Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G206.208 Capsicum annuum HOM05D009591 ORTHO05D000101 1.5e-74 282.7 140 100.0
CAN.G206.206 Capsicum annuum HOM05D009591 ORTHO05D000101 3.5e-31 138.7 109 69.7
PGSC0003DMG400001445 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.8e-30 136.3 134 56.0
PGSC0003DMG400045426 Solanum tuberosum HOM05D000171 ORTHO05D000101 4.2e-16 88.6 125 44.0
PGSC0003DMG400041815 Solanum tuberosum HOM05D000171 ORTHO05D000101 7.9e-15 84.3 135 39.3
PGSC0003DMG400025676 Solanum tuberosum HOM05D000171 ORTHO05D000101 1.1e-13 80.5 123 43.1
PGSC0003DMG400038445 Solanum tuberosum HOM05D000171 ORTHO05D000101 7.4e-13 77.8 130 35.4
PGSC0003DMG400043442 Solanum tuberosum HOM05D000171 ORTHO05D000101 4.8e-12 75.1 126 37.3
PGSC0003DMG400026777 Solanum tuberosum HOM05D009591 ORTHO05D000101 6.3e-12 74.7 131 38.2
PGSC0003DMG400025675 Solanum tuberosum HOM05D000171 ORTHO05D000101 8.2e-12 74.3 133 41.4
PGSC0003DMG400036653 Solanum tuberosum HOM05D000171 ORTHO05D000101 5.3e-11 71.6 137 38.7
PGSC0003DMG400047325 Solanum tuberosum HOM05D000171 ORTHO05D000101 5.3e-11 71.6 116 36.2
CAN.G128.136 Capsicum annuum HOM05D000171 ORTHO05D000101 5.9e-10 68.2 140 36.4
CAN.G18.21 Capsicum annuum HOM05D009591 ORTHO05D000101 1.3e-09 67.0 132 39.4
Peaxi162Scf00918g00057 Petunia axillaris HOM05D009591 ORTHO05D000101 1.4e-08 63.5 131 33.6
Thhalv10019615m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 2.5e-08 62.8 143 35.7
Nitab4.5_0000471g0120 Nicotiana tabacum HOM05D009591 ORTHO05D000101 2.5e-08 62.8 118 36.4
CAN.G1201.10 Capsicum annuum HOM05D022910 ORTHO05D000101 5.5e-08 61.6 100 39.0
AL1G45580 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.6e-07 60.1 141 31.2
AUR62015025 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.6e-07 60.1 122 32.8
Thhalv10019649m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.6e-07 60.1 160 30.6
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 2.1e-07 59.7 126 33.3
QL03p024057 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-07 59.7 132 33.3
PGSC0003DMG400017451 Solanum tuberosum HOM05D009591 ORTHO05D000101 2.1e-07 59.7 64 50.0
CARHR276640 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.7e-07 59.3 136 29.4
Prupe.3G191300 Prunus persica HOM05D000007 ORTHO05D000017 2.7e-07 59.3 135 31.1
AL1G45610 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.6e-07 58.9 143 32.2
CAN.G158.32 Capsicum annuum HOM05D000171 ORTHO05D000101 4.6e-07 58.5 118 39.0
C04p46150 Brassica napus HOM05D000171 ORTHO05D000101 6.1e-07 58.2 122 32.8
QL04p018974 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-07 58.2 139 32.4
A04p12430 Brassica napus HOM05D000171 ORTHO05D000101 7.9e-07 57.8 122 32.0
PGSC0003DMG400018170 Solanum tuberosum HOM05D013992 ORTHO05D011565 7.9e-07 57.8 125 36.0
Thhalv10023110m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-06 57.4 129 31.8
Ciclev10003993m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.3e-06 57.0 143 32.2
Manes.04G117800 Manihot esculenta HOM05D000007 ORTHO05D000017 1.3e-06 57.0 131 29.0
Nitab4.5_0008081g0010 Nicotiana tabacum HOM05D009591 ORTHO05D000101 1.3e-06 57.0 70 48.6
Solyc09g091220.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.3e-06 57.0 132 31.8
Ciclev10003618m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.8e-06 56.6 148 29.7
Eucgr.H02696 Eucalyptus grandis HOM05D000007 ORTHO05D000017 1.8e-06 56.6 129 33.3
CARHR148710 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.3e-06 56.2 150 30.7
FAN16G0738 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.3e-06 56.2 128 33.6
Gohir.A02G123901 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.3e-06 56.2 128 32.8
Psat0s7414g0040 Pisum sativum HOM05D000007 ORTHO05D000039 2.3e-06 56.2 142 29.6
Psat2g002840 Pisum sativum HOM05D000007 ORTHO05D000039 2.3e-06 56.2 142 29.6
BolC3t18120H Brassica oleracea HOM05D000171 ORTHO05D000101 3.0e-06 55.8 142 26.1
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.0e-06 55.8 144 30.6
MD04G1162000 Malus domestica HOM05D000007 ORTHO05D000017 3.0e-06 55.8 148 29.7
MD09G1135400 Malus domestica HOM05D000007 ORTHO05D000017 3.0e-06 55.8 133 34.6
Aqoxy1G04045 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.9e-06 55.5 126 31.7
Aqoxy4G00158 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.9e-06 55.5 177 29.4
Aqoxy5G00285 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.9e-06 55.5 143 31.5
AL8G39860 Arabidopsis lyrata HOM05D016076 ORTHO05D012581 3.9e-06 55.5 136 30.9
Ciclev10011877m.g Citrus clementina HOM05D000007 ORTHO05D000017 3.9e-06 55.5 121 33.1
Lju41C15G6 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-06 55.5 125 30.4
Lj5g0004910 Lotus japonicus HOM05D000007 ORTHO05D000017 3.9e-06 55.5 137 31.4
Oeu004911.1 Olea europaea HOM05D000007 ORTHO05D000017 3.9e-06 55.5 131 34.4
Potri.017G058900 Populus trichocarpa HOM05D000007 ORTHO05D000017 3.9e-06 55.5 126 35.7
QL04p019005 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-06 55.5 131 29.0
QL04p045611 Quercus lobata HOM05D000007 ORTHO05D000039 3.9e-06 55.5 135 31.9
TWI81G0714 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.9e-06 55.5 126 34.9
AL3G47620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-06 55.1 123 32.5
AUR62016933 Chenopodium quinoa HOM05D000007 ORTHO05D000017 5.1e-06 55.1 130 31.5
Ciclev10030112m.g Citrus clementina HOM05D000007 ORTHO05D000017 5.1e-06 55.1 128 34.4
COL.COLO4_09297 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.1e-06 55.1 119 29.4
FvH4_6g01270 Fragaria vesca HOM05D000007 ORTHO05D046297 5.1e-06 55.1 154 29.2
Lj3A538T48 Lonicera japonica HOM05D000007 ORTHO05D000017 5.1e-06 55.1 147 27.9
BraA04t16906Z Brassica rapa HOM05D000171 ORTHO05D000101 6.7e-06 54.7 122 31.1
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 6.7e-06 54.7 139 30.9
Eucgr.H02694 Eucalyptus grandis HOM05D000007 ORTHO05D000017 6.7e-06 54.7 126 33.3
QL04p019179 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-06 54.7 128 33.6
Sabra17G0052300 Salix brachista HOM05D000007 ORTHO05D000017 6.7e-06 54.7 130 36.9
Sabra17G0052500 Salix brachista HOM05D000007 ORTHO05D000017 6.7e-06 54.7 130 36.9
Atru.chr3.3209 Acer truncatum HOM05D000007 ORTHO05D007631 8.7e-06 54.3 120 35.8
CAN.G588.77 Capsicum annuum HOM05D013992 ORTHO05D011565 8.7e-06 54.3 128 29.7
AUR62014755 Chenopodium quinoa HOM05D000007 ORTHO05D000017 8.7e-06 54.3 129 34.9
FvH4_3g15810 Fragaria vesca HOM05D000007 ORTHO05D000017 8.7e-06 54.3 128 32.8
FAN11G2222 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.7e-06 54.3 128 32.8
FAN21G0181 Fragaria x ananassa HOM05D000007 ORTHO05D000017 8.7e-06 54.3 128 32.8
FAN26G3325 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.7e-06 54.3 147 29.9
Psat3g146480 Pisum sativum HOM05D000007 ORTHO05D000017 8.7e-06 54.3 146 31.5


User provided reference genes

Program Settings