Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G207.4 Capsicum annuum HOM05D005635 ORTHO05D006838 8.6e-213 743.4 387 100.0
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 1.0e-144 517.3 377 72.7
Solyc03g059180.4 Solanum lycopersicum HOM05D005635 ORTHO05D006838 4.8e-139 498.4 375 72.3
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 7.0e-138 494.6 375 72.3
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 3.9e-88 329.3 378 56.9
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 5.1e-72 275.8 376 41.5
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 1.1e-71 274.6 376 42.3
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 3.3e-71 273.1 375 41.6
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 5.6e-71 272.3 266 62.4
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 2.1e-70 270.4 365 41.4
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 6.2e-70 268.9 376 39.6
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 2.0e-68 263.8 365 40.8
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 2.9e-67 260.0 372 40.6
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 2.9e-67 260.0 391 38.4
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 2.9e-67 260.0 391 38.4
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 1.6e-65 254.2 351 41.6
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 6.0e-65 252.3 378 38.9
Atru.chr4.1471 Acer truncatum HOM05D005635 ORTHO05D006838 1.3e-64 251.1 373 39.7
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 7.4e-63 245.4 370 38.4
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 2.8e-62 243.4 312 41.7
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 2.8e-62 243.4 379 38.0
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 8.2e-62 241.9 350 39.1
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 2.4e-61 240.4 367 38.7
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 5.9e-60 235.7 404 37.6
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 2.9e-59 233.4 383 37.6
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 1.1e-58 231.5 290 45.5
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 1.4e-58 231.1 337 38.6
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 5.5e-58 229.2 301 41.2
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 9.4e-58 228.4 347 38.9
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 6.1e-57 225.7 248 46.8
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 1.0e-56 224.9 373 34.9
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 1.1e-55 221.5 376 37.2
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 2.5e-55 220.3 375 36.3
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 2.5e-55 220.3 376 35.9
Oeu017118.1 Olea europaea HOM05D005635 ORTHO05D006838 4.3e-55 219.5 259 46.7
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 1.7e-54 217.6 311 38.6
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 2.2e-54 217.2 326 39.0
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 2.2e-54 217.2 290 39.7
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 2.2e-54 217.2 337 38.0
vmacro00684 Vaccinium macrocarpon HOM05D005635 ORTHO05D006838 4.8e-54 216.1 375 34.9
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 6.3e-54 215.7 379 35.4
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 8.2e-54 215.3 312 38.8
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 9.1e-53 211.8 375 34.9
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 1.5e-52 211.1 306 38.2
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 3.4e-52 209.9 406 33.3
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 3.4e-52 209.9 250 44.8
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 5.9e-52 209.1 330 36.7
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 2.2e-51 207.2 248 44.8
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 2.2e-51 207.2 346 35.3
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 1.1e-50 204.9 381 34.1
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 1.9e-50 204.1 248 44.0
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 5.5e-50 202.6 307 39.1
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 5.5e-50 202.6 375 33.6
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 1.6e-49 201.1 375 32.3
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 2.1e-49 200.7 364 35.2
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 2.1e-49 200.7 310 34.8
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 2.7e-49 200.3 248 44.4
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 7.9e-49 198.7 202 48.5
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 1.0e-48 198.4 260 41.5
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.0e-48 198.4 375 32.0
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 1.4e-48 198.0 241 45.2
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 2.3e-48 197.2 316 38.0
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 3.0e-48 196.8 356 35.1
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 3.9e-48 196.4 330 38.2
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 6.7e-48 195.7 375 33.3
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 8.8e-48 195.3 326 35.6
SalBow1G7464 Salvia bowleyana HOM05D005635 ORTHO05D006838 1.1e-47 194.9 296 37.2
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 2.0e-47 194.1 374 33.4
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 2.6e-47 193.7 319 36.1
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 3.3e-47 193.4 364 34.3
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 4.4e-47 193.0 292 38.0
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 7.4e-47 192.2 297 35.7
TPR.G17194 Trifolium pratense HOM05D005635 ORTHO05D006838 1.7e-46 191.0 297 37.7
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 2.2e-46 190.7 164 55.5
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 3.7e-46 189.9 361 34.6
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 4.8e-46 189.5 310 34.5
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 6.3e-46 189.1 360 32.5
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 1.8e-45 187.6 375 33.1
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 4.5e-44 183.0 376 33.8
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 7.7e-44 182.2 378 34.7
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 7.7e-44 182.2 376 33.8
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 1.3e-43 181.4 216 44.9
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 2.2e-43 180.6 376 33.5
PGR042G2382 Punica granatum HOM05D005635 ORTHO05D006838 8.5e-43 178.7 324 33.3
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 1.9e-42 177.6 304 33.9
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 3.2e-42 176.8 256 39.5
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.2e-42 176.4 356 33.1
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 7.2e-42 175.6 242 38.8
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 9.4e-42 175.3 166 50.0
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 4.7e-41 172.9 261 39.1
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 6.1e-41 172.6 355 34.1
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 1.8e-40 171.0 231 42.0
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 3.9e-40 169.9 140 57.1
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 1.4e-37 161.4 246 37.0
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 3.1e-37 160.2 368 32.9
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 1.6e-36 157.9 165 47.3
Carub.0005s2649 Capsella rubella HOM05D005635 ORTHO05D006838 2.6e-36 157.1 248 38.7
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 3.5e-36 156.8 403 30.0
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 1.0e-35 155.2 231 38.1
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 5.0e-35 152.9 408 29.4
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 1.8e-32 144.4 234 36.3
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 1.2e-31 141.7 250 36.8
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 1.9e-26 124.4 287 32.8
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 1.4e-21 108.2 170 40.0
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 7.0e-21 105.9 191 35.1
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 2.3e-19 100.9 147 37.4
Potri.014G182410 Populus trichocarpa HOM05D005635 ORTHO05D006838 2.6e-15 87.4 125 37.6
Atru.chr4.1500 Acer truncatum HOM05D005635 ORTHO05D006838 1.7e-14 84.7 246 28.9
Ca_19887_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 3.7e-14 83.6 100 44.0
CARHR151070 Cardamine hirsuta HOM05D005635 ORTHO05D006838 4.9e-14 83.2 196 33.2
AagrBONN_evm.TU.Sc2ySwM_344.4224 Anthoceros agrestis HOM05D005635 ORTHO05D006838 1.8e-13 81.3 169 30.8
Potri.019G098001 Populus trichocarpa HOM05D005635 ORTHO05D006838 1.6e-12 78.2 227 29.5
CARHR183720 Cardamine hirsuta HOM05D005635 ORTHO05D006838 1.5e-10 71.6 247 27.1
Atru.chr4.1499 Acer truncatum HOM05D005635 ORTHO05D006838 2.8e-09 67.4 39 71.8
CBR_g30747 Chara braunii HOM05D005635 ORTHO05D006838 1.5e-07 61.6 233 24.5


User provided reference genes

Program Settings