Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 3.0e-90 335.1 163 100.0
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 2.3e-58 229.2 120 93.3
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 5.7e-57 224.6 120 92.5
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.2e-51 206.8 118 83.9
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.6e-51 206.5 118 83.1
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 2.7e-51 205.7 121 79.3
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 6.7e-50 201.1 121 80.2
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.0e-49 199.5 120 80.0
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 2.0e-49 199.5 120 80.0
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 2.0e-49 199.5 118 82.2
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 2.6e-49 199.1 118 80.5
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 3.3e-49 198.7 118 80.5
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 3.7e-48 195.3 117 77.8
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 3.7e-48 195.3 117 77.8
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 8.2e-48 194.1 105 90.5
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 1.4e-47 193.4 121 76.9
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 1.4e-47 193.4 118 76.3
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 2.4e-47 192.6 118 78.8
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 4.1e-47 191.8 118 77.1
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 5.3e-47 191.4 118 73.7
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 5.3e-47 191.4 118 76.3
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 1.2e-46 190.3 117 76.9
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.2e-46 190.3 118 78.0
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 1.6e-46 189.9 119 75.6
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 2.0e-46 189.5 118 76.3
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 4.5e-46 188.3 119 74.8
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 1.0e-45 187.2 124 71.8
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 1.0e-45 187.2 118 75.4
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 2.2e-45 186.0 118 72.9
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.9e-45 185.7 116 76.7
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.8e-45 185.3 123 69.1
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 3.8e-45 185.3 122 72.1
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.8e-45 185.3 118 73.7
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 3.8e-45 185.3 121 70.2
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 5.0e-45 184.9 118 74.6
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.5e-45 184.5 126 71.4
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.1e-44 183.7 122 71.3
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.5e-44 183.3 122 68.0
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 1.9e-44 183.0 119 73.9
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.9e-44 183.0 121 74.4
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.2e-44 182.2 118 73.7
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 4.2e-44 181.8 118 72.0
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 7.2e-44 181.0 113 74.3
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.6e-43 179.9 105 81.0
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 1.6e-43 179.9 118 73.7
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 2.1e-43 179.5 118 70.3
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 2.1e-43 179.5 118 72.0
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 2.7e-43 179.1 135 68.1
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.7e-43 179.1 120 70.8
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 3.6e-43 178.7 118 72.9
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 6.1e-43 177.9 119 70.6
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 6.1e-43 177.9 119 70.6
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 6.1e-43 177.9 118 72.0
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 6.1e-43 177.9 126 67.5
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 6.1e-43 177.9 118 71.2
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 6.1e-43 177.9 118 71.2
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 8.0e-43 177.6 105 81.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 1.0e-42 177.2 122 68.0
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 1.8e-42 176.4 119 68.9
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 1.8e-42 176.4 119 68.9
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 1.8e-42 176.4 119 68.9
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.8e-42 176.4 118 70.3
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 2.3e-42 176.0 118 70.3
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 2.3e-42 176.0 118 70.3
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 3.0e-42 175.6 119 68.9
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 3.0e-42 175.6 119 69.7
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 3.0e-42 175.6 119 74.8
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 3.0e-42 175.6 118 69.5
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 4.0e-42 175.3 118 70.3
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 4.0e-42 175.3 124 67.7
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 5.2e-42 174.9 119 68.9
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 8.8e-42 174.1 118 69.5
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.2e-41 173.7 119 68.1
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 1.2e-41 173.7 124 68.5
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 2.0e-41 172.9 119 68.1
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 2.0e-41 172.9 119 68.1
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 2.6e-41 172.6 121 66.9
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 3.4e-41 172.2 119 68.1
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 3.4e-41 172.2 119 68.1
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 3.4e-41 172.2 119 68.1
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 3.4e-41 172.2 113 74.3
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 4.4e-41 171.8 119 68.1
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 5.7e-41 171.4 107 82.2
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 1.3e-40 170.2 119 68.9
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 1.7e-40 169.9 118 70.3
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 2.2e-40 169.5 143 63.6
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 3.7e-40 168.7 112 71.4
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 4.8e-40 168.3 135 63.0
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 6.3e-40 167.9 128 64.8
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 1.1e-39 167.2 118 67.8
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 1.1e-39 167.2 118 66.9
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 3.1e-39 165.6 119 66.4
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 7.0e-39 164.5 140 59.3
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 9.1e-39 164.1 113 69.9
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.7e-38 162.5 122 67.2
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 4.5e-38 161.8 129 62.0
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.7e-37 159.8 138 58.7
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 2.2e-37 159.5 113 69.0
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 6.5e-37 157.9 101 72.3
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 8.5e-37 157.5 81 96.3
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.1e-36 157.1 118 67.8
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 1.5e-36 156.8 135 60.0
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 1.5e-36 156.8 101 72.3
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 1.5e-36 156.8 131 61.1
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.2e-35 153.7 101 71.3
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 3.6e-35 152.1 118 62.7
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.3e-34 149.4 213 43.2
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 3.0e-34 149.1 118 63.6
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 4.4e-33 145.2 101 65.3
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 2.8e-32 142.5 74 94.6
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 3.7e-32 142.1 129 52.7
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 1.8e-31 139.8 118 61.0
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 2.7e-30 136.0 82 76.8
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 5.0e-29 131.7 106 61.3
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 6.6e-29 131.3 88 70.5
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 5.5e-28 128.3 109 62.4
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 3.6e-27 125.6 68 80.9
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 4.5e-22 108.6 121 44.6
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 4.5e-22 108.6 67 73.1
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 7.8e-22 107.8 67 73.1
BraA10t44460Z Brassica rapa HOM05D006084 ORTHO05D007449 6.6e-21 104.8 89 59.6
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 1.2e-19 100.5 81 53.1
MELO3C033557.2 Cucumis melo HOM05D006084 ORTHO05D007449 8.0e-19 97.8 186 37.6
arahy.Tifrunner.gnm1.ann1.2H702Y Arachis hypogaea HOM05D006084 ORTHO05D007449 4.4e-17 92.0 61 70.5
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 4.4e-17 92.0 117 38.5
Os01g0339600 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 9.8e-17 90.9 70 64.3
Dinv35076 Davidia involucrata HOM05D006084 ORTHO05D007449 1.6e-14 83.6 45 84.4
SEGI_25092 Sequoiadendron giganteum HOM05D006084 ORTHO05D007449 4.7e-11 72.0 46 65.2
A10p23960 Brassica napus HOM05D006084 ORTHO05D007449 5.8e-09 65.1 131 36.6
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 1.2e-06 57.4 106 32.1


User provided reference genes

Program Settings