3
TWI79G1121 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 6.5e-08 62.4 82 40.2
Rhsim01G0198100 Rhododendron simsii HOM05D003229 ORTHO05D003835 8.5e-08 62.0 82 43.9
Gorai.009G396300 Gossypium raimondii HOM05D003229 ORTHO05D003835 1.1e-07 61.6 55 45.5
Ca_06127_v3 Cicer arietinum L. HOM05D003229 ORTHO05D003835 1.4e-07 61.2 47 59.6
TWI31G0893 Tripterygium wilfordii HOM05D003229 ORTHO05D003835 2.5e-07 60.5 72 44.4
CSS0028132 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 3.2e-07 60.1 94 42.6
CSS0045009 Camellia sinensis var. sinensis HOM05D003229 ORTHO05D003835 3.2e-07 60.1 94 42.6
Nitab4.5_0002595g0030 Nicotiana tabacum HOM05D003229 ORTHO05D003835 3.2e-07 60.1 55 47.3
Psat2g023800 Pisum sativum HOM05D003229 ORTHO05D003835 4.2e-07 59.7 46 56.5
Hund15039 Selenicereus undatus HOM05D003229 ORTHO05D003835 4.2e-07 59.7 53 47.2
Gorai.010G139700 Gossypium raimondii HOM05D003229 ORTHO05D003835 5.5e-07 59.3 72 38.9
Nitab4.5_0000117g0180 Nicotiana tabacum HOM05D003229 ORTHO05D003835 5.5e-07 59.3 55 47.3
Hund20968 Selenicereus undatus HOM05D003229 ORTHO05D003835 5.5e-07 59.3 133 37.6
Gohir.A13G086615 Gossypium hirsutum HOM05D003229 ORTHO05D003835 7.2e-07 58.9 72 38.9
Gohir.D13G092701 Gossypium hirsutum HOM05D003229 ORTHO05D003835 7.2e-07 58.9 72 38.9
Lj2C839T18 Lonicera japonica HOM05D003229 ORTHO05D003835 7.2e-07 58.9 72 44.4
TAR636G2352 Trochodendron aralioides HOM05D003229 ORTHO05D003835 7.2e-07 58.9 37 67.6
Thhalv10002930m.g Eutrema salsugineum HOM05D003229 ORTHO05D003835 9.4e-07 58.5 56 48.2
Lj2A839T58 Lonicera japonica HOM05D003229 ORTHO05D003835 9.4e-07 58.5 181 32.6
Solyc01g056760.3 Solanum lycopersicum HOM05D003229 ORTHO05D003835 9.4e-07 58.5 68 41.2
TPR.G13300 Trifolium pratense HOM05D003229 ORTHO05D003835 9.4e-07 58.5 46 58.7
Phvul.006G006900 Phaseolus vulgaris HOM05D003229 ORTHO05D003835 1.2e-06 58.2 81 38.3
Atru.chr8.1245 Acer truncatum HOM05D003229 ORTHO05D003835 1.6e-06 57.8 65 46.2
SGA_v2.0_scaffold82G26251 Striga asiatica HOM05D003229 ORTHO05D003835 2.1e-06 57.4 68 44.1
Glyma.13G028000 Glycine max HOM05D003229 ORTHO05D003835 2.7e-06 57.0 81 38.3
Hma1.2p1_0127F.1_g059620 Hydrangea macrophylla HOM05D003229 ORTHO05D003835 3.6e-06 56.6 80 38.8
Gohir.D13G092751 Gossypium hirsutum HOM05D003229 ORTHO05D003835 4.7e-06 56.2 72 38.9
Gorai.010G139800 Gossypium raimondii HOM05D003229 ORTHO05D003835 4.7e-06 56.2 72 38.9
Thecc.05G181700 Theobroma cacao HOM05D003229 ORTHO05D003835 6.1e-06 55.8 68 42.6
Duzib128G0535 Durio zibethinus HOM05D003229 ORTHO05D003835 7.9e-06 55.5 127 38.6
VMungo0540G0117 Vigna mungo HOM05D003229 ORTHO05D003835 7.9e-06 55.5 81 37.0


User provided reference genes

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