Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 2.0e-49 198.7 98 100.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.2e-30 136.3 98 76.5
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 5.1e-29 131.0 98 74.5
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.1e-28 129.8 93 74.2
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 8.5e-24 113.6 102 65.7
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.2e-19 99.0 102 54.9
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.2e-19 99.0 102 54.9
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 1.4e-18 96.3 68 69.1
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 9.1e-18 93.6 87 60.9
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.2e-17 93.2 87 58.6
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 1.6e-17 92.8 87 58.6
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 2.0e-17 92.4 103 53.4
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 2.6e-17 92.0 95 53.7
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 2.2e-16 89.0 96 52.1
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.9e-16 88.6 54 74.1
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 3.8e-16 88.2 98 55.1
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.5e-15 86.3 81 54.3
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.9e-15 85.9 96 51.0
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.9e-15 85.9 94 50.0
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 2.5e-15 85.5 91 54.9
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 3.2e-15 85.1 59 64.4
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 5.5e-15 84.3 63 71.4
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 7.2e-15 84.0 53 81.1
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 7.2e-15 84.0 58 70.7
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 9.4e-15 83.6 91 51.6
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 9.4e-15 83.6 95 52.6
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 1.6e-14 82.8 74 59.5
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 4.7e-14 81.3 65 58.5
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 8.0e-14 80.5 93 48.4
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 1.8e-13 79.3 92 42.4
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.8e-13 79.3 92 46.7
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.3e-13 79.0 90 47.8
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.3e-13 79.0 61 60.7
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.0e-13 78.6 99 48.5
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 3.0e-13 78.6 63 58.7
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 4.0e-13 78.2 93 49.5
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 6.8e-13 77.4 98 41.8
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 8.8e-13 77.0 97 49.5
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 8.8e-13 77.0 93 45.2
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 8.8e-13 77.0 69 50.7
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 8.8e-13 77.0 57 66.7
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 8.8e-13 77.0 91 50.5
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 1.5e-12 76.3 58 60.3
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 1.5e-12 76.3 53 66.0
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 1.5e-12 76.3 92 44.6
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 1.5e-12 76.3 83 50.6
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 3.4e-12 75.1 56 64.3
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 4.4e-12 74.7 57 63.2
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 7.5e-12 73.9 100 46.0
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 9.8e-12 73.6 65 56.9
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.3e-11 73.2 59 61.0
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 1.7e-11 72.8 71 54.9
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 2.2e-11 72.4 65 56.9
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 2.8e-11 72.0 60 60.0
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.7e-11 71.6 97 42.3
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 3.7e-11 71.6 65 56.9
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 4.8e-11 71.2 91 40.7
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 4.8e-11 71.2 85 48.2
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 4.8e-11 71.2 96 42.7
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 8.3e-11 70.5 94 47.9
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.1e-10 70.1 59 59.3
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 1.4e-10 69.7 97 46.4
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 1.8e-10 69.3 97 40.2
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.8e-10 69.3 97 40.2
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.8e-10 69.3 97 40.2
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 7.0e-10 67.4 59 52.5
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 7.0e-10 67.4 96 38.5
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 7.0e-10 67.4 66 56.1
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 7.0e-10 67.4 63 61.9
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 7.0e-10 67.4 44 68.2
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 9.1e-10 67.0 58 58.6
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 9.1e-10 67.0 67 52.2
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 9.1e-10 67.0 96 40.6
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 9.1e-10 67.0 61 57.4
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 2.0e-09 65.9 56 57.1
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 5.9e-09 64.3 56 58.9
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 5.9e-09 64.3 53 60.4
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 1.0e-08 63.5 60 56.7
CDE10G0216 Ceratophyllum demersum HOM05D001577 ORTHO05D008017 1.7e-08 62.8 59 50.8
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.2e-08 62.4 102 45.1
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 2.9e-08 62.0 39 79.5
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 3.8e-08 61.6 98 40.8
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 5.0e-08 61.2 69 50.7
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 6.5e-08 60.8 99 36.4
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 1.9e-07 59.3 82 42.7
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.5e-07 58.9 71 46.5
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 2.5e-07 58.9 103 39.8
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 3.2e-07 58.5 94 38.3
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 3.2e-07 58.5 77 42.9
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 4.2e-07 58.2 105 40.0
BcaC02g09685 Brassica carinata HOM05D007413 ORTHO05D009357 4.2e-07 58.2 71 45.1
C04p45600 Brassica napus HOM05D007413 ORTHO05D009357 4.2e-07 58.2 71 45.1
BolC4t26142H Brassica oleracea HOM05D007413 ORTHO05D009357 4.2e-07 58.2 71 45.1
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 4.2e-07 58.2 101 39.6
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 5.5e-07 57.8 104 40.4
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 7.2e-07 57.4 70 45.7
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 9.4e-07 57.0 97 38.1
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 9.4e-07 57.0 70 45.7
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 9.4e-07 57.0 99 35.4
Gohir.A05G318400 Gossypium hirsutum HOM05D008443 ORTHO05D010587 9.4e-07 57.0 64 50.0
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.1e-06 55.8 70 42.9
HPP92_023631 Vanilla planifolia HOM05D007413 ORTHO05D009357 2.1e-06 55.8 66 45.5
COL.COLO4_06805 Corchorus olitorius HOM05D011714 ORTHO05D011286 6.1e-06 54.3 66 43.9
MBI07_g21782_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 6.1e-06 54.3 62 41.9
MBI07_g41313_MAGBIO Magnolia biondii HOM05D006973 ORTHO05D008636 6.1e-06 54.3 62 41.9
A04p11950 Brassica napus HOM05D007413 ORTHO05D009357 8.0e-06 53.9 106 36.8
BraA04t16860Z Brassica rapa HOM05D007413 ORTHO05D009357 8.0e-06 53.9 106 36.8


User provided reference genes

Program Settings